BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00015674
         (3619 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub...  1249   0.0  
emb|CBI29879.3| unnamed protein product [Vitis vinifera]             1242   0.0  
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni...  1194   0.0  
ref|XP_002308049.1| predicted protein [Populus trichocarpa] gi|2...  1148   0.0  
ref|XP_003537204.1| PREDICTED: DNA-directed RNA polymerase I sub...  1147   0.0  

>ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis
            vinifera]
          Length = 1740

 Score = 1249 bits (3232), Expect = 0.0
 Identities = 659/1138 (57%), Positives = 812/1138 (71%), Gaps = 27/1138 (2%)
 Frame = +1

Query: 82   TDSVDSVKFSFLTTEEVRKYSFKKITQVQLFDNLDSPVPGGLYDPALGPLRDKANCRSCG 261
            T+ V++VKFSF T EEVRKYSFKKIT   + D++  PVPGGLYDPALG + +   C+SCG
Sbjct: 58   TEFVEAVKFSFFTDEEVRKYSFKKITSPLMLDSVQRPVPGGLYDPALGSIDENTPCQSCG 117

Query: 262  QRALDCPGHCGHIELVSLVYNPLLFTILQNLLKKTCFSCHHFTDKREEVEKCVSKLQLIM 441
            QR+  CPGHCGHI+LVS VYNPLLF +L NLL+KTCF CHHF      V+K VS+L+LI 
Sbjct: 118  QRSFYCPGHCGHIDLVSSVYNPLLFNLLHNLLQKTCFFCHHFKTSSSLVQKYVSQLELIS 177

Query: 442  KGDIVGANSI-GVSKGDLDSSDENAAGHVKDATDRSRASSDN-SKHLNEQNWTSLQYGHA 615
            KGD+VGA ++  +S  +    +++   HV  ++  + ++ DN S HL +Q WTSLQ   A
Sbjct: 178  KGDVVGAKNLDSISPSESSYPEDSDGSHVSCSSTVNSSARDNCSVHLKQQEWTSLQCIEA 237

Query: 616  VSFLEEFMKKRSKKCTGCGVRCPTITNPTFGWMYM-NASSTTIRSNIIGRAVLDKPIIAE 792
            +S ++ F+K + + C  C  + P +T PTFGW +M   S    R+N+I  + L++P+   
Sbjct: 238  MSVMDNFLKLKHRDCKNCKAKSPQVTKPTFGWFHMAGLSDAQTRANVIRGSKLERPLSRV 297

Query: 793  AEQEVITSGVRTFDGVSARGTEVDSGDTQSAGAVYDSPPVSSAKAKKDKVGNASSEFSKQ 972
            AE++  +S V   + +   G  VD+ +T S+ A  D    +  K  + K   A  EF KQ
Sbjct: 298  AEEKS-SSEVENVNDMFPWGDGVDTDETHSSIAPTDGIQDTVTKRLERKGAQAPIEFIKQ 356

Query: 973  MKSFSGPLLPSEAEQHIKLLWDNETQLCSLISDIHQEILSISEKKRSYSMFFIEALLVPP 1152
               FSGPLLPSE    ++ LW+NE +LCS ISDI QE L  S  K  YSMFF+E +LVPP
Sbjct: 357  KSFFSGPLLPSEVRDIMERLWENEAELCSFISDILQERLGASGNKAGYSMFFLETILVPP 416

Query: 1153 IKFRPITMGGDSVTNHPQTVLLSKILQSSIDLGNAHMY--DRSKVVTRWLDLQQSVNFLF 1326
            IKFRP + G  SV  HPQTVLL K+LQ++I LGNAH    +RSK+++RW+DLQQS+N LF
Sbjct: 417  IKFRPPSKGQISVMEHPQTVLLGKVLQANIALGNAHANNSERSKIISRWMDLQQSINVLF 476

Query: 1327 GNKKSIGQ-KDNTGIGICQVLEKKEGIFRQKMMGKRVNYSCRSVISPDPYLAVNEIGIPP 1503
              K + GQ + +TG GICQ+LEKKEG+FRQKMMGKRVN++CRSVISPDPYLAVNEIGIPP
Sbjct: 477  DGKTAAGQGQRDTGSGICQLLEKKEGVFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPP 536

Query: 1504 CFALKLTYPERVTPWNVDKLRSAIRNGPDIHPGATHYFDQTLSI-LPPSKKMRTSISRKL 1680
             FAL+LTYPE+VTPWNV KLR AI NGP+IHPGATHY D+  ++ L  +KKMR SISRKL
Sbjct: 537  YFALRLTYPEKVTPWNVVKLRDAIINGPEIHPGATHYVDKLSTVKLAVNKKMRISISRKL 596

Query: 1681 PSSKGVVAQLGKSVKHEHEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLPGEKTL 1860
            PSS+GVVAQ G+S  +E EGK+VYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVL GEKTL
Sbjct: 597  PSSRGVVAQPGRSSDNEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTL 656

Query: 1861 RMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYQIVNANNQYIIPTSGDTKRGLIQDHI 2040
            RMHYANCSTYNADFDGDEMNVHFPQDEISRAEAY IVNANNQYI+P+ GD  RGLIQDHI
Sbjct: 657  RMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYIVPSRGDPIRGLIQDHI 716

Query: 2041 VSAVLLTKKDTFLTREEYTYLLYSSGVSAAPRSSFVGKSGRKVSMLCSEDEMELVVPAIL 2220
            VSAVLLTKKDTFLTRE+Y  LLYSSG+S+    SF+GK G+KVS+L SEDEM+ ++PAI 
Sbjct: 717  VSAVLLTKKDTFLTREQYNQLLYSSGLSSG-SGSFIGKPGKKVSVLDSEDEMQPLLPAIW 775

Query: 2221 KPEPLWTGKQVITSLLNHMTKKKGLSPFTFEAKCTIDKDFLTS---QSGSGKVNDP---- 2379
            KPEPLW+GKQVIT++LNH+T  +G  PFT E    I +++  S   +  SGK  DP    
Sbjct: 776  KPEPLWSGKQVITAVLNHIT--RGRKPFTTEKDGKIPREYFGSEIDEKKSGKGKDPGSDR 833

Query: 2380 -------------PFQIHENDFLNGVIDKAQFGKYGLIHTVQELYGPDTAGSLLSGLSRL 2520
                            IH+N+ + GVIDKAQF KYGL+H VQELYG +TAG LLS LSRL
Sbjct: 834  RKEKRIEKKHGEYKLLIHKNELVRGVIDKAQFDKYGLVHMVQELYGSNTAGILLSVLSRL 893

Query: 2521 FTLFLQLHGFTCGIDDLLLKRNIDIMRRRKLQDAKLVDKEAYLKFTNTKDESTNNFGENV 2700
            FT+FLQ+HGFTCG+DDLL+  N DI R+ +L  ++ + +  + KF        +N G+  
Sbjct: 894  FTVFLQMHGFTCGVDDLLISPNYDIARKIELDKSENIGELVHCKFIG------SNHGK-- 945

Query: 2701 NADSILLDAGERRKLQDGIEKAVRVHGESAIKLLDKYMTNAAHTLLNEVNSIVFSNKSKD 2880
              D +        KLQ  +EK +  +GE+AI  LD+ M N  + L ++VN  +       
Sbjct: 946  -IDPV--------KLQVEVEKIILSNGEAAITRLDRMMKNELNELTSKVNKDLLLK---- 992

Query: 2881 QSANKLKDKSEELGLSKAFPRNCFFLMTVSGAKGSQVNFXXXXXXXXXXXXEGKRVPLMI 3060
                         GL K FP+NC  LMT +GAKGS VNF            EGKRVP M+
Sbjct: 993  -------------GLVKPFPKNCLSLMTTTGAKGSTVNFSQISSFLGQQDLEGKRVPRMV 1039

Query: 3061 SGKTLPCFPPWDPALRAGGFITDCFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQR 3240
            SGKTLPCFPPWD A RAGGFI+D FLTGL PQEYYFHCMAGREGLVDTAVKTSRSGYLQR
Sbjct: 1040 SGKTLPCFPPWDCAARAGGFISDRFLTGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQR 1099

Query: 3241 CLVKSLECLKVNYDHTVRDADGSVVQFCYGEDGVDVHKTSFISKFDTIASNPRVFRER 3414
            CL+K+LECLKV YD+TVRD+DGS+VQF YG+DGVDVH+TSFI++F+ +A N  V  E+
Sbjct: 1100 CLIKNLECLKVCYDYTVRDSDGSIVQFNYGDDGVDVHQTSFITEFEALAVNEEVVCEK 1157


>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
          Length = 1669

 Score = 1242 bits (3213), Expect = 0.0
 Identities = 658/1146 (57%), Positives = 806/1146 (70%), Gaps = 27/1146 (2%)
 Frame = +1

Query: 58   MAHRAELATDSVDSVKFSFLTTEEVRKYSFKKITQVQLFDNLDSPVPGGLYDPALGPLRD 237
            MAH  E  T+ V++VKFSF T EEVRKYSFKKIT   + D++  PVPGGLYDPALG + +
Sbjct: 1    MAHVIEGTTEFVEAVKFSFFTDEEVRKYSFKKITSPLMLDSVQRPVPGGLYDPALGSIDE 60

Query: 238  KANCRSCGQRALDCPGHCGHIELVSLVYNPLLFTILQNLLKKTCFSCHHFTDKREEVEKC 417
               C+SCGQR+  CPGHCGHI+LVS VYNPLLF +L NLL+KTCF CHHF      V+K 
Sbjct: 61   NTPCQSCGQRSFYCPGHCGHIDLVSSVYNPLLFNLLHNLLQKTCFFCHHFKTSSSLVQKY 120

Query: 418  VSKLQLIMKGDIVGANSI-GVSKGDLDSSDENAAGHVKDATDRSRASSDN-SKHLNEQNW 591
            VS+L+LI KGD+VGA ++  +S  +    +++   HV  ++  + ++ DN S HL +Q W
Sbjct: 121  VSQLELISKGDVVGAKNLDSISPSESSYPEDSDGSHVSCSSTVNSSARDNCSVHLKQQEW 180

Query: 592  TSLQYGHAVSFLEEFMKKRSKKCTGCGVRCPTITNPTFGWMYM-NASSTTIRSNIIGRAV 768
            TSLQ   A+S ++ F+K + + C  C  + P +T PTFGW +M   S    R+N+I  + 
Sbjct: 181  TSLQCIEAMSVMDNFLKLKHRDCKNCKAKSPQVTKPTFGWFHMAGLSDAQTRANVIRGSK 240

Query: 769  LDKPIIAEAEQEVITSGVRTFDGVSARGTEVDSGDTQSAGAVYDSPPVSSAKAKKDKVGN 948
            L++P+                         VD+ +T S+ A  D    +  K  + K   
Sbjct: 241  LERPL-----------------------NGVDTDETHSSIAPTDGIQDTVTKRLERKGAQ 277

Query: 949  ASSEFSKQMKSFSGPLLPSEAEQHIKLLWDNETQLCSLISDIHQEILSISEKKRSYSMFF 1128
            A  EF KQ   FSGPLLPSE    ++ LW+NE +LCS ISDI QE L  S  K  YSMFF
Sbjct: 278  APIEFIKQKSFFSGPLLPSEVRDIMERLWENEAELCSFISDILQERLGASGNKAGYSMFF 337

Query: 1129 IEALLVPPIKFRPITMGGDSVTNHPQTVLLSKILQSSIDLGNAHMY--DRSKVVTRWLDL 1302
            +E +LVPPIKFRP + G  SV  HPQTVLL K+LQ++I LGNAH    +RSK+++RW+DL
Sbjct: 338  LETILVPPIKFRPPSKGQISVMEHPQTVLLGKVLQANIALGNAHANNSERSKIISRWMDL 397

Query: 1303 QQSVNFLFGNKKSIGQ-KDNTGIGICQVLEKKEGIFRQKMMGKRVNYSCRSVISPDPYLA 1479
            QQS+N LF  K + GQ + +TG GICQ+LEKKEG+FRQKMMGKRVN++CRSVISPDPYLA
Sbjct: 398  QQSINVLFDGKTAAGQGQRDTGSGICQLLEKKEGVFRQKMMGKRVNFACRSVISPDPYLA 457

Query: 1480 VNEIGIPPCFALKLTYPERVTPWNVDKLRSAIRNGPDIHPGATHYFDQTLSI-LPPSKKM 1656
            VNEIGIPP FAL+LTYPE+VTPWNV KLR AI NGP+IHPGATHY D+  ++ L  +KKM
Sbjct: 458  VNEIGIPPYFALRLTYPEKVTPWNVVKLRDAIINGPEIHPGATHYVDKLSTVKLAVNKKM 517

Query: 1657 RTSISRKLPSSKGVVAQLGKSVKHEHEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVR 1836
            R SISRKLPSS+GVVAQ G+S  +E EGK+VYRHLQDGDIVLVNRQPTLHKPSIMAHVVR
Sbjct: 518  RISISRKLPSSRGVVAQPGRSSDNEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHVVR 577

Query: 1837 VLPGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYQIVNANNQYIIPTSGDTK 2016
            VL GEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAY IVNANNQYI+P+ GD  
Sbjct: 578  VLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYIVPSRGDPI 637

Query: 2017 RGLIQDHIVSAVLLTKKDTFLTREEYTYLLYSSGVSAAPRSSFVGKSGRKVSMLCSEDEM 2196
            RGLIQDHIVSAVLLTKKDTFLTRE+Y  LLYSSG+S+    SF+GK G+KVS+L SEDEM
Sbjct: 638  RGLIQDHIVSAVLLTKKDTFLTREQYNQLLYSSGLSSG-SGSFIGKPGKKVSVLDSEDEM 696

Query: 2197 ELVVPAILKPEPLWTGKQVITSLLNHMTKKKGLSPFTFEAKCTIDKDFLTS---QSGSGK 2367
            + ++PAI KPEPLW+GKQVIT++LNH+T  +G  PFT E    I +++  S   +  SGK
Sbjct: 697  QPLLPAIWKPEPLWSGKQVITAVLNHIT--RGRKPFTTEKDGKIPREYFGSEIDEKKSGK 754

Query: 2368 VNDP-----------------PFQIHENDFLNGVIDKAQFGKYGLIHTVQELYGPDTAGS 2496
              DP                    IH+N+ + GVIDKAQF KYGL+H VQELYG +TAG 
Sbjct: 755  GKDPGSDRRKEKRIEKKHGEYKLLIHKNELVRGVIDKAQFDKYGLVHMVQELYGSNTAGI 814

Query: 2497 LLSGLSRLFTLFLQLHGFTCGIDDLLLKRNIDIMRRRKLQDAKLVDKEAYLKFTNTKDES 2676
            LLS LSRLFT+FLQ+HGFTCG+DDLL+  N DI R+ +L  ++ + +  + KF       
Sbjct: 815  LLSVLSRLFTVFLQMHGFTCGVDDLLISPNYDIARKIELDKSENIGELVHCKFIG----- 869

Query: 2677 TNNFGENVNADSILLDAGERRKLQDGIEKAVRVHGESAIKLLDKYMTNAAHTLLNEVNSI 2856
             +N G+    D +        KLQ  +EK +  +GE+AI  LD+ M N  + L ++VN  
Sbjct: 870  -SNHGK---IDPV--------KLQVEVEKIILSNGEAAITRLDRMMKNELNELTSKVNKD 917

Query: 2857 VFSNKSKDQSANKLKDKSEELGLSKAFPRNCFFLMTVSGAKGSQVNFXXXXXXXXXXXXE 3036
            +                    GL K FP+NC  LMT +GAKGS VNF            E
Sbjct: 918  LLLK-----------------GLVKPFPKNCLSLMTTTGAKGSTVNFSQISSFLGQQDLE 960

Query: 3037 GKRVPLMISGKTLPCFPPWDPALRAGGFITDCFLTGLRPQEYYFHCMAGREGLVDTAVKT 3216
            GKRVP M+SGKTLPCFPPWD A RAGGFI+D FLTGL PQEYYFHCMAGREGLVDTAVKT
Sbjct: 961  GKRVPRMVSGKTLPCFPPWDCAARAGGFISDRFLTGLHPQEYYFHCMAGREGLVDTAVKT 1020

Query: 3217 SRSGYLQRCLVKSLECLKVNYDHTVRDADGSVVQFCYGEDGVDVHKTSFISKFDTIASNP 3396
            SRSGYLQRCL+K+LECLKV YD+TVRD+DGS+VQF YG+DGVDVH+TSFI++F+ +A N 
Sbjct: 1021 SRSGYLQRCLIKNLECLKVCYDYTVRDSDGSIVQFNYGDDGVDVHQTSFITEFEALAVNE 1080

Query: 3397 RVFRER 3414
             V  E+
Sbjct: 1081 EVVCEK 1086


>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
            communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
            polymerase I largest subunit, putative [Ricinus communis]
          Length = 1686

 Score = 1194 bits (3088), Expect = 0.0
 Identities = 631/1143 (55%), Positives = 787/1143 (68%), Gaps = 22/1143 (1%)
 Frame = +1

Query: 52   LAMAHRAELATDSVDSVKFSFLTTEEVRKYSFKKITQVQLFDNLDSPVPGGLYDPALGPL 231
            +A++  ++ AT+S+DS+ FSFLT EEVRK+SF KIT  +L D ++ PVPGGLYDPALGPL
Sbjct: 2    VAISSVSKGATESIDSISFSFLTDEEVRKHSFVKITNPRLLDLVERPVPGGLYDPALGPL 61

Query: 232  RDKANCRSCGQRALDCPGHCGHIELVSLVYNPLLFTILQNLLKKTCFSCHHFTDKREEVE 411
             ++  C++CGQR+ +CPGHCGHI+LVS VYNPLLF  L  LL++TCF C HF  +R +VE
Sbjct: 62   SERTICKTCGQRSTNCPGHCGHIDLVSPVYNPLLFNFLHKLLQRTCFLCFHFRMQRGQVE 121

Query: 412  KCVSKLQLIMKGDIVGANSI-GVSKGDLDSSDENAAGHVKDATDRSRASSDNSKHLNEQN 588
            KC+ +L+LI+KGDIVGA  +  VS  +    +E+   H    T  S    ++ +H  +Q 
Sbjct: 122  KCIKQLELIVKGDIVGAKRLESVSPSEALYPEESDLSHESCPTIHSGVQCNDGEHTRQQG 181

Query: 589  WTSLQYGHAVSFLEEFMKKRSKKCTGCGVRCPTITNPTFGWMYMNA-SSTTIRSNIIGRA 765
            WTSLQ+  A+S L  F+K + KKC  C    P IT PTFGW + +  S  +IR+N+I   
Sbjct: 182  WTSLQFTEAMSVLNNFLKPKFKKCKNCESSNPNITKPTFGWFHTSGMSDASIRANVITGH 241

Query: 766  VLDKPIIAEAEQEVITSGVRTFDGVSARGTEVDSGDTQSAGAVYDSPPVSSAKAKKDKVG 945
             L   + +E E                       G T    A       S  K  K K  
Sbjct: 242  QLGGLLGSEIE-----------------------GTTDVEDAAEPGDQHSGTKKHKKKER 278

Query: 946  NASSEFSKQMKSFSGPLLPSEAEQHIKLLWDNETQLCSLISDIHQEILSISEKKRSYSMF 1125
                EF++Q  +FS  LLPSE ++ ++LLW NE ++CS ISD+ Q+     ++K   +MF
Sbjct: 279  KEVLEFTRQKSTFSKQLLPSEVKEKLELLWKNEARICSFISDLQQQ--EFGKRKAGPAMF 336

Query: 1126 FIEALLVPPIKFRPITMGGDSVTNHPQTVLLSKILQSSIDLGNAHMY-DRSKVVTRWLDL 1302
            F+E +LVPPIKFRP T GGDSV  HPQTVLLSK+LQS+I LG+AH+  + SK+V RWLDL
Sbjct: 337  FLETILVPPIKFRPPTKGGDSVMEHPQTVLLSKVLQSNISLGDAHINKEHSKIVRRWLDL 396

Query: 1303 QQSVNFLFGNKKSIGQKDNTGI-GICQVLEKKEGIFRQKMMGKRVNYSCRSVISPDPYLA 1479
            QQS+N LF +K + G     G  GICQ+LEKKEG+FRQKMMGKRVNY+CRSVISPDPY+ 
Sbjct: 397  QQSINTLFDSKTAKGPGQREGAPGICQLLEKKEGLFRQKMMGKRVNYACRSVISPDPYIG 456

Query: 1480 VNEIGIPPCFALKLTYPERVTPWNVDKLRSAIRNGPDIHPGATHYFDQ-TLSILPPSKKM 1656
            VNEIGIPPCFA+KLTYPERVTPWN+ KLR+A+ NG + HPGATHY D+ +++ LPP++K 
Sbjct: 457  VNEIGIPPCFAVKLTYPERVTPWNIAKLRNAVINGSECHPGATHYVDKLSINKLPPARKA 516

Query: 1657 RTSISRKLPSSKGVVAQLGKSVKHEHEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVR 1836
            R SISRKLPSS+G V Q GK  + E EGK+VYRHLQDGD+VLVNRQPTLHKPSIMAHVVR
Sbjct: 517  RISISRKLPSSRGAVTQAGKGSECEFEGKIVYRHLQDGDVVLVNRQPTLHKPSIMAHVVR 576

Query: 1837 VLPGEKTLRMHYANCS-TYNADFDGDEMNVHFPQDEISRAEAYQIVNANNQYIIPTSGDT 2013
            VL GEKTLRMHYANCS TYNADFDGDEMNVHFPQDE+SRAEAY IVNANNQ++ P++G+ 
Sbjct: 577  VLKGEKTLRMHYANCSITYNADFDGDEMNVHFPQDEVSRAEAYNIVNANNQFVRPSNGEP 636

Query: 2014 KRGLIQDHIVSAVLLTKKDTFLTREEYTYLLYSSGVSAAPRSSFVGKSGRKVSMLCSEDE 2193
             RGLIQDHIVSAVLLTKKDTFL+++E+  LLYSSGVS    +SF G+ G+KV    SEDE
Sbjct: 637  LRGLIQDHIVSAVLLTKKDTFLSQDEFNQLLYSSGVSTVGPNSFHGRPGQKVLWSRSEDE 696

Query: 2194 MELVVPAILKPEPLWTGKQVITSLLNHMTKKKGLSPFTFEAKCTIDKDFLTSQSGSGKV- 2370
            ++ + PAI KP+PLWTGKQVIT++LNH+T      PFT E    I  +F  S++   K  
Sbjct: 697  IQTLPPAIWKPKPLWTGKQVITAILNHITSDH--PPFTVEKDAKIPSNFFKSRANEDKPC 754

Query: 2371 ------NDPPFQ---------IHENDFLNGVIDKAQFGKYGLIHTVQELYGPDTAGSLLS 2505
                   D P +         +++N+ + GVIDK QFG+YGL+HTV EL G  TAG LLS
Sbjct: 755  QEEKSDKDAPAEKEPDEEKMLVYKNELVRGVIDKGQFGEYGLVHTVHELLGSHTAGILLS 814

Query: 2506 GLSRLFTLFLQLHGFTCGIDDLLLKRNIDIMRRRKLQDAKLVDKEAYLKFTNTKDESTNN 2685
             LSRLFT +LQ+HGFTCG+DDLL+  N D  R+++L+  +   +  +  F   KDE    
Sbjct: 815  VLSRLFTAYLQMHGFTCGVDDLLILTNKDEERKKQLEWCEKSGEAVHRNFIGIKDEK--- 871

Query: 2686 FGENVNADSILLDAGERRKLQDGIEKAVRVHGESAIKLLDKYMTNAAHTLLNEVNSIVFS 2865
                +  D + +        Q  IEK +R  G+SA+  LD+ M+N  +T   + +S V S
Sbjct: 872  ----IKIDPVAM--------QLNIEKTIRSDGDSALAYLDRQMSNELNT---KTSSGVIS 916

Query: 2866 NKSKDQSANKLKDKSEELGLSKAFPRNCFFLMTVSGAKGSQVNFXXXXXXXXXXXXEGKR 3045
            N   D             GL K   +NC  LMT SGAKGS+VNF            EGKR
Sbjct: 917  NLLSD-------------GLLKPSGKNCISLMTTSGAKGSKVNFQQISSFLGQQELEGKR 963

Query: 3046 VPLMISGKTLPCFPPWDPALRAGGFITDCFLTGLRPQEYYFHCMAGREGLVDTAVKTSRS 3225
            VP M+SGKTLPCF PWD A R+GG+ITD FLTGLRPQEYYFHCMAGREGLVDTAVKTSRS
Sbjct: 964  VPRMVSGKTLPCFHPWDWAARSGGYITDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRS 1023

Query: 3226 GYLQRCLVKSLECLKVNYDHTVRDADGSVVQFCYGEDGVDVHKTSFISKFDTIASNPRVF 3405
            GYLQRCL+K+LECLK+ YDHTVRDADGSVVQF YGEDGVDVH+TSFI+KF  +A N  + 
Sbjct: 1024 GYLQRCLIKNLECLKIGYDHTVRDADGSVVQFYYGEDGVDVHQTSFIAKFKELALNQDMI 1083

Query: 3406 RER 3414
             +R
Sbjct: 1084 YKR 1086


>ref|XP_002308049.1| predicted protein [Populus trichocarpa] gi|222854025|gb|EEE91572.1|
            predicted protein [Populus trichocarpa]
          Length = 1168

 Score = 1148 bits (2970), Expect = 0.0
 Identities = 625/1145 (54%), Positives = 769/1145 (67%), Gaps = 31/1145 (2%)
 Frame = +1

Query: 73   ELATDSVDSVKFSFLTTEEVRKYSFKKITQVQLFDNLDSPVPGGLYDPALGPLRDKANCR 252
            E AT SVDSV FSFLT EEV K+SF KIT  +L D LD PVPGGLYDPA+GPL D+  C+
Sbjct: 5    EGATVSVDSVAFSFLTDEEVHKHSFVKITSARLLDTLDKPVPGGLYDPAMGPLGDEP-CK 63

Query: 253  SCGQRALDCPGHCGHIELVSLVYNPLLFTILQNLLKKTCFSCHHFTDKREEVEKCVSKLQ 432
            +CGQR+ +C GHCGHI+L+S VYNPLLF  L  LL++TCF C HF     +VEK VS+L+
Sbjct: 64   TCGQRSTNCTGHCGHIDLISPVYNPLLFNFLHKLLQRTCFFCFHFRADSNQVEKFVSQLE 123

Query: 433  LIMKGDIVGANSIGVSKGDLDSSDENAAGHVKD-ATDRSRASSDNSKHLNEQNWTSLQYG 609
            LI+KGD+VGA  +        S  E++ G  +  +T  S A   N++   +  WTSLQ  
Sbjct: 124  LIIKGDVVGAKRLDSFSPIEASLPEDSDGSSESCSTIHSGARHPNNEQSKQSEWTSLQLS 183

Query: 610  HAVSFLEEFMKKRSKKCTGCGVRCPTITNPTFGWMYM-NASSTTIRSNIIGRAVLDKPII 786
             A+S L  F+K  SKKC  C    P I  PTFGW +    S+  IRSN+I +  ++ P  
Sbjct: 184  EAMSILNNFLKLESKKCKNCSASNPNIRKPTFGWFHWAGLSNAAIRSNLIKQQTIEGPFG 243

Query: 787  AEAEQEVITSGVRTFDGVSARGTEVDSGDTQSAGAVYDSPPVSSAKAKKDKVGNASSEFS 966
               E+ +                  D+ D   + +  +S    + K  +        +F+
Sbjct: 244  GAFEELI------------------DAEDATKSPSNKESATNRNLKEHQ----KLQHQFT 281

Query: 967  KQMKSFSGPLLPSEAEQHIKLLWDNETQLCSLISDIHQEILSISEKKRSYSMFFIEALLV 1146
             Q  + S  LLPSEA   +KLLW NE +LCSL+SDI Q+   + +KK  +SMFF+  +LV
Sbjct: 282  SQKDALSSQLLPSEAMDILKLLWKNEARLCSLMSDIQQQ--GVGKKKAGHSMFFLNTVLV 339

Query: 1147 PPIKFRPITMGGDSVTNHPQTVLLSKILQSSIDLGNAHMY-DRSKVVTRWLDLQQSVNFL 1323
            PPIKFRP T GGDSV  HP +VLLSK+L+ +  L +AH   D   +  RWL+LQQS+N L
Sbjct: 340  PPIKFRPPTKGGDSVMEHPLSVLLSKVLELNGSLADAHRSNDFPLIARRWLELQQSLNVL 399

Query: 1324 FGNKKSIGQKDNTGIGICQVLEKKEGIFRQKMMGKRVNYSCRSVISPDPYLAVNEIGIPP 1503
            F +  + GQKD    GICQ+LEKKEG+FRQKMMGKRVNY+CRSVISPDPYL VNEIGIPP
Sbjct: 400  FDSNTAKGQKDVIS-GICQILEKKEGMFRQKMMGKRVNYACRSVISPDPYLDVNEIGIPP 458

Query: 1504 CFALKLTYPERVTPWNVDKLRSAIRNGPDIHPGATHYFDQ-TLSILPPSKKMRTSISRKL 1680
            CFA+KLTYPERVTPWNV KLR+A+ NG + HPGATHY D+ + + LP ++KMR S++RKL
Sbjct: 459  CFAVKLTYPERVTPWNVAKLRNAVINGAESHPGATHYVDKLSTTKLPLNRKMRVSVARKL 518

Query: 1681 PSSKGVVAQLGKSVKHEHEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLPGEKTL 1860
                      G+SV +E+EGK+VYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVL GEKTL
Sbjct: 519  S---------GRSVDYEYEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTL 569

Query: 1861 RMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYQIVNANNQYIIPTSGDTKRGLIQDHI 2040
            RMHYANCSTYNADFDGDEMNVHFPQDE+SRAE Y IVNANNQY+ P++G+  R LIQDHI
Sbjct: 570  RMHYANCSTYNADFDGDEMNVHFPQDEVSRAEGYNIVNANNQYVRPSNGEPIRSLIQDHI 629

Query: 2041 VSAVLLTKKDTFLTREEYTYLLYSSGVSAAPRSSFVGKSGRKVSMLCSEDEMELVVPAIL 2220
            +SAVLLTKKDTFLT +E   LLYSSGVS A  +SF GK+GRKV  L  EDE+E V PAI 
Sbjct: 630  ISAVLLTKKDTFLTEDEVYQLLYSSGVSNARPTSFSGKAGRKVIFLSYEDEIETVDPAIR 689

Query: 2221 KPEPLWTGKQVITSLLNHMTKKKGLSPFTFEAKCTIDKDFLTS----------------- 2349
            KP  LW+GKQ+IT++LNH+T  +G  PFT E    +  DF  S                 
Sbjct: 690  KPIYLWSGKQLITAVLNHIT--RGHPPFTVEKGGKLSYDFFKSKIKNGKSSNGEKVGVSK 747

Query: 2350 ---QSGSGKVN-------DPPFQIHENDFLNGVIDKAQFGKYGLIHTVQELYGPDTAGSL 2499
               +  SGKVN       D    I  N  + GVIDKAQFG+YGL+HTVQEL+G   AG+L
Sbjct: 748  PMKEKESGKVNPKENQLEDDKMIIFRNVLVQGVIDKAQFGEYGLVHTVQELFGAKAAGTL 807

Query: 2500 LSGLSRLFTLFLQLHGFTCGIDDLLLKRNIDIMRRRKLQDAKLVDKEAYLKFTNTKDEST 2679
            LS  SRLFT +LQ+HGFTCG+DDLL+ +  D  R+++L++ +   ++ + KF   KD   
Sbjct: 808  LSVFSRLFTAYLQMHGFTCGVDDLLITKIKDDERKKQLENCEKCGEQIHRKFIGIKD--- 864

Query: 2680 NNFGENVNADSILLDAGERRKLQDGIEKAVRVHGESAIKLLDKYMTNAAHTLLNEVNSIV 2859
                EN+  D +        +LQ  IEK +R  GESA+  LD+ MT       NE+NS  
Sbjct: 865  ----ENIKIDPL--------ELQSNIEKTIRSDGESALTYLDRQMT-------NELNS-- 903

Query: 2860 FSNKSKDQSANKLKDKSEELGLSKAFPRNCFFLMTVSGAKGSQVNFXXXXXXXXXXXXEG 3039
               K+     N+L  +    GL K   +NC  LMT SGAKGS+VNF            EG
Sbjct: 904  ---KTSSGVINELLSE----GLLKPSGKNCISLMTTSGAKGSKVNFQQISSFLGQQELEG 956

Query: 3040 KRVPLMISGKTLPCFPPWDPALRAGGFITDCFLTGLRPQEYYFHCMAGREGLVDTAVKTS 3219
            KRVP M+SGKTLPCF PWD A RAGG+I D FLTGLRPQEYYFHCMAGREGLVDTAVKTS
Sbjct: 957  KRVPRMVSGKTLPCFHPWDWAARAGGYIIDRFLTGLRPQEYYFHCMAGREGLVDTAVKTS 1016

Query: 3220 RSGYLQRCLVKSLECLKVNYDHTVRDADGSVVQFCYGEDGVDVHKTSFISKFDTIASNPR 3399
            RSGYLQRCL+K+LECL++ YDHTVRDADGS+VQF YGEDGVDVH+T FI+KF+ +A+N  
Sbjct: 1017 RSGYLQRCLIKNLECLRIGYDHTVRDADGSIVQFYYGEDGVDVHQTGFIAKFEALAANRE 1076

Query: 3400 VFRER 3414
            +  E+
Sbjct: 1077 IIYEK 1081


>ref|XP_003537204.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Glycine
            max]
          Length = 1653

 Score = 1147 bits (2968), Expect = 0.0
 Identities = 635/1143 (55%), Positives = 778/1143 (68%), Gaps = 19/1143 (1%)
 Frame = +1

Query: 58   MAHRAELATDSVDSVKFSFLTTEEVRKYSFKKITQVQLFDNLDSPVPGGLYDPALGPLRD 237
            M    E AT+SV++V FSFLT +E+R+ S  KIT   L D L  PVP GLYD ALGP  D
Sbjct: 1    MVLTTEGATNSVEAVAFSFLTDDEIRRSSRVKITSPILVDFLLHPVPDGLYDAALGPFDD 60

Query: 238  KANCRSCGQRALDCPGHCGHIELVSLVYNPLLFTILQNLLKKTCFSCHHFTDKREEVEKC 417
            K+ C+SCGQ +  CPGH GHIELVS VYNPL+F IL N+L++TCF+CHHF    +EV+  
Sbjct: 61   KSLCKSCGQTSKHCPGHFGHIELVSPVYNPLMFNILSNILQRTCFTCHHFRAPSKEVDIR 120

Query: 418  VSKLQLIMKGDIVGANSIG--VSKGDLDSSDENAAGHVKDATDRSRASSDNSKHLNEQNW 591
             S+L+LIMKGDI+ A  +   +    +DS + + + H  D  D S+  S  ++ L E NW
Sbjct: 121  TSQLELIMKGDIIRAKRLESIIPGKSVDSFNPDESIHPGDG-DESQCYS--AEQLGE-NW 176

Query: 592  TSLQYGHAVSFLEEFMKKRSKKCTGCGVRCPTITNPTFGWMYMNASSTTIRSNIIGRAVL 771
            TSLQ+  A+S L + + K+ KKC  CG + P I+ PTFGW +MN  S         RA  
Sbjct: 177  TSLQFSEAMSVLRKLLTKKHKKCQKCGAKNPKISKPTFGWFHMNVLSADET-----RADT 231

Query: 772  DKPIIAEAEQEVITSGVRTFDGVSARGTEVDSGDTQSAGAVYDSPPVSSAKAKKDKVGNA 951
             + + +E   + I+ G          G   D  D  SAG         +AK  K K    
Sbjct: 232  IRSVESETTNDDISLG---------GGDTTDVEDITSAG---------TAKRDKRKKEKL 273

Query: 952  SSEFSKQMKSFSGPLLPSEAEQHIKLLWDNETQLCSLISDIHQEILSISEKKRSYSMFFI 1131
            S + ++Q K  SG LLPS+ +  ++LLW+NE +LCS I+DI  +      KK  +SMFF+
Sbjct: 274  SYKLAEQNK-LSGSLLPSQVKGILELLWENEARLCSYINDIQDQGFG---KKAGHSMFFL 329

Query: 1132 EALLVPPIKFRPITMGGDSVTNHPQTVLLSKILQSSIDLGNAHMY--DRSKVVTRWLDLQ 1305
            E + VPPIKFRP T GGD+V  HPQTVLL+K+LQ +I LG+AH+   D SKV++RW+DLQ
Sbjct: 330  ENIFVPPIKFRPPTKGGDNVMEHPQTVLLTKVLQCNISLGDAHLNKSDPSKVLSRWMDLQ 389

Query: 1306 QSVNFLFGNKKSIGQ-KDNTGIGICQVLEKKEGIFRQKMMGKRVNYSCRSVISPDPYLAV 1482
            QSVN LF NK + G+ K +   GICQ+LEKKEGIFRQKMMGKRVN++CRSVISPDPYLAV
Sbjct: 390  QSVNMLFDNKTASGESKRDVATGICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPYLAV 449

Query: 1483 NEIGIPPCFALKLTYPERVTPWNVDKLRSAIRNGPDIHPGATHYFDQTLSI-LPPSKKMR 1659
            NEIGIPP FAL+L+YPERVTPWNV KLR+AI NGP+ HPGATHY D+   + LPP  K+ 
Sbjct: 450  NEIGIPPYFALRLSYPERVTPWNVVKLRNAILNGPESHPGATHYADKVSIVKLPPKGKLL 509

Query: 1660 TSISRKLPSSKGVVAQLGKSVKHEHEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRV 1839
            +  SRKLP+S+GV+   GK   HE EGKVVYRHL+DGD+VLVNRQPTLHKPSIMAH+VRV
Sbjct: 510  SLTSRKLPTSRGVILHQGKISDHEFEGKVVYRHLKDGDVVLVNRQPTLHKPSIMAHIVRV 569

Query: 1840 LPGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYQIVNANNQYIIPTSGDTKR 2019
            L GEKT+RMHYANCSTYNADFDGDE+NVHFPQDEISRAEAY IVNANNQY+ PTSGD  R
Sbjct: 570  LKGEKTVRMHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVKPTSGDPIR 629

Query: 2020 GLIQDHIVSAVLLTKKDTFLTREEYTYLLYSSGVSAAPRSSFVGKSGRKVSMLCSEDEME 2199
             LIQDHIVSA LLTKKDTFL+ EE+  LLYSSGVS A   SF GK G+KV +  SE EM 
Sbjct: 630  ALIQDHIVSAALLTKKDTFLSYEEFNQLLYSSGVSMAGLGSFYGKHGQKVFISNSESEMF 689

Query: 2200 LVVPAILKPEPLWTGKQVITSLLNHMTKKKGLSPFTFEAKCTIDKDFLTSQSGSG----- 2364
            L  PAI KPEPLWTGKQVI++LL ++T  +G  PFT E    I  +F  +Q   G     
Sbjct: 690  LFPPAIWKPEPLWTGKQVISALLYYIT--RGSPPFTAEKNAKIPSNFFKTQIRKGKRYTE 747

Query: 2365 ---KVNDPPFQ----IHENDFLNGVIDKAQFGKYGLIHTVQELYGPDTAGSLLSGLSRLF 2523
               K  D P +    I++ND + GV+DKAQFG YG+IHTVQELYG + AG+LLS LSRLF
Sbjct: 748  DTSKKKDKPDEDKLLIYKNDLVRGVVDKAQFGDYGMIHTVQELYGSNVAGNLLSALSRLF 807

Query: 2524 TLFLQLHGFTCGIDDLLLKRNIDIMRRRKLQDAKLVDKEAYLKFTNTKDESTNNFGENVN 2703
            T FLQ+HGFTCG+DDL+L    D+ R  +L+  +++    + +F   K           N
Sbjct: 808  TTFLQMHGFTCGVDDLMLTEGKDVERMNQLKSCEIIGDSVHREFIGVK-----------N 856

Query: 2704 ADSILLDAGERRKLQDGIEKAVRVHGESAIKLLDKYMTNAAHTLLNEVNSIVFSNKSKDQ 2883
            +D+I     +   LQ  IEK +R +GE+A+  LD+ MT               SN +   
Sbjct: 857  SDNI-----DPVTLQLNIEKKIRSNGEAAL-TLDRKMT---------------SNLNSRT 895

Query: 2884 SANKLKDKSEELGLSKAFPRNCFFLMTVSGAKGSQVNFXXXXXXXXXXXXEGKRVPLMIS 3063
            S+  LK    E G+ K   +NC  LMT SGAKGS VNF            EGKRVP M+S
Sbjct: 896  SSGILKKLLSE-GILKPSGKNCISLMTTSGAKGSMVNFQQISSHLGQQELEGKRVPRMVS 954

Query: 3064 GKTLPCFPPWDPALRAGGFITDCFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRC 3243
            GKTLPCFPPWD + RAGGFI D FLT L PQEYYFHCMAGREGLVDTAVKTSRSGYLQRC
Sbjct: 955  GKTLPCFPPWDCSPRAGGFIIDRFLTALHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRC 1014

Query: 3244 LVKSLECLKVNYDHTVRDADGSVVQFCYGEDGVDVHKTSFISKFDTIASNPR-VFRERLR 3420
            L+K+LECLKV YDHTVRDADGS++QF YGEDGVDVH+TSFI++F  +++N   VF    R
Sbjct: 1015 LMKNLECLKVCYDHTVRDADGSIIQFHYGEDGVDVHQTSFITEFGALSTNKELVFSNYCR 1074

Query: 3421 NLE 3429
             L+
Sbjct: 1075 QLD 1077