BLASTX nr result

ID: Aconitum21_contig00015712 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00015712
         (512 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524761.1| Protein AFR, putative [Ricinus communis] gi|...    90   2e-30
ref|XP_002307595.1| f-box family protein [Populus trichocarpa] g...    81   5e-28
ref|XP_003632309.1| PREDICTED: F-box/kelch-repeat protein SKIP30...    82   2e-27
ref|XP_003521251.1| PREDICTED: F-box/kelch-repeat protein SKIP30...    82   3e-27
gb|ACU17996.1| unknown [Glycine max]                                   82   3e-27

>ref|XP_002524761.1| Protein AFR, putative [Ricinus communis]
           gi|223535945|gb|EEF37604.1| Protein AFR, putative
           [Ricinus communis]
          Length = 345

 Score = 89.7 bits (221), Expect(2) = 2e-30
 Identities = 40/74 (54%), Positives = 46/74 (62%)
 Frame = +1

Query: 205 RCFARVPFYAHPNLQHVCHSWRDAFRSPELFRTRRXXXXXXXXXXXXTFEPENSWQLYNP 384
           RC ARVPFY HP L+ V HSWR A RSPELF+ R+             FEPEN WQLY+P
Sbjct: 15  RCIARVPFYLHPKLELVSHSWRSAIRSPELFKARQEVGSAEDLLCVCAFEPENLWQLYDP 74

Query: 385 VKDLWIPFLFCPRK 426
           ++DLWI     P K
Sbjct: 75  LRDLWITLPVLPSK 88



 Score = 67.8 bits (164), Expect(2) = 2e-30
 Identities = 31/37 (83%), Positives = 35/37 (94%)
 Frame = +3

Query: 402 TLPILPSQIRRLSHFGVVSVAGKLFVLGGGSDAVDPL 512
           TLP+LPS+IR L+HFGVVS AGKL+VLGGGSDAVDPL
Sbjct: 81  TLPVLPSKIRHLAHFGVVSTAGKLYVLGGGSDAVDPL 117


>ref|XP_002307595.1| f-box family protein [Populus trichocarpa]
           gi|118482816|gb|ABK93324.1| unknown [Populus
           trichocarpa] gi|222857044|gb|EEE94591.1| f-box family
           protein [Populus trichocarpa]
          Length = 345

 Score = 81.3 bits (199), Expect(2) = 5e-28
 Identities = 37/74 (50%), Positives = 43/74 (58%)
 Frame = +1

Query: 205 RCFARVPFYAHPNLQHVCHSWRDAFRSPELFRTRRXXXXXXXXXXXXTFEPENSWQLYNP 384
           RC ARVPFY HP L+ V  SWR   RSPELF+ R+             F+PEN WQLY+P
Sbjct: 15  RCIARVPFYLHPKLELVSRSWRAVVRSPELFKARQEVGSAEDLLCVCAFDPENLWQLYDP 74

Query: 385 VKDLWIPFLFCPRK 426
            +DLWI     P K
Sbjct: 75  HRDLWITLPVLPSK 88



 Score = 68.2 bits (165), Expect(2) = 5e-28
 Identities = 32/37 (86%), Positives = 35/37 (94%)
 Frame = +3

Query: 402 TLPILPSQIRRLSHFGVVSVAGKLFVLGGGSDAVDPL 512
           TLP+LPS+IR L+HFGVVS AGKLFVLGGGSDAVDPL
Sbjct: 81  TLPVLPSKIRHLAHFGVVSSAGKLFVLGGGSDAVDPL 117


>ref|XP_003632309.1| PREDICTED: F-box/kelch-repeat protein SKIP30-like isoform 1 [Vitis
           vinifera] gi|359479635|ref|XP_003632310.1| PREDICTED:
           F-box/kelch-repeat protein SKIP30-like isoform 2 [Vitis
           vinifera] gi|359479637|ref|XP_003632311.1| PREDICTED:
           F-box/kelch-repeat protein SKIP30-like isoform 3 [Vitis
           vinifera]
          Length = 345

 Score = 81.6 bits (200), Expect(2) = 2e-27
 Identities = 37/74 (50%), Positives = 43/74 (58%)
 Frame = +1

Query: 205 RCFARVPFYAHPNLQHVCHSWRDAFRSPELFRTRRXXXXXXXXXXXXTFEPENSWQLYNP 384
           RC A VPFY HP L+ V  SWRDA R PELF+ R+             F+PEN WQLY+P
Sbjct: 15  RCLAWVPFYLHPRLELVSRSWRDAIRGPELFKARQEVGSSEDLLCVCAFDPENLWQLYDP 74

Query: 385 VKDLWIPFLFCPRK 426
            KDLWI     P +
Sbjct: 75  RKDLWISLPVLPSR 88



 Score = 65.9 bits (159), Expect(2) = 2e-27
 Identities = 30/37 (81%), Positives = 34/37 (91%)
 Frame = +3

Query: 402 TLPILPSQIRRLSHFGVVSVAGKLFVLGGGSDAVDPL 512
           +LP+LPS+IR L+HFG VS AGKLFVLGGGSDAVDPL
Sbjct: 81  SLPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDAVDPL 117


>ref|XP_003521251.1| PREDICTED: F-box/kelch-repeat protein SKIP30-like [Glycine max]
          Length = 345

 Score = 81.6 bits (200), Expect(2) = 3e-27
 Identities = 37/74 (50%), Positives = 45/74 (60%)
 Frame = +1

Query: 205 RCFARVPFYAHPNLQHVCHSWRDAFRSPELFRTRRXXXXXXXXXXXXTFEPENSWQLYNP 384
           RC ARVPFY HP L+ V  SW+ A RSPELF+ R+             F+PEN WQLY+P
Sbjct: 15  RCLARVPFYFHPVLELVSRSWQAAIRSPELFKARQEVGSTEDLLCVCAFDPENLWQLYDP 74

Query: 385 VKDLWIPFLFCPRK 426
           ++DLWI     P K
Sbjct: 75  MRDLWITLPVLPSK 88



 Score = 65.1 bits (157), Expect(2) = 3e-27
 Identities = 30/37 (81%), Positives = 34/37 (91%)
 Frame = +3

Query: 402 TLPILPSQIRRLSHFGVVSVAGKLFVLGGGSDAVDPL 512
           TLP+LPS+IR LS+FG VS AGKLFV+GGGSDAVDPL
Sbjct: 81  TLPVLPSKIRHLSNFGAVSTAGKLFVIGGGSDAVDPL 117


>gb|ACU17996.1| unknown [Glycine max]
          Length = 345

 Score = 81.6 bits (200), Expect(2) = 3e-27
 Identities = 37/74 (50%), Positives = 45/74 (60%)
 Frame = +1

Query: 205 RCFARVPFYAHPNLQHVCHSWRDAFRSPELFRTRRXXXXXXXXXXXXTFEPENSWQLYNP 384
           RC ARVPFY HP L+ V  SW+ A RSPELF+ R+             F+PEN WQLY+P
Sbjct: 15  RCLARVPFYFHPVLELVSRSWQAAIRSPELFKARQEVGSTEDLLCVCAFDPENLWQLYDP 74

Query: 385 VKDLWIPFLFCPRK 426
           ++DLWI     P K
Sbjct: 75  MRDLWITLPVLPSK 88



 Score = 65.1 bits (157), Expect(2) = 3e-27
 Identities = 30/37 (81%), Positives = 34/37 (91%)
 Frame = +3

Query: 402 TLPILPSQIRRLSHFGVVSVAGKLFVLGGGSDAVDPL 512
           TLP+LPS+IR LS+FG VS AGKLFV+GGGSDAVDPL
Sbjct: 81  TLPVLPSKIRHLSNFGAVSTAGKLFVIGGGSDAVDPL 117


Top