BLASTX nr result

ID: Aconitum21_contig00015507 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00015507
         (975 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514660.1| histone deacetylase hda1, putative [Ricinus ...    67   5e-14
dbj|BAB10370.1| unnamed protein product [Arabidopsis thaliana]         67   1e-13
ref|NP_001190583.1| histone deacetylase 5 [Arabidopsis thaliana]...    67   1e-13
ref|NP_200914.2| histone deacetylase 5 [Arabidopsis thaliana] gi...    67   1e-13
ref|XP_002866412.1| hypothetical protein ARALYDRAFT_919345 [Arab...    65   7e-13

>ref|XP_002514660.1| histone deacetylase hda1, putative [Ricinus communis]
           gi|223546264|gb|EEF47766.1| histone deacetylase hda1,
           putative [Ricinus communis]
          Length = 654

 Score = 67.0 bits (162), Expect(2) = 5e-14
 Identities = 34/59 (57%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
 Frame = +2

Query: 44  EVTLKSNILRPPGHHAEAGKARGLRQYNNVAIASIVLLIEKSELG-SKILMVGWDVHHG 217
           E+   + I+RPPGHHAE  KA G   +NNVA+A+  LL E  ELG  KIL+V WDVHHG
Sbjct: 132 ELDSAAAIVRPPGHHAEHDKAMGFCLFNNVAVAASFLLDENPELGIKKILIVDWDVHHG 190



 Score = 37.4 bits (85), Expect(2) = 5e-14
 Identities = 16/21 (76%), Positives = 16/21 (76%)
 Frame = +3

Query: 219 FWKDPGVLFFSVHRFYFGIKY 281
           FWKDP VLFFSVHR  FG  Y
Sbjct: 197 FWKDPRVLFFSVHRHEFGSFY 217


>dbj|BAB10370.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1108

 Score = 67.0 bits (162), Expect(2) = 1e-13
 Identities = 32/52 (61%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
 Frame = +2

Query: 65  ILRPPGHHAEAGKARGLRQYNNVAIASIVLLIEKSELG-SKILMVGWDVHHG 217
           I+RPPGHHAEA +A G   +NNVA+A+  LL E+ +LG  KIL+V WDVHHG
Sbjct: 827 IVRPPGHHAEADEAMGFCLFNNVAVAASFLLNERPDLGVKKILIVDWDVHHG 878



 Score = 35.8 bits (81), Expect(2) = 1e-13
 Identities = 14/19 (73%), Positives = 16/19 (84%)
 Frame = +3

Query: 216 VFWKDPGVLFFSVHRFYFG 272
           +FWKDP VLFFSVHR  +G
Sbjct: 884 MFWKDPRVLFFSVHRHEYG 902



 Score = 62.8 bits (151), Expect(2) = 2e-10
 Identities = 29/52 (55%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
 Frame = +2

Query: 65  ILRPPGHHAEAGKARGLRQYNNVAIASIVLLIEKSELG-SKILMVGWDVHHG 217
           I+RPPGHHAE+ +A G   +NNVA+A+  LL E+ +L   KIL+V WD+HHG
Sbjct: 184 IVRPPGHHAESDEAMGFCLFNNVAVAASFLLNERPDLDVKKILIVDWDIHHG 235



 Score = 29.3 bits (64), Expect(2) = 2e-10
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = +3

Query: 216 VFWKDPGVLFFSVHRFYFGIKY 281
           +FWKD  VL FSVHR   G  Y
Sbjct: 241 MFWKDSRVLIFSVHRHDHGSFY 262


>ref|NP_001190583.1| histone deacetylase 5 [Arabidopsis thaliana]
           gi|332010035|gb|AED97418.1| histone deacetylase 5
           [Arabidopsis thaliana]
          Length = 664

 Score = 67.0 bits (162), Expect(2) = 1e-13
 Identities = 32/52 (61%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
 Frame = +2

Query: 65  ILRPPGHHAEAGKARGLRQYNNVAIASIVLLIEKSELG-SKILMVGWDVHHG 217
           I+RPPGHHAEA +A G   +NNVA+A+  LL E+ +LG  KIL+V WDVHHG
Sbjct: 151 IVRPPGHHAEADEAMGFCLFNNVAVAASFLLNERPDLGVKKILIVDWDVHHG 202



 Score = 35.8 bits (81), Expect(2) = 1e-13
 Identities = 14/19 (73%), Positives = 16/19 (84%)
 Frame = +3

Query: 216 VFWKDPGVLFFSVHRFYFG 272
           +FWKDP VLFFSVHR  +G
Sbjct: 208 MFWKDPRVLFFSVHRHEYG 226


>ref|NP_200914.2| histone deacetylase 5 [Arabidopsis thaliana]
           gi|75247631|sp|Q8RX28.1|HDA5_ARATH RecName: Full=Histone
           deacetylase 5 gi|20259320|gb|AAM13986.1| putative
           histone deacetylase [Arabidopsis thaliana]
           gi|21539579|gb|AAM53342.1| histone deacetylase-like
           protein [Arabidopsis thaliana]
           gi|23197730|gb|AAN15392.1| histone deacetylase-like
           protein [Arabidopsis thaliana]
           gi|332010034|gb|AED97417.1| histone deacetylase 5
           [Arabidopsis thaliana]
          Length = 660

 Score = 67.0 bits (162), Expect(2) = 1e-13
 Identities = 32/52 (61%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
 Frame = +2

Query: 65  ILRPPGHHAEAGKARGLRQYNNVAIASIVLLIEKSELG-SKILMVGWDVHHG 217
           I+RPPGHHAEA +A G   +NNVA+A+  LL E+ +LG  KIL+V WDVHHG
Sbjct: 151 IVRPPGHHAEADEAMGFCLFNNVAVAASFLLNERPDLGVKKILIVDWDVHHG 202



 Score = 35.8 bits (81), Expect(2) = 1e-13
 Identities = 14/19 (73%), Positives = 16/19 (84%)
 Frame = +3

Query: 216 VFWKDPGVLFFSVHRFYFG 272
           +FWKDP VLFFSVHR  +G
Sbjct: 208 MFWKDPRVLFFSVHRHEYG 226


>ref|XP_002866412.1| hypothetical protein ARALYDRAFT_919345 [Arabidopsis lyrata subsp.
           lyrata] gi|297312247|gb|EFH42671.1| hypothetical protein
           ARALYDRAFT_919345 [Arabidopsis lyrata subsp. lyrata]
          Length = 660

 Score = 65.5 bits (158), Expect(2) = 7e-13
 Identities = 30/52 (57%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
 Frame = +2

Query: 65  ILRPPGHHAEAGKARGLRQYNNVAIASIVLLIEKSELG-SKILMVGWDVHHG 217
           I+RPPGHHAEA +A G   +NN+A+A+  LL ++ +LG  KIL+V WDVHHG
Sbjct: 151 IVRPPGHHAEADEAMGFCLFNNIAVAASYLLNQRPDLGVKKILIVDWDVHHG 202



 Score = 35.0 bits (79), Expect(2) = 7e-13
 Identities = 14/22 (63%), Positives = 17/22 (77%)
 Frame = +3

Query: 216 VFWKDPGVLFFSVHRFYFGIKY 281
           +FW+DP VLFFSVHR  +G  Y
Sbjct: 208 MFWEDPRVLFFSVHRHEYGSFY 229


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