BLASTX nr result
ID: Aconitum21_contig00015984
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Aconitum21_contig00015984
(454 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAS79547.1| At4g11080 [Arabidopsis thaliana] gi|46367464|emb|... 81 1e-19
ref|XP_002874673.1| hypothetical protein ARALYDRAFT_489947 [Arab... 80 4e-19
ref|NP_192846.1| HMG (high mobility group) box protein [Arabidop... 80 2e-18
gb|AAC35540.1| contains similarity to HMG (high mobility group) ... 80 2e-18
ref|NP_194111.1| HMG (high mobility group) box protein [Arabidop... 77 3e-18
>gb|AAS79547.1| At4g11080 [Arabidopsis thaliana] gi|46367464|emb|CAG25858.1|
hypothetical protein [Arabidopsis thaliana]
Length = 450
Score = 80.9 bits (198), Expect(2) = 1e-19
Identities = 39/67 (58%), Positives = 47/67 (70%)
Frame = -1
Query: 454 CKDNWNEVKKENPNAEFKDIPNILSEKWKMLSXXXXXXXXXXXQDDKEAYLQIVGKEKCK 275
CKDNWNEVKK+NP+A+FK+ NIL KWK +S Q DKEAYLQ++ KEK +
Sbjct: 144 CKDNWNEVKKQNPDADFKETSNILGAKWKGISAEEKKPYEEKYQADKEAYLQVITKEKRE 203
Query: 274 NEAMKLL 254
EAMKLL
Sbjct: 204 REAMKLL 210
Score = 40.0 bits (92), Expect(2) = 1e-19
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Frame = -3
Query: 215 EQYLHQTGSR*IDCRKHNEEESQERKRSIET-----EAISICFLCVHERVVCRLG*RNQN 51
+QYLH + E++++++ + I+ + IS + +ER G N++
Sbjct: 224 DQYLHFV--------QEGEQDNKKKAKKIKDPLKPKQPISAYLIYANERRAALKG-ENKS 274
Query: 50 VSEIAKITGEEWKNMS 3
V E+AKITGEEWKN+S
Sbjct: 275 VIEVAKITGEEWKNLS 290
>ref|XP_002874673.1| hypothetical protein ARALYDRAFT_489947 [Arabidopsis lyrata subsp.
lyrata] gi|297320510|gb|EFH50932.1| hypothetical protein
ARALYDRAFT_489947 [Arabidopsis lyrata subsp. lyrata]
Length = 448
Score = 80.5 bits (197), Expect(2) = 4e-19
Identities = 39/67 (58%), Positives = 46/67 (68%)
Frame = -1
Query: 454 CKDNWNEVKKENPNAEFKDIPNILSEKWKMLSXXXXXXXXXXXQDDKEAYLQIVGKEKCK 275
CKDNWN+VKKENP A+FK+ NIL KW+ LS Q DKEAYLQ++ KEK +
Sbjct: 142 CKDNWNDVKKENPEADFKETSNILGAKWRTLSVEEKKFYEEKYQVDKEAYLQVITKEKRE 201
Query: 274 NEAMKLL 254
EAMKLL
Sbjct: 202 REAMKLL 208
Score = 38.9 bits (89), Expect(2) = 4e-19
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = -3
Query: 215 EQYLHQTGSR*IDCRKHNEEESQERKRSIETE-AISICFLCVHERVVCRLG*RNQNVSEI 39
+QYLH + + N++++++ K ++ + IS + +ER G N++V E+
Sbjct: 222 DQYLHFVQ----EAEQDNKKKAKKIKDPLKPKHPISAYLIYANERRAALKG-ENKSVIEV 276
Query: 38 AKITGEEWKNMS 3
AK+TGEEWKN+S
Sbjct: 277 AKMTGEEWKNLS 288
>ref|NP_192846.1| HMG (high mobility group) box protein [Arabidopsis thaliana]
gi|75266789|sp|Q9T012.1|HMG13_ARATH RecName: Full=High
mobility group B protein 13; AltName:
Full=Nucleosome/chromatin assembly factor group D 13
gi|4850287|emb|CAB43043.1| 98b like protein [Arabidopsis
thaliana] gi|7267807|emb|CAB81209.1| 98b like protein
[Arabidopsis thaliana] gi|22136604|gb|AAM91621.1|
putative 98b protein [Arabidopsis thaliana]
gi|332657570|gb|AEE82970.1| HMG (high mobility group)
box protein [Arabidopsis thaliana]
Length = 446
Score = 80.5 bits (197), Expect(2) = 2e-18
Identities = 39/67 (58%), Positives = 46/67 (68%)
Frame = -1
Query: 454 CKDNWNEVKKENPNAEFKDIPNILSEKWKMLSXXXXXXXXXXXQDDKEAYLQIVGKEKCK 275
CKDNWNEVKK+NP A+FK+ NIL KWK +S Q DKEAYLQ++ KEK +
Sbjct: 140 CKDNWNEVKKQNPEADFKETSNILGAKWKGISAEEKKPYEEKYQADKEAYLQVITKEKRE 199
Query: 274 NEAMKLL 254
EAMKLL
Sbjct: 200 REAMKLL 206
Score = 36.6 bits (83), Expect(2) = 2e-18
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = -3
Query: 215 EQYLHQTGSR*IDCRKHNEEESQERKRSIET-EAISICFLCVHERVVCRLG*RNQNVSEI 39
+QYLH + N++++++ K ++ + IS + +ER G N++V E+
Sbjct: 220 DQYLHFVQ----EAEHDNKKKAKKIKDPLKPKQPISAYLIYANERRAALKG-ENKSVIEV 274
Query: 38 AKITGEEWKNMS 3
AK+ GEEWKN+S
Sbjct: 275 AKMAGEEWKNLS 286
>gb|AAC35540.1| contains similarity to HMG (high mobility group) box (Pfam:
HMG_box.hmm, scores: 70.67, 53.09 and 80.15)
[Arabidopsis thaliana]
Length = 401
Score = 80.5 bits (197), Expect(2) = 2e-18
Identities = 39/67 (58%), Positives = 46/67 (68%)
Frame = -1
Query: 454 CKDNWNEVKKENPNAEFKDIPNILSEKWKMLSXXXXXXXXXXXQDDKEAYLQIVGKEKCK 275
CKDNWNEVKK+NP A+FK+ NIL KWK +S Q DKEAYLQ++ KEK +
Sbjct: 152 CKDNWNEVKKQNPEADFKETSNILGAKWKGISAEEKKPYEEKYQADKEAYLQVITKEKRE 211
Query: 274 NEAMKLL 254
EAMKLL
Sbjct: 212 REAMKLL 218
Score = 36.6 bits (83), Expect(2) = 2e-18
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = -3
Query: 215 EQYLHQTGSR*IDCRKHNEEESQERKRSIET-EAISICFLCVHERVVCRLG*RNQNVSEI 39
+QYLH + N++++++ K ++ + IS + +ER G N++V E+
Sbjct: 232 DQYLHFVQ----EAEHDNKKKAKKIKDPLKPKQPISAYLIYANERRAALKG-ENKSVIEV 286
Query: 38 AKITGEEWKNMS 3
AK+ GEEWKN+S
Sbjct: 287 AKMAGEEWKNLS 298
>ref|NP_194111.1| HMG (high mobility group) box protein [Arabidopsis thaliana]
gi|75266376|sp|Q9SUP7.1|HMGB6_ARATH RecName: Full=High
mobility group B protein 6; AltName:
Full=Nucleosome/chromatin assembly factor group D 06;
Short=Nucleosome/chromatin assembly factor group D 6;
AltName: Full=WRKY transcription factor 53;
Short=AtWRKY53; Short=WRKY DNA-binding protein 53
gi|4454049|emb|CAA23046.1| 98b like protein [Arabidopsis
thaliana] gi|7269229|emb|CAB81298.1| 98b like protein
[Arabidopsis thaliana] gi|18377799|gb|AAL67049.1|
putative 98b protein [Arabidopsis thaliana]
gi|20465867|gb|AAM20038.1| putative 98b protein
[Arabidopsis thaliana] gi|22022506|gb|AAM83212.1|
putative 98b protein [Arabidopsis thaliana]
gi|332659407|gb|AEE84807.1| HMG (high mobility group)
box protein [Arabidopsis thaliana]
Length = 456
Score = 77.4 bits (189), Expect(2) = 3e-18
Identities = 38/67 (56%), Positives = 44/67 (65%)
Frame = -1
Query: 454 CKDNWNEVKKENPNAEFKDIPNILSEKWKMLSXXXXXXXXXXXQDDKEAYLQIVGKEKCK 275
CKD W EVKKENP A+FK+ NIL KWK LS Q +KEAYLQ++ KEK +
Sbjct: 149 CKDQWTEVKKENPEADFKETSNILGAKWKSLSAEDKKPYEERYQVEKEAYLQVIAKEKRE 208
Query: 274 NEAMKLL 254
EAMKLL
Sbjct: 209 KEAMKLL 215
Score = 39.3 bits (90), Expect(2) = 3e-18
Identities = 26/71 (36%), Positives = 35/71 (49%)
Frame = -3
Query: 215 EQYLHQTGSR*IDCRKHNEEESQERKRSIETEAISICFLCVHERVVCRLG*RNQNVSEIA 36
+QYL+ D +K N++E K A FL L N++V E+A
Sbjct: 229 DQYLNFVQEAEQDNKKKNKKEKDPLKPKHPVSA----FLVYANERRAALREENKSVVEVA 284
Query: 35 KITGEEWKNMS 3
KITGEEWKN+S
Sbjct: 285 KITGEEWKNLS 295