BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00015836
         (1236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138378.1| PREDICTED: DNA excision repair protein ERCC-...   352   1e-94
ref|XP_004167258.1| PREDICTED: DNA excision repair protein ERCC-...   348   2e-93
ref|XP_002281063.2| PREDICTED: DNA excision repair protein ERCC-...   347   4e-93
ref|XP_002512344.1| excision repair cross-complementing 1 ercc1,...   345   1e-92
ref|XP_002328427.1| predicted protein [Populus trichocarpa] gi|2...   345   2e-92

>ref|XP_004138378.1| PREDICTED: DNA excision repair protein ERCC-1-like [Cucumis sativus]
          Length = 391

 Score =  352 bits (902), Expect = 1e-94
 Identities = 177/263 (67%), Positives = 206/263 (78%), Gaps = 5/263 (1%)
 Frame = +1

Query: 301  HIRNVKWVFADIVCDYLIGQNSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRXXXXXXX 480
            HIRNV+W FAD+V DYL+GQ+SCALYLSLRYHLLHPDYLYYRIRELQKNFKLR       
Sbjct: 127  HIRNVRWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVILCHVD 186

Query: 481  XXXXXKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLLQGQMDTDYLSR 660
                 KPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADL+QG MDTDYLSR
Sbjct: 187  VEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMDTDYLSR 246

Query: 661  MNHALTAVRRVNKTDVVNLGSNFGSLSRIMDASMEDLARCPGIGEKKVKRLYDTFHEPFR 840
            + H LT+VR VNKTDVV LG+ FGSLS IMDASMEDLARCPGIGE+KV+RLYDTFHEPF+
Sbjct: 247  LTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTFHEPFK 306

Query: 841  RTVITSQPGL--ASMEENTKTNLSKKEKQAAAK---VDKEQKKEEASISIKSALTAAFAK 1005
            R V+++ P +     + +TK   S +E+    K    D  Q K+E  +++KSAL+AAFAK
Sbjct: 307  R-VVSTHPAVPETPTQISTKPRSSNEEQDVDGKRIEEDGSQHKKEPKLNVKSALSAAFAK 365

Query: 1006 YADKIQKNKTASNKDEETHQEET 1074
            YADKI K+ +   + E+   E +
Sbjct: 366  YADKIAKSGSIPQEKEKGEPESS 388


>ref|XP_004167258.1| PREDICTED: DNA excision repair protein ERCC-1-like [Cucumis sativus]
          Length = 412

 Score =  348 bits (893), Expect = 2e-93
 Identities = 175/264 (66%), Positives = 206/264 (78%), Gaps = 5/264 (1%)
 Frame = +1

Query: 301  HIRNVKWVFADIVCDYLIGQNSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRXXXXXXX 480
            HIRN +W FAD+V DYL+GQ+SCALYLSLRYHLLHPDYLYYRIRELQKNFKLR       
Sbjct: 126  HIRNARWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVILCHVD 185

Query: 481  XXXXXKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLLQGQMDTDYLSR 660
                 KPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADL+QG MDTDYLSR
Sbjct: 186  VEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMDTDYLSR 245

Query: 661  MNHALTAVRRVNKTDVVNLGSNFGSLSRIMDASMEDLARCPGIGEKKVKRLYDTFHEPFR 840
            + H LT+VR VNKTDVV LG+ FGSLS IMDASMEDLARCPGIGE+KV+RLYDTFHEPF+
Sbjct: 246  LTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTFHEPFK 305

Query: 841  RTVITSQPGL--ASMEENTKTNLSKKEKQAAAK---VDKEQKKEEASISIKSALTAAFAK 1005
            R V+++ P +     + +TK   S +E+    K    D  Q K+E  +++KSAL+AAFAK
Sbjct: 306  R-VVSTHPAVPETPTQISTKPRSSNEEQDVDGKRIEEDGSQHKKEPKLNVKSALSAAFAK 364

Query: 1006 YADKIQKNKTASNKDEETHQEETT 1077
            YADKI K+ +   + ++ + +  T
Sbjct: 365  YADKIAKSGSIPQEKKKENLKVAT 388


>ref|XP_002281063.2| PREDICTED: DNA excision repair protein ERCC-1-like [Vitis vinifera]
            gi|296088298|emb|CBI36743.3| unnamed protein product
            [Vitis vinifera]
          Length = 398

 Score =  347 bits (890), Expect = 4e-93
 Identities = 179/265 (67%), Positives = 203/265 (76%), Gaps = 7/265 (2%)
 Frame = +1

Query: 301  HIRNVKWVFADIVCDYLIGQNSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRXXXXXXX 480
            HIRNV+W FADIVCDYL+GQNSCALYLSLRYHLLHPDYLYYRIRELQKNFKLR       
Sbjct: 122  HIRNVRWDFADIVCDYLLGQNSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHVD 181

Query: 481  XXXXXKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLLQGQMDTDYLSR 660
                 KPLLEVT+TALLHDCTLLCAWSLEECGRYLETIKVYENK AD++QGQ DTDYLSR
Sbjct: 182  VEDVIKPLLEVTRTALLHDCTLLCAWSLEECGRYLETIKVYENKSADIIQGQTDTDYLSR 241

Query: 661  MNHALTAVRRVNKTDVVNLGSNFGSLSRIMDASMEDLARCPGIGEKKVKRLYDTFHEPFR 840
            + HALT VR VNKTDVV LGS FGSLS IMDASMEDLARCPGIGE+KVKRLYDTFHEPF+
Sbjct: 242  LTHALTTVRHVNKTDVVTLGSTFGSLSHIMDASMEDLARCPGIGERKVKRLYDTFHEPFK 301

Query: 841  RTVITSQPGLASMEENTKTNLSKKEKQAAAKVDKE----QKKEEASISIKSALTAAFAKY 1008
            R V+ S P +     +     S   +    + D E    ++K+E  +++KSAL+AAFA+Y
Sbjct: 302  R-VVPSCPAVPENPVHNNAEPSSVNEVVEVENDVEDASKRRKKEPELTVKSALSAAFAQY 360

Query: 1009 ADKIQK--NKTASNKDEET-HQEET 1074
            ++KI K  N+    K EE  H  ET
Sbjct: 361  SEKIGKRNNRPQGKKHEEKGHAPET 385


>ref|XP_002512344.1| excision repair cross-complementing 1 ercc1, putative [Ricinus
            communis] gi|223548305|gb|EEF49796.1| excision repair
            cross-complementing 1 ercc1, putative [Ricinus communis]
          Length = 392

 Score =  345 bits (886), Expect = 1e-92
 Identities = 172/262 (65%), Positives = 202/262 (77%), Gaps = 3/262 (1%)
 Frame = +1

Query: 301  HIRNVKWVFADIVCDYLIGQNSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRXXXXXXX 480
            HIRNV+W FAD+VCDYL+GQN C+LYLSLRYHLLHPDYLYYRIRELQKN+KLR       
Sbjct: 117  HIRNVRWAFADVVCDYLLGQNCCSLYLSLRYHLLHPDYLYYRIRELQKNYKLRVVLCHVD 176

Query: 481  XXXXXKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLLQGQMDTDYLSR 660
                 KPLLEVTKTALLHDCTLLCAWSLEECGRYLETIK+YENKPADL+QGQMDTDYLSR
Sbjct: 177  VEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKMYENKPADLIQGQMDTDYLSR 236

Query: 661  MNHALTAVRRVNKTDVVNLGSNFGSLSRIMDASMEDLARCPGIGEKKVKRLYDTFHEPFR 840
            + HALT +R VNKTDVV LGS FGSLS IMDASMEDLARCPGIGE+KVKRLYDTFHEPF+
Sbjct: 237  LTHALTTIRHVNKTDVVTLGSTFGSLSNIMDASMEDLARCPGIGERKVKRLYDTFHEPFK 296

Query: 841  RTVITSQPGLASMEENTKTNLSKKEKQAAAKVDKEQ---KKEEASISIKSALTAAFAKYA 1011
            R V++S P +    +         E     K + ++   +K+E  +++KSAL+AAF+KYA
Sbjct: 297  R-VVSSHPAVPETSQKDSEPALVDEVTEVGKGEYDESKWRKKEPELTVKSALSAAFSKYA 355

Query: 1012 DKIQKNKTASNKDEETHQEETT 1077
            +   K    ++K E  +  ET+
Sbjct: 356  NTFVKR---TDKSEGENAGETS 374


>ref|XP_002328427.1| predicted protein [Populus trichocarpa] gi|222838142|gb|EEE76507.1|
            predicted protein [Populus trichocarpa]
          Length = 382

 Score =  345 bits (884), Expect = 2e-92
 Identities = 175/270 (64%), Positives = 207/270 (76%), Gaps = 15/270 (5%)
 Frame = +1

Query: 301  HIRNVKWVFADIVCDYLIGQNSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRXXXXXXX 480
            HIRNVKW FAD+VCDYL+GQ+SCALYLSLRYHLLHPDYLYYRIRELQKN KLR       
Sbjct: 111  HIRNVKWAFADVVCDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNCKLRVVLCHVD 170

Query: 481  XXXXXKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLLQGQMDTDYLSR 660
                 KPLLEVTKTALLHDCTLLCAWSLEECGRYLETIK+YENKPADL+QGQMDTDY SR
Sbjct: 171  VEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKMYENKPADLIQGQMDTDYSSR 230

Query: 661  MNHALTAVRRVNKTDVVNLGSNFGSLSRIMDASMEDLARCPGIGEKKVKRLYDTFHEPFR 840
            ++HALT VRRVNKTDVV LGS FGSLS IMDASMEDLARCPGIGE+KVKRLYDTFHEPF+
Sbjct: 231  LHHALTTVRRVNKTDVVTLGSTFGSLSNIMDASMEDLARCPGIGERKVKRLYDTFHEPFK 290

Query: 841  RTVITSQPGLASMEENTKTNLSKKEKQAAAKVDK----EQKKEEASISIKSALTAAFAKY 1008
            R V++S P +        T  S  ++ A  ++++    + +K+E  +++KSAL++AFAK 
Sbjct: 291  R-VVSSHPVVPQTPVQKDTEPSSVDEVAEMEMEEANANKHRKKEPELTVKSALSSAFAKC 349

Query: 1009 A-----------DKIQKNKTASNKDEETHQ 1065
            A           +K+ +  TA + + ET +
Sbjct: 350  ATNKLGNKKFQREKVGETSTAIDSEAETRK 379