BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00015564
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61725.1| hypothetical protein VITISV_032420 [Vitis vinifera]    95   7e-18
ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containi...    92   6e-17
ref|XP_003625591.1| Pentatricopeptide repeat-containing protein ...    79   3e-13
ref|NP_190904.1| pentatricopeptide repeat-containing protein [Ar...    77   1e-12
ref|XP_002876202.1| pentatricopeptide repeat-containing protein ...    76   3e-12

>emb|CAN61725.1| hypothetical protein VITISV_032420 [Vitis vinifera]
          Length = 763

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 56/126 (44%), Positives = 75/126 (59%), Gaps = 2/126 (1%)
 Frame = +3

Query: 54  MIKNLKPQQIASIFPNRVTLSSHFTTEQSSNHHIASLHKTHRFKEALQAFQHLRTNTHFS 233
           MIK L+PQ   +    + T+ S    EQSSN +I +L K   F EA++AF+ L+  T F 
Sbjct: 1   MIKALRPQVGFATNNVKETVLSKLRAEQSSNEYITTLCKQKLFNEAIKAFEFLQKKTGFC 60

Query: 234 VWPSTYAXXXXXXXXXXXXXFGRMVC-HDLRS-AQPDVILHNHVLNMYGKCGALEDARKV 407
           +  STYA              GR +  H L+S + PD+ L NH+LNMYGKCG+L+DA+KV
Sbjct: 61  LTLSTYAYLISACSYLRSLEHGRKIHDHMLKSKSHPDLTLQNHILNMYGKCGSLKDAQKV 120

Query: 408 FDEMPE 425
           FD MPE
Sbjct: 121 FDAMPE 126


>ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Vitis vinifera]
          Length = 755

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 55/126 (43%), Positives = 74/126 (58%), Gaps = 2/126 (1%)
 Frame = +3

Query: 54  MIKNLKPQQIASIFPNRVTLSSHFTTEQSSNHHIASLHKTHRFKEALQAFQHLRTNTHFS 233
           MIK L+PQ   +    + T+ S    EQSSN +I SL K   F EA++AF+ L+  T F 
Sbjct: 1   MIKALRPQVGFATNNVKETVLSKLRAEQSSNEYITSLCKQKLFNEAIKAFEFLQKKTGFC 60

Query: 234 VWPSTYAXXXXXXXXXXXXXFGRMVC-HDLRS-AQPDVILHNHVLNMYGKCGALEDARKV 407
           +  STYA              G+ +  H L+S + PD+ L NH+LNMYGKC +L+DA+KV
Sbjct: 61  LTLSTYAYLISACSYLRSLEHGKKIHDHMLKSKSHPDLTLQNHILNMYGKCKSLKDAQKV 120

Query: 408 FDEMPE 425
           FD MPE
Sbjct: 121 FDAMPE 126


>ref|XP_003625591.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355500606|gb|AES81809.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 887

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 51/126 (40%), Positives = 71/126 (56%), Gaps = 4/126 (3%)
 Frame = +3

Query: 54  MIKNLKPQQIASIFPNRVTLSSHFTTEQSSNHHIASLHKTHRFKEALQAFQ-HLR-TNTH 227
           M   +KP    +IF N        + E  +N +I  L K H +KEAL+AF  HL+ +N+H
Sbjct: 104 MYSYVKPSLQPAIFSN-------LSKELPTNSYIIFLCKQHHYKEALEAFDFHLKNSNSH 156

Query: 228 FSVWPSTYAXXXXXXXXXXXXXFGRMVC-HDLRSA-QPDVILHNHVLNMYGKCGALEDAR 401
           F   PSTY              + + +  H L+S  QP +IL NH++NMYGKCG+++DAR
Sbjct: 157 FE--PSTYTSLVLACANFRSLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDAR 214

Query: 402 KVFDEM 419
           KVFD M
Sbjct: 215 KVFDTM 220


>ref|NP_190904.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75174119|sp|Q9LFI1.1|PP280_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g53360, mitochondrial; Flags: Precursor
           gi|6729487|emb|CAB67643.1| putative protein [Arabidopsis
           thaliana] gi|332645554|gb|AEE79075.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 768

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 45/105 (42%), Positives = 61/105 (58%), Gaps = 2/105 (1%)
 Frame = +3

Query: 117 SHFTTEQSSNHHIASLHKTHRFKEALQAFQHLRTNTHFSVWPSTYAXXXXXXXXXXXXXF 296
           S   TE+  N HI SL K++ ++EAL+AF   + N+ F +   TY               
Sbjct: 26  STIKTEELMNDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQ 85

Query: 297 GRMVC-HDLRS-AQPDVILHNHVLNMYGKCGALEDARKVFDEMPE 425
           GR +  H L S  + D IL+NH+L+MYGKCG+L DAR+VFD MPE
Sbjct: 86  GRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPE 130


>ref|XP_002876202.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297322040|gb|EFH52461.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 769

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 46/115 (40%), Positives = 63/115 (54%), Gaps = 2/115 (1%)
 Frame = +3

Query: 87  SIFPNRVTLSSHFTTEQSSNHHIASLHKTHRFKEALQAFQHLRTNTHFSVWPSTYAXXXX 266
           S  P   ++ S   TE+  N HI SL +   ++EAL+AF   + N+ F +   TY     
Sbjct: 13  SQIPATSSVVSTIKTEELMNDHINSLCRNSFYREALEAFDFAQKNSSFKIRLRTYISLIC 72

Query: 267 XXXXXXXXXFGRMVC-HDLRS-AQPDVILHNHVLNMYGKCGALEDARKVFDEMPE 425
                     GR +  H L S  + D IL+NH+L+MYGKCG+L DAR+VFD MPE
Sbjct: 73  ACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPE 127