BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00015753
         (857 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276015.1| PREDICTED: pentatricopeptide repeat-containi...   135   8e-31
ref|XP_002307076.1| predicted protein [Populus trichocarpa] gi|2...   130   1e-30
ref|XP_003617675.1| Pentatricopeptide repeat-containing protein ...   129   8e-28
ref|NP_680777.2| pentatricopeptide repeat-containing protein [Ar...   121   2e-25
ref|XP_002866898.1| pentatricopeptide repeat-containing protein ...   118   1e-24

>ref|XP_002276015.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  135 bits (340), Expect(2) = 8e-31
 Identities = 64/116 (55%), Positives = 82/116 (70%), Gaps = 3/116 (2%)
 Frame = -3

Query: 846 DACKVFDEMSVRDVVAWTVLIVGCVQNDENEMGLSYFCKMHKVG---EKSNCRTIEGGLQ 676
           +A  VFDE+  RDVVAWT L++GCVQN E++MGL   C+MH++G   E+ N RT+EGG Q
Sbjct: 187 EAYGVFDEILFRDVVAWTALVIGCVQNGESKMGLECLCEMHRIGGDGERPNFRTLEGGFQ 246

Query: 675 ACGNLGDVFNGKCLHACALKAGNGYSQFLQSSLLLMYSMCGSNEEAYLAFATYLKK 508
           ACGNLG +  G+CLH   +K G  YSQ +QS LL MYS CG+ EEA+ +F   L K
Sbjct: 247 ACGNLGALLEGRCLHGLVVKTGMDYSQVVQSLLLSMYSKCGNPEEAHRSFCEVLNK 302



 Score = 25.0 bits (53), Expect(2) = 8e-31
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -2

Query: 529 FCNLPEKDLISWTVVI 482
           FC +  KD+ISWT +I
Sbjct: 296 FCEVLNKDIISWTSMI 311


>ref|XP_002307076.1| predicted protein [Populus trichocarpa] gi|222856525|gb|EEE94072.1|
           predicted protein [Populus trichocarpa]
          Length = 733

 Score =  130 bits (327), Expect(2) = 1e-30
 Identities = 64/118 (54%), Positives = 83/118 (70%), Gaps = 3/118 (2%)
 Frame = -3

Query: 852 MGDACKVFDEMSVRDVVAWTVLIVGCVQNDENEMGLSYFCKMHKVG---EKSNCRTIEGG 682
           M DA  +FDE+ VRDVV+WT L++G V ND++E GL   C+M ++G   EK N RT+EGG
Sbjct: 182 MEDASLMFDEIVVRDVVSWTALVIGYVHNDDSEKGLECLCEMRRIGGDGEKVNSRTLEGG 241

Query: 681 LQACGNLGDVFNGKCLHACALKAGNGYSQFLQSSLLLMYSMCGSNEEAYLAFATYLKK 508
            QACGNLG +  G+CLH  A+K G G SQ +QSSLL MYS CG+ EEA+ +F   + K
Sbjct: 242 FQACGNLGAMIAGRCLHGLAVKTGLGCSQVVQSSLLSMYSKCGNVEEAHNSFCQVVDK 299



 Score = 29.3 bits (64), Expect(2) = 1e-30
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = -2

Query: 529 FCNLPEKDLISWTVVIGV 476
           FC + +KD+ SWT VIGV
Sbjct: 293 FCQVVDKDVFSWTSVIGV 310


>ref|XP_003617675.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355519010|gb|AET00634.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 758

 Score =  129 bits (324), Expect = 8e-28
 Identities = 64/119 (53%), Positives = 82/119 (68%), Gaps = 3/119 (2%)
 Frame = -3

Query: 855 EMGDACKVFDEMSVRDVVAWTVLIVGCVQNDENEMGLSYFCKMHKVGE---KSNCRTIEG 685
           EM DA KVFDE+ VRDVVAWT L++G VQN E+EMGL    +M++VG+   K N RT+EG
Sbjct: 160 EMNDAVKVFDEIPVRDVVAWTALVIGYVQNGESEMGLECISEMYRVGDDSQKPNARTLEG 219

Query: 684 GLQACGNLGDVFNGKCLHACALKAGNGYSQFLQSSLLLMYSMCGSNEEAYLAFATYLKK 508
           G  ACGNLGD+ +G+CLH   +K G G    +QSS+L MY  CG   EAY +F+  + K
Sbjct: 220 GFLACGNLGDLVSGRCLHGLVVKNGIGCLLDIQSSVLSMYCKCGVPREAYQSFSEVINK 278


>ref|NP_680777.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|223635624|sp|Q3E9N1.2|PP359_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g39952, mitochondrial; Flags: Precursor
           gi|332661744|gb|AEE87144.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 775

 Score =  121 bits (304), Expect = 2e-25
 Identities = 62/110 (56%), Positives = 74/110 (67%), Gaps = 3/110 (2%)
 Frame = -3

Query: 846 DACKVFDEMSVRDVVAWTVLIVGCVQNDENEMGLSYFCKMHKVG---EKSNCRTIEGGLQ 676
           DAC VFDEM  RDVVAWT +I G VQN E+E GL Y CKMH  G   +K N RT+E G Q
Sbjct: 179 DACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQ 238

Query: 675 ACGNLGDVFNGKCLHACALKAGNGYSQFLQSSLLLMYSMCGSNEEAYLAF 526
           AC NLG +  G+CLH  A+K G   S+F+QSS+   YS  G+  EAYL+F
Sbjct: 239 ACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSF 288


>ref|XP_002866898.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297312734|gb|EFH43157.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 742

 Score =  118 bits (296), Expect = 1e-24
 Identities = 61/110 (55%), Positives = 73/110 (66%), Gaps = 3/110 (2%)
 Frame = -3

Query: 846 DACKVFDEMSVRDVVAWTVLIVGCVQNDENEMGLSYFCKMHKVG---EKSNCRTIEGGLQ 676
           DAC VFDEM  RDVVAWT +I G VQN E+E  L Y CKMH VG   +K N RT+E G Q
Sbjct: 184 DACLVFDEMPERDVVAWTAIISGHVQNRESERALGYLCKMHTVGSDVDKPNPRTLECGFQ 243

Query: 675 ACGNLGDVFNGKCLHACALKAGNGYSQFLQSSLLLMYSMCGSNEEAYLAF 526
           AC NLG +  G+CLH  A+K G   S  +QSS+  +YS  G+  EAYL+F
Sbjct: 244 ACSNLGALKEGRCLHGFAVKNGLASSNVVQSSIFSLYSKSGNPAEAYLSF 293