BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00015651
         (768 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631528.1| PREDICTED: pentatricopeptide repeat-containi...   210   2e-52
gb|AFK33630.1| unknown [Lotus japonicus]                              199   5e-49
ref|XP_003516509.1| PREDICTED: pentatricopeptide repeat-containi...   198   9e-49
ref|XP_002519945.1| pentatricopeptide repeat-containing protein,...   196   5e-48
ref|XP_003612457.1| Pentatricopeptide repeat-containing protein ...   194   2e-47

>ref|XP_003631528.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31790-like [Vitis vinifera]
          Length = 414

 Score =  210 bits (535), Expect = 2e-52
 Identities = 110/212 (51%), Positives = 140/212 (66%), Gaps = 1/212 (0%)
 Frame = +2

Query: 2   LGFGKQVHGLVLKMKNDVGNKRGRCSNELLFGSLFVDFYGKLGCITSARCVFDKMRLRDT 181
           L  GKQVHG +LK+        G  +N L      + FYGK  C+  A  VFD+   R+T
Sbjct: 200 LTLGKQVHGWLLKV--------GYATN-LFLSCYLISFYGKFRCLDDADFVFDQTSERNT 250

Query: 182 VVWTSMIVVCSRQDQFKEALEVFKEMGREGMKKNNYTLSSVIRVCGRMGDEG-SGRQVHG 358
           V+WT+ +V   + +   EAL  F EMGR G+K+N +T SSV+R CGRM D G  GR +H 
Sbjct: 251 VIWTAKMVNKCQGEYMHEALVAFTEMGRAGVKRNEFTYSSVLRACGRMKDHGRCGRLIHA 310

Query: 359 NAIKLGVELDQFVQCSLVDMYGRCGMLKDARKVFEMATGKDKKRRNDACWNAMLTGYAQR 538
           + IKLG+E D +VQC LVDMYG+CG+L +AR+VFE  T  D  + N  CWNAMLTGY + 
Sbjct: 311 STIKLGLESDIYVQCGLVDMYGKCGLLVEARRVFE--TVSDTNKTNIVCWNAMLTGYIRH 368

Query: 539 GFYDEAIKFLYQMKLAGVEPPESLLNQVRIDC 634
           G Y EAIKFLYQMK AG++P ESLLN++RI C
Sbjct: 369 GLYIEAIKFLYQMKAAGIQPQESLLNELRIAC 400



 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 48/179 (26%), Positives = 82/179 (45%), Gaps = 6/179 (3%)
 Frame = +2

Query: 116 YGKLGCITSARCVFDKMRL--RDTVVWTSMIVVCSRQDQFKEALEVFKEM----GREGMK 277
           Y   G I +AR +FDKM +  ++++ W  M+        ++EA+ +F +M        ++
Sbjct: 122 YVSCGLIHTARHMFDKMNVLNKNSISWAIMLAAYMDNGFYEEAIFLFVQMMELHSTIMLE 181

Query: 278 KNNYTLSSVIRVCGRMGDEGSGRQVHGNAIKLGVELDQFVQCSLVDMYGRCGMLKDARKV 457
              +    V++ C    +   G+QVHG  +K+G   + F+ C L+  YG+   L DA  V
Sbjct: 182 LPAWIFICVLKACVHTMNLTLGKQVHGWLLKVGYATNLFLSCYLISFYGKFRCLDDADFV 241

Query: 458 FEMATGKDKKRRNDACWNAMLTGYAQRGFYDEAIKFLYQMKLAGVEPPESLLNQVRIDC 634
           F+  +      RN   W A +    Q  +  EA+    +M  AGV+  E   + V   C
Sbjct: 242 FDQTS-----ERNTVIWTAKMVNKCQGEYMHEALVAFTEMGRAGVKRNEFTYSSVLRAC 295


>gb|AFK33630.1| unknown [Lotus japonicus]
          Length = 356

 Score =  199 bits (506), Expect = 5e-49
 Identities = 104/209 (49%), Positives = 138/209 (66%), Gaps = 1/209 (0%)
 Frame = +2

Query: 11  GKQVHGLVLKMKNDVGNKRGRCSNELLFGSLFVDFYGKLGCITSARCVFDKMRLRDTVVW 190
           G QVHG +LK+        G C + LL  SL + FYG+  C+  A  VF+K+   +T  W
Sbjct: 152 GMQVHGWLLKL--------GTCDHVLLSSSL-IRFYGRFTCVKDANAVFNKLSRHNTSTW 202

Query: 191 TSMIVVCSRQDQFKEALEVFKEMGREGMKKNNYTLSSVIRVCGRMGDEG-SGRQVHGNAI 367
           T+ IV   R+  F E    FKEMGR+G+KK+ YT SSV++ CG+M D G  G QVH +A+
Sbjct: 203 TAKIVSGCREMDFPEVFNDFKEMGRQGIKKDTYTFSSVLKACGKMMDHGRCGEQVHADAM 262

Query: 368 KLGVELDQFVQCSLVDMYGRCGMLKDARKVFEMATGKDKKRRNDACWNAMLTGYAQRGFY 547
           KLG+  D +VQCSL+ MYGR G+L+DA++VFE +    +  RN   WNAML GY + G Y
Sbjct: 263 KLGLASDNYVQCSLIAMYGRSGLLRDAKQVFETS----RSERNVDSWNAMLMGYLENGLY 318

Query: 548 DEAIKFLYQMKLAGVEPPESLLNQVRIDC 634
            EA+KFLYQMK AG++P ESLL++VRI C
Sbjct: 319 IEAVKFLYQMKAAGLKPHESLLDKVRIAC 347



 Score = 55.8 bits (133), Expect = 1e-05
 Identities = 42/171 (24%), Positives = 74/171 (43%), Gaps = 2/171 (1%)
 Frame = +2

Query: 128 GCITSARCVFDKMRLRDTVVWTSMIVVCSRQDQFKEALEVFKEMGRE-GMKK-NNYTLSS 301
           G +  A  +FD M ++D   W ++ +       ++EA++VF  M  + GM +   +  + 
Sbjct: 79  GLLDYACQLFDAMPVKDFNSWATLFIAYYDNADYEEAIDVFLAMLHQLGMSEFPPWICAC 138

Query: 302 VIRVCGRMGDEGSGRQVHGNAIKLGVELDQFVQCSLVDMYGRCGMLKDARKVFEMATGKD 481
            ++ C  + +   G QVHG  +KLG      +  SL+  YGR   +KDA  VF   +   
Sbjct: 139 FLKACACIENIPLGMQVHGWLLKLGTCDHVLLSSSLIRFYGRFTCVKDANAVFNKLS--- 195

Query: 482 KKRRNDACWNAMLTGYAQRGFYDEAIKFLYQMKLAGVEPPESLLNQVRIDC 634
             R N + W A +    +   + E      +M   G++      + V   C
Sbjct: 196 --RHNTSTWTAKIVSGCREMDFPEVFNDFKEMGRQGIKKDTYTFSSVLKAC 244


>ref|XP_003516509.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31790-like [Glycine max]
          Length = 423

 Score =  198 bits (504), Expect = 9e-49
 Identities = 103/209 (49%), Positives = 139/209 (66%), Gaps = 1/209 (0%)
 Frame = +2

Query: 11  GKQVHGLVLKMKNDVGNKRGRCSNELLFGSLFVDFYGKLGCITSARCVFDKMRLRDTVVW 190
           G QVHG +LK+        G C + LL  SL ++FYG+  C+  A  VFD +   +T+ W
Sbjct: 219 GMQVHGWLLKL--------GTCDHVLLSSSL-INFYGRFTCLEDASVVFDGVSRHNTLTW 269

Query: 191 TSMIVVCSRQDQFKEALEVFKEMGREGMKKNNYTLSSVIRVCGRM-GDEGSGRQVHGNAI 367
           T+ IV   R+  F E  + FKEMG  G+KK+ +T SSV++ CGRM   E  G QVH +AI
Sbjct: 270 TAKIVSGCRERHFSEVFDDFKEMGMRGVKKDCFTFSSVLKACGRMLNQERCGEQVHVDAI 329

Query: 368 KLGVELDQFVQCSLVDMYGRCGMLKDARKVFEMATGKDKKRRNDACWNAMLTGYAQRGFY 547
           KLG+  D +VQCSL+ MYGRCG+L+DA++VFEM+    ++ R   CWNAML GY Q G Y
Sbjct: 330 KLGLVSDHYVQCSLIAMYGRCGLLEDAKRVFEMS----QEERKVDCWNAMLMGYIQNGLY 385

Query: 548 DEAIKFLYQMKLAGVEPPESLLNQVRIDC 634
            EA+KFLYQM+ AG++P ESLL ++R+ C
Sbjct: 386 IEAVKFLYQMQAAGMQPRESLLKKLRMAC 414



 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 2/158 (1%)
 Frame = +2

Query: 128 GCITSARCVFDKMRLRDTVVWTSMIVVCSRQDQFKEALEVFKEMGRE--GMKKNNYTLSS 301
           G + +AR +FDKMR+RD   W ++ V       ++EA  VF  M  +   M+   +  + 
Sbjct: 146 GLLENARHMFDKMRVRDFNTWATLFVAYYDNTDYEEATNVFVNMLTQLGMMEFPPWIWAC 205

Query: 302 VIRVCGRMGDEGSGRQVHGNAIKLGVELDQFVQCSLVDMYGRCGMLKDARKVFEMATGKD 481
           ++R C    +   G QVHG  +KLG      +  SL++ YGR   L+DA  VF+  +   
Sbjct: 206 LLRACACTVNVPLGMQVHGWLLKLGTCDHVLLSSSLINFYGRFTCLEDASVVFDGVS--- 262

Query: 482 KKRRNDACWNAMLTGYAQRGFYDEAIKFLYQMKLAGVE 595
             R N   W A +    +   + E      +M + GV+
Sbjct: 263 --RHNTLTWTAKIVSGCRERHFSEVFDDFKEMGMRGVK 298


>ref|XP_002519945.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540991|gb|EEF42549.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 403

 Score =  196 bits (498), Expect = 5e-48
 Identities = 99/212 (46%), Positives = 137/212 (64%), Gaps = 1/212 (0%)
 Frame = +2

Query: 2   LGFGKQVHGLVLKMKNDVGNKRGRCSNELLFGSLFVDFYGKLGCITSARCVFDKMRLRDT 181
           +  GKQVHG++ K+           ++E+ F    +DFYGKLGC+     VF+K+   +T
Sbjct: 201 ISLGKQVHGILFKVG---------LTSEISFNVSLMDFYGKLGCLEDVNSVFNKLDNHNT 251

Query: 182 VVWTSMIVVCSRQDQFKEALEVFKEMGREGMKKNNYTLSSVIRVCGRMGDEGS-GRQVHG 358
             WT+ IV   R  +F E +E FKEMG  G+K+N++T+SSV+R C RMGD G+ G+QVH 
Sbjct: 252 ATWTAKIVNSCRNQRFYEVIEDFKEMGEAGIKRNSFTVSSVLRACARMGDGGNCGKQVHV 311

Query: 359 NAIKLGVELDQFVQCSLVDMYGRCGMLKDARKVFEMATGKDKKRRNDACWNAMLTGYAQR 538
             IKLG+E D FVQC L+ MYG+CGM++ A+KVFE+   K     N ACWNA+L  Y + 
Sbjct: 312 IVIKLGLESDAFVQCGLIAMYGKCGMIRKAKKVFELVIDK----TNTACWNALLMAYVRN 367

Query: 539 GFYDEAIKFLYQMKLAGVEPPESLLNQVRIDC 634
             + EA+K LYQM+ A ++  ESLL+ VRI C
Sbjct: 368 ELFIEAMKLLYQMEAAKIQVNESLLDHVRIAC 399



 Score = 63.2 bits (152), Expect = 6e-08
 Identities = 46/179 (25%), Positives = 79/179 (44%), Gaps = 10/179 (5%)
 Frame = +2

Query: 128 GCITSARCVFDKMRLR-DTVVWTSMIVVCSRQDQFKEALEVFKEMGRE---------GMK 277
           G +  AR +FDKM L+ D + W  +IV C    +++  + +F +M  +          + 
Sbjct: 123 GQLDIARNLFDKMPLKKDFISWVIVIVGCFSNSKYEAGINLFIDMLLQHSVYDGLMFDLN 182

Query: 278 KNNYTLSSVIRVCGRMGDEGSGRQVHGNAIKLGVELDQFVQCSLVDMYGRCGMLKDARKV 457
             N  +  +I+ C    +   G+QVHG   K+G+  +     SL+D YG+ G L+D   V
Sbjct: 183 TWNIIILCIIKCCIYSMNISLGKQVHGILFKVGLTSEISFNVSLMDFYGKLGCLEDVNSV 242

Query: 458 FEMATGKDKKRRNDACWNAMLTGYAQRGFYDEAIKFLYQMKLAGVEPPESLLNQVRIDC 634
           F           N A W A +    +   + E I+   +M  AG++     ++ V   C
Sbjct: 243 FNKL-----DNHNTATWTAKIVNSCRNQRFYEVIEDFKEMGEAGIKRNSFTVSSVLRAC 296


>ref|XP_003612457.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355513792|gb|AES95415.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 418

 Score =  194 bits (493), Expect = 2e-47
 Identities = 103/209 (49%), Positives = 138/209 (66%), Gaps = 1/209 (0%)
 Frame = +2

Query: 11  GKQVHGLVLKMKNDVGNKRGRCSNELLFGSLFVDFYGKLGCITSARCVFDKMRLRDTVVW 190
           G QVHG +LK+        G C + L+  SL + FYG+  C+  A  VF+++   +T+ W
Sbjct: 214 GMQVHGCLLKL--------GACDHVLISSSL-IRFYGRFKCLEDANMVFNRVSRHNTLTW 264

Query: 191 TSMIVVCSRQDQFKEALEVFKEMGREGMKKNNYTLSSVIRVCGRMGDEGS-GRQVHGNAI 367
           T+ IV   R+  F EAL  FK+MGR G+KK+++T SSV++ CGRM + GS G QVH +AI
Sbjct: 265 TAKIVSSCRERHFSEALGDFKKMGRVGVKKDSFTFSSVLKACGRMQNRGSCGEQVHADAI 324

Query: 368 KLGVELDQFVQCSLVDMYGRCGMLKDARKVFEMATGKDKKRRNDACWNAMLTGYAQRGFY 547
           KLG++ D +VQCSL+ MYGR G+L+DA  VFEM     +  RN    NAML GY Q G Y
Sbjct: 325 KLGLDSDSYVQCSLIAMYGRSGLLRDAELVFEMT----RNERNVDSLNAMLMGYIQNGLY 380

Query: 548 DEAIKFLYQMKLAGVEPPESLLNQVRIDC 634
            EA+KF+YQMK AGV+P E LL ++RI C
Sbjct: 381 IEAVKFVYQMKAAGVQPHEPLLEKLRIAC 409



 Score = 66.6 bits (161), Expect = 5e-09
 Identities = 47/173 (27%), Positives = 75/173 (43%), Gaps = 4/173 (2%)
 Frame = +2

Query: 128 GCITSARCVFDKMRLRDTVVWTSMIVVCSRQDQFKEALEVFKEMGRE----GMKKNNYTL 295
           G + +AR VFD M +RD   W ++ V      +++ A++VF  M  +    G     +  
Sbjct: 139 GLLENARRVFDVMSVRDFHSWATLFVSYYENGEYENAIDVFVSMLCQLDVMGFSFPPWIW 198

Query: 296 SSVIRVCGRMGDEGSGRQVHGNAIKLGVELDQFVQCSLVDMYGRCGMLKDARKVFEMATG 475
           S +++ C    +   G QVHG  +KLG      +  SL+  YGR   L+DA  VF   + 
Sbjct: 199 SCLLKACACTMNVPLGMQVHGCLLKLGACDHVLISSSLIRFYGRFKCLEDANMVFNRVS- 257

Query: 476 KDKKRRNDACWNAMLTGYAQRGFYDEAIKFLYQMKLAGVEPPESLLNQVRIDC 634
               R N   W A +    +   + EA+    +M   GV+      + V   C
Sbjct: 258 ----RHNTLTWTAKIVSSCRERHFSEALGDFKKMGRVGVKKDSFTFSSVLKAC 306