BLASTX nr result

ID: Aconitum21_contig00015612 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00015612
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298305.1| hypothetical protein POPTRDRAFT_172231 [Popu...   104   8e-21
ref|XP_002313370.1| hypothetical protein POPTRDRAFT_804496 [Popu...    90   2e-16
ref|XP_002275100.1| PREDICTED: chromodomain-helicase-DNA-binding...    85   7e-15
ref|XP_002531123.1| chromodomain helicase DNA binding protein, p...    84   2e-14
ref|XP_002313369.1| chromatin remodeling complex subunit [Populu...    79   4e-13

>ref|XP_002298305.1| hypothetical protein POPTRDRAFT_172231 [Populus trichocarpa]
           gi|222845563|gb|EEE83110.1| hypothetical protein
           POPTRDRAFT_172231 [Populus trichocarpa]
          Length = 419

 Score =  104 bits (259), Expect = 8e-21
 Identities = 54/104 (51%), Positives = 66/104 (63%), Gaps = 3/104 (2%)
 Frame = -3

Query: 367 GPSDPN--APGSMDRDSDPSQGPPFTSNFQNQRGYARHSAHQHMEGFQRDQDSGKSEAWK 194
           GPS  N  A GS+D+D D +  PP + NF+ QRGY   SA+   E   R  D+GK EAWK
Sbjct: 308 GPSHANGAAYGSVDKDGDSNNFPPLSRNFERQRGYKNASAYPMSEPINRGHDAGKFEAWK 367

Query: 193 RRRRVDADKHTQVQPPYQ-PLNNGNRPQDPSSLGILGRAPINKR 65
           RRRR +AD   Q QPP Q P++NG R  DP+SLGILG  P + R
Sbjct: 368 RRRRAEADIQPQFQPPLQRPISNGTRLSDPNSLGILGAGPADNR 411


>ref|XP_002313370.1| hypothetical protein POPTRDRAFT_804496 [Populus trichocarpa]
           gi|222849778|gb|EEE87325.1| hypothetical protein
           POPTRDRAFT_804496 [Populus trichocarpa]
          Length = 506

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 50/103 (48%), Positives = 63/103 (61%), Gaps = 2/103 (1%)
 Frame = -3

Query: 367 GPSDPN--APGSMDRDSDPSQGPPFTSNFQNQRGYARHSAHQHMEGFQRDQDSGKSEAWK 194
           GPS  N  A GS+D+DSDP+  PP + NF+ Q GY   SA+   E   +  D+GK EAWK
Sbjct: 388 GPSHANGAAYGSLDKDSDPNNFPPLSRNFERQIGYKNESAYAMSEPINKGHDAGKFEAWK 447

Query: 193 RRRRVDADKHTQVQPPYQPLNNGNRPQDPSSLGILGRAPINKR 65
           RRRR +AD    +QPP Q    G R  +P+SLGILG  P + R
Sbjct: 448 RRRRAEAD----IQPPLQ-RPPGTRLSNPNSLGILGAGPPDNR 485


>ref|XP_002275100.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Vitis
            vinifera]
          Length = 1764

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 47/99 (47%), Positives = 62/99 (62%), Gaps = 3/99 (3%)
 Frame = -3

Query: 352  NAPGSMDRDSDPSQGPPFTSNFQNQ-RGYARHSAHQHMEGFQRDQDSGKSEAWKRRRRVD 176
            +A G  D+DSDP Q P F  + +   RGY   SA+Q  E   +  D+GK EAWKRRRR D
Sbjct: 1640 SAWGPGDKDSDPGQFPSFHRHGERPPRGYKNMSAYQTAEPVSKSHDAGKFEAWKRRRRAD 1699

Query: 175  -ADKHTQVQP-PYQPLNNGNRPQDPSSLGILGRAPINKR 65
              + H+  QP P +P++NG+R  DP+SLGILG  P + R
Sbjct: 1700 NINTHSLTQPLPQRPMSNGSRLPDPNSLGILGSGPTDNR 1738


>ref|XP_002531123.1| chromodomain helicase DNA binding protein, putative [Ricinus
            communis] gi|223529287|gb|EEF31257.1| chromodomain
            helicase DNA binding protein, putative [Ricinus communis]
          Length = 1718

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 44/83 (53%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
 Frame = -3

Query: 280  QRGYARHSAHQHMEGFQRDQDSGKSEAWKRRRRVDADKHTQVQPPYQ-PLNNGNRPQDPS 104
            QRGY   +A+Q  +  Q+  D+GK EAWKRR+R +AD  +QVQPP Q P++NG R  DP+
Sbjct: 1625 QRGYKNMNAYQMSDPIQKGHDNGKFEAWKRRKRAEADMQSQVQPPLQRPMSNGARVTDPN 1684

Query: 103  SLGILGRAPINKRLVNRTDRPHQ 35
            SLGILG AP + R   R  R HQ
Sbjct: 1685 SLGILGAAPSDNR---RFFRMHQ 1704


>ref|XP_002313369.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222849777|gb|EEE87324.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 1748

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 42/90 (46%), Positives = 54/90 (60%)
 Frame = -3

Query: 334  DRDSDPSQGPPFTSNFQNQRGYARHSAHQHMEGFQRDQDSGKSEAWKRRRRVDADKHTQV 155
            D +SDP+  PP + NF+ Q GY   SA+   E   +  D+GK EAWKRRRR +AD    +
Sbjct: 1643 DANSDPNNFPPLSRNFERQIGYKNESAYAMSEPINKGHDAGKFEAWKRRRRAEAD----I 1698

Query: 154  QPPYQPLNNGNRPQDPSSLGILGRAPINKR 65
            QPP Q    G R  +P+SLGILG  P + R
Sbjct: 1699 QPPLQ-RPPGTRLSNPNSLGILGAGPPDNR 1727


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