BLASTX nr result

ID: Aconitum21_contig00014838 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00014838
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]    58   4e-09
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    57   9e-09
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...    52   8e-07

>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score = 58.2 bits (139), Expect(2) = 4e-09
 Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
 Frame = +2

Query: 62  FLVEDSSSGHLFQVY-KIESDTKRDKNGKLYLFERFVVFKFDTVKRNWTEICSLGSKVMF 238
           +LVE      L   Y  +  D + D+   +Y   RF V + D+    W  + SLG + +F
Sbjct: 255 YLVESGEELLLVTRYLDLTYDVEXDQTSLIYRTTRFQVCRLDSKAPRWEVVSSLGDRALF 314

Query: 239 LGSNGLILRSALDCPGCLPNCVYYTN 316
           LG N  +  S++D PGC  NC+YYT+
Sbjct: 315 LGENLSLSLSSVDFPGCKGNCIYYTD 340



 Score = 27.3 bits (59), Expect(2) = 4e-09
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 4/34 (11%)
 Frame = +3

Query: 369 GIYNLEDGTIQPHYLVLTCDPL----TSPIWLEP 458
           GI+NLEDG+I+P    L C         P+W+ P
Sbjct: 357 GIFNLEDGSIEP----LPCSHFRIRWPPPLWVTP 386


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 57.0 bits (136), Expect(2) = 9e-09
 Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
 Frame = +2

Query: 62  FLVEDSSSGHLFQVY-KIESDTKRDKNGKLYLFERFVVFKFDTVKRNWTEICSLGSKVMF 238
           +LVE      L   Y  +  D + D+   +Y   RF V + D     W  + SLG + +F
Sbjct: 255 YLVESGEELLLVTRYLDLTYDVEPDQTSLIYRTTRFQVCRLDLKAPRWEVVSSLGDRALF 314

Query: 239 LGSNGLILRSALDCPGCLPNCVYYTN 316
           LG N  +  S++D PGC  NC+YYT+
Sbjct: 315 LGENLSLSLSSVDFPGCKGNCIYYTD 340



 Score = 27.3 bits (59), Expect(2) = 9e-09
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 4/34 (11%)
 Frame = +3

Query: 369 GIYNLEDGTIQPHYLVLTCDPL----TSPIWLEP 458
           GI+NLEDG+I+P    L C         P+W+ P
Sbjct: 357 GIFNLEDGSIEP----LPCSHFRIRWPPPLWVTP 386


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 51.6 bits (122), Expect(2) = 8e-07
 Identities = 22/57 (38%), Positives = 32/57 (56%)
 Frame = +2

Query: 146 LYLFERFVVFKFDTVKRNWTEICSLGSKVMFLGSNGLILRSALDCPGCLPNCVYYTN 316
           +Y   RF VFK D     W  + SLG  ++F+G N  +  SA    GC+ +C+YYT+
Sbjct: 284 IYKTARFEVFKLDLNGPRWERVTSLGDMMLFIGENSSLALSASGLSGCMGDCIYYTD 340



 Score = 26.2 bits (56), Expect(2) = 8e-07
 Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 8/38 (21%)
 Frame = +3

Query: 369 GIYNLEDGTIQPHYLVLTCDPLTS--------PIWLEP 458
           GI+ L DG+I+P    L C P  S        P+W+ P
Sbjct: 357 GIFKLSDGSIEP----LPCYPRNSYSRLQWPPPLWISP 390


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