BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00014816
         (700 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subc...   176   4e-42
gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]     176   4e-42
gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subc...   174   1e-41
emb|CAD39797.2| OSJNBa0071G03.10 [Oryza sativa Japonica Group]        174   1e-41
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap...   174   2e-41

>gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1073

 Score =  176 bits (446), Expect = 4e-42
 Identities = 89/182 (48%), Positives = 117/182 (64%)
 Frame = +1

Query: 1   HALISELKNLFEKQARVERFETTKALFSCKLTEGNPVSHHVLKMIGYVDYLERLDIRVSQ 180
           H +I+ L+N+FE QAR ERF T+K+LF+C+L EGNPVS HV+KMIGY + L++L   +S+
Sbjct: 189 HTIITGLRNMFEDQARAERFNTSKSLFACRLAEGNPVSPHVIKMIGYTESLDKLGFPLSR 248

Query: 181 ELATDLILQSLPESYDQFVMNYIMNDLNKTVTELHGMLKTAEQNIKKTSSVLMVQXXXXX 360
           ELATDLILQSLP S++ F+MN+ MN+LN+T+ ELHGMLKTAE++IKK S+ +MV      
Sbjct: 249 ELATDLILQSLPPSFEPFIMNFNMNNLNRTLAELHGMLKTAEESIKKNSNHVMVM----H 304

Query: 361 XXXXXXXXXADXXXXXXXXXXXXXXXXXXXXXXXXTADQECFYCKKSGHWKRNCKKYLED 540
                                                D ECF+ K++GHWKRNCKKYLE 
Sbjct: 305 KRKPNNKKSGQKRKLNSDEITSTSNSKTKVQKTGPAKDAECFFYKETGHWKRNCKKYLEQ 364

Query: 541 KK 546
            K
Sbjct: 365 LK 366



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 29/43 (67%), Positives = 32/43 (74%)
 Frame = +2

Query: 572 QGLKESRKLGKGELDLRVGNGARVAAQAVGVFKLSLPSDLVLE 700
           QGLK SR L +G +D+RVGNG RVA  AVG   LSLPS LVLE
Sbjct: 409 QGLKRSRSLARGRVDIRVGNGERVAVVAVGTMTLSLPSGLVLE 451


>gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1063

 Score =  176 bits (446), Expect = 4e-42
 Identities = 89/182 (48%), Positives = 117/182 (64%)
 Frame = +1

Query: 1   HALISELKNLFEKQARVERFETTKALFSCKLTEGNPVSHHVLKMIGYVDYLERLDIRVSQ 180
           H +I+ L+N+FE QAR ERF T+K+LF+C+L EGNPVS HV+KMIGY + L++L   +S+
Sbjct: 189 HTIITGLRNMFEDQARAERFNTSKSLFACRLAEGNPVSPHVIKMIGYTESLDKLGFPLSR 248

Query: 181 ELATDLILQSLPESYDQFVMNYIMNDLNKTVTELHGMLKTAEQNIKKTSSVLMVQXXXXX 360
           ELATDLILQSLP S++ F+MN+ MN+LN+T+ ELHGMLKTAE++IKK S+ +MV      
Sbjct: 249 ELATDLILQSLPPSFEPFIMNFNMNNLNRTLAELHGMLKTAEESIKKNSNHVMVM----H 304

Query: 361 XXXXXXXXXADXXXXXXXXXXXXXXXXXXXXXXXXTADQECFYCKKSGHWKRNCKKYLED 540
                                                D ECF+ K++GHWKRNCKKYLE 
Sbjct: 305 KRKPNNKKSGQKRKLNSDEITSTSNSKTKVQKTGPAKDAECFFYKETGHWKRNCKKYLEQ 364

Query: 541 KK 546
            K
Sbjct: 365 LK 366



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 29/43 (67%), Positives = 32/43 (74%)
 Frame = +2

Query: 572 QGLKESRKLGKGELDLRVGNGARVAAQAVGVFKLSLPSDLVLE 700
           QGLK SR L +G +D+RVGNG RVA  AVG   LSLPS LVLE
Sbjct: 409 QGLKRSRSLARGRVDIRVGNGERVAVVAVGTMTLSLPSGLVLE 451


>gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 829

 Score =  174 bits (442), Expect = 1e-41
 Identities = 88/182 (48%), Positives = 117/182 (64%)
 Frame = +1

Query: 1   HALISELKNLFEKQARVERFETTKALFSCKLTEGNPVSHHVLKMIGYVDYLERLDIRVSQ 180
           H +I+ L+N+FE QAR ERF T+K+LF+C+L EGNPVS HV+K+IGY + L++L   +S+
Sbjct: 176 HTIITGLRNMFEDQARAERFNTSKSLFACRLAEGNPVSPHVIKIIGYTESLDKLGFPLSR 235

Query: 181 ELATDLILQSLPESYDQFVMNYIMNDLNKTVTELHGMLKTAEQNIKKTSSVLMVQXXXXX 360
           ELATDLILQSLP S++ F+MN+ MN+LN+T+ ELHGMLKTAE++IKK S+ +MV      
Sbjct: 236 ELATDLILQSLPPSFEPFIMNFNMNNLNRTLAELHGMLKTAEESIKKNSNHVMVM----H 291

Query: 361 XXXXXXXXXADXXXXXXXXXXXXXXXXXXXXXXXXTADQECFYCKKSGHWKRNCKKYLED 540
                                                D ECF+ K++GHWKRNCKKYLE 
Sbjct: 292 KRKPNNKKSGQKRKLNSDEITSTSNSKTKVQKTGPAKDAECFFYKETGHWKRNCKKYLEQ 351

Query: 541 KK 546
            K
Sbjct: 352 LK 353


>emb|CAD39797.2| OSJNBa0071G03.10 [Oryza sativa Japonica Group]
          Length = 948

 Score =  174 bits (442), Expect = 1e-41
 Identities = 88/182 (48%), Positives = 116/182 (63%)
 Frame = +1

Query: 1   HALISELKNLFEKQARVERFETTKALFSCKLTEGNPVSHHVLKMIGYVDYLERLDIRVSQ 180
           H +I+ L+N+FE QAR ERF T+K LF+ +L +GNPVS HV+KMIGY + L++L   +S+
Sbjct: 174 HTIITGLRNMFEDQARAERFNTSKFLFAYRLAQGNPVSPHVIKMIGYTESLDKLGFPLSR 233

Query: 181 ELATDLILQSLPESYDQFVMNYIMNDLNKTVTELHGMLKTAEQNIKKTSSVLMVQXXXXX 360
           ELATDLILQSLP S++ F+MN+ MN+LN+T+ ELHGMLKTAE++IKK S+ +MV      
Sbjct: 234 ELATDLILQSLPPSFEPFIMNFNMNNLNRTLAELHGMLKTAEESIKKNSNYVMVM----H 289

Query: 361 XXXXXXXXXADXXXXXXXXXXXXXXXXXXXXXXXXTADQECFYCKKSGHWKRNCKKYLED 540
                                                D ECF+CK++GHWKRNCKKYLE 
Sbjct: 290 KLKPNNKKSGQKRKLNSDEITSTSNCKTKVQKTGPAKDAECFFCKETGHWKRNCKKYLEQ 349

Query: 541 KK 546
            K
Sbjct: 350 LK 351


>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
           gi|62701883|gb|AAX92956.1| retrotransposon protein,
           putative, Ty1-copia sub-class [Oryza sativa Japonica
           Group] gi|108864259|gb|ABA92827.2| retrotransposon
           protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1184

 Score =  174 bits (441), Expect = 2e-41
 Identities = 88/182 (48%), Positives = 118/182 (64%)
 Frame = +1

Query: 1   HALISELKNLFEKQARVERFETTKALFSCKLTEGNPVSHHVLKMIGYVDYLERLDIRVSQ 180
           H +I+ L+N+FE QAR +RF T+K+LF+C+L EGNPVS HV+KMIGY + LE+L   +SQ
Sbjct: 97  HTIITGLRNMFEDQARAKRFNTSKSLFACRLAEGNPVSPHVIKMIGYNETLEKLGFPLSQ 156

Query: 181 ELATDLILQSLPESYDQFVMNYIMNDLNKTVTELHGMLKTAEQNIKKTSSVLMVQXXXXX 360
           ELATDLILQSLP S++ F++N+ MN++N+T+T+L GMLKTAE++IKK S+ +MV      
Sbjct: 157 ELATDLILQSLPPSFEPFILNFNMNNMNRTLTKLPGMLKTAEESIKKNSNHVMVM----- 211

Query: 361 XXXXXXXXXADXXXXXXXXXXXXXXXXXXXXXXXXTADQECFYCKKSGHWKRNCKKYLED 540
                                                D ECF+CK++GHWKRNCKKYLE 
Sbjct: 212 -----------------------HKRKPNNKKSGPAKDAECFFCKEAGHWKRNCKKYLEQ 248

Query: 541 KK 546
            K
Sbjct: 249 LK 250



 Score = 63.2 bits (152), Expect = 5e-08
 Identities = 32/43 (74%), Positives = 35/43 (81%)
 Frame = +2

Query: 572 QGLKESRKLGKGELDLRVGNGARVAAQAVGVFKLSLPSDLVLE 700
           QGLK SR L +GE+D+RVGNGARVAA AVG   LSLPS LVLE
Sbjct: 293 QGLKRSRSLARGEVDIRVGNGARVAAVAVGTMPLSLPSRLVLE 335