BLASTX nr result
ID: Aconitum21_contig00014655
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Aconitum21_contig00014655
(1078 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003531160.1| PREDICTED: KH domain-containing protein At4g... 94 2e-48
ref|XP_004134572.1| PREDICTED: KH domain-containing protein At4g... 88 8e-47
ref|XP_004169687.1| PREDICTED: KH domain-containing protein At4g... 88 8e-47
ref|XP_003593895.1| Heterogeneous nuclear ribonucleoprotein K [M... 93 2e-40
emb|CAN73780.1| hypothetical protein VITISV_042181 [Vitis vinifera] 100 9e-40
>ref|XP_003531160.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 625
Score = 94.4 bits (233), Expect(5) = 2e-48
Identities = 57/93 (61%), Positives = 66/93 (70%), Gaps = 1/93 (1%)
Frame = -3
Query: 491 KINDNDDRDTVYFCLLVLPKLISCVTGNSGAIINVIRKRTKADVRFQLSKDKKSKCAHED 312
KIND DD TV LLV K+I C+ G SG+IIN IRKRTKADVR +SK K KCA +
Sbjct: 379 KINDEDDT-TVSIRLLVPSKVIGCIIGKSGSIINEIRKRTKADVR--ISKGDKPKCADAN 435
Query: 311 DEPVEVMGEISRVRDAFIQVILRL-CDVLKDRD 216
DE VEV G + VRDA IQ+ILRL DVL++RD
Sbjct: 436 DELVEVGGSVDCVRDALIQIILRLRDDVLRERD 468
Score = 63.5 bits (153), Expect(5) = 2e-48
Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Frame = -1
Query: 880 YPSAGFYSTADSILPPQSVSSLMGASHVP*LYRYLDQGSAWRVY---CPGFLWCLVLVVP 710
YP G Y +D I+ P++V ++GA++VP L Y D G++W +Y P
Sbjct: 246 YPPGGLYPASDPIVTPRAVPQIIGATNVPDLQGYADAGNSWPMYSSALPVVSGVGASRSE 305
Query: 709 EFDIKLFYPHDQFGRVNAKGGSGIKSVRQ 623
E I++ P D+ GRV KGGS IKS+RQ
Sbjct: 306 ELIIRMLCPSDKIGRVIGKGGSTIKSMRQ 334
Score = 52.8 bits (125), Expect(5) = 2e-48
Identities = 28/61 (45%), Positives = 38/61 (62%), Gaps = 15/61 (24%)
Frame = -3
Query: 1076 KMRSKTRANTKISSKDNNEPNHLCALSFDNF-QITGDTEA--------------FSPKEE 942
K+RSKTRAN K+++KD +P H CA+ FDNF ITG++EA F P+E+
Sbjct: 164 KLRSKTRANIKVTAKDAADPTHSCAMEFDNFVVITGESEAVKRALFAVSSIMYKFGPRED 223
Query: 941 I 939
I
Sbjct: 224 I 224
Score = 41.2 bits (95), Expect(5) = 2e-48
Identities = 20/42 (47%), Positives = 30/42 (71%)
Frame = -2
Query: 621 SGACVEVDNTMGKGDEHVINVTSTEPVDNMKFMTIEAVLLLQ 496
SGA +EVD++ DE +I +T+TE ++K M +EAVLL+Q
Sbjct: 336 SGAHIEVDDSKANFDECLIIITTTESPSDLKSMAVEAVLLMQ 377
Score = 29.3 bits (64), Expect(5) = 2e-48
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -2
Query: 936 LGTYMSEAPPSIIISLDVPIH 874
L T + EAPPSIII DVP++
Sbjct: 226 LDTAVPEAPPSIIIPSDVPVY 246
>ref|XP_004134572.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 625
Score = 87.8 bits (216), Expect(5) = 8e-47
Identities = 50/93 (53%), Positives = 64/93 (68%), Gaps = 1/93 (1%)
Frame = -3
Query: 491 KINDNDDRDTVYFCLLVLPKLISCVTGNSGAIINVIRKRTKADVRFQLSKDKKSKCAHED 312
KIND D+ TV LL+ K+I C+ G SG+IIN IRK T+AD+R +SK K KCA
Sbjct: 380 KIND-DEGGTVIMRLLIPSKVIGCIIGKSGSIINEIRKSTRADIR--ISKGDKLKCASSS 436
Query: 311 DEPVEVMGEISRVRDAFIQVILRL-CDVLKDRD 216
DE VEV G++ VRDA +Q++LRL D LK+RD
Sbjct: 437 DELVEVTGKVGCVRDALVQIVLRLRDDALKERD 469
Score = 66.6 bits (161), Expect(5) = 8e-47
Identities = 37/96 (38%), Positives = 52/96 (54%), Gaps = 10/96 (10%)
Frame = -1
Query: 880 YPSAGFYSTADSILPPQSVSSLMGASHVP*LYRYLDQGSAWRVYCPGFLWCLVLVVP--- 710
Y + G Y +AD ILPP+S+ ++GA HV L+ Y + G+AW +Y + VVP
Sbjct: 245 YSAGGLYPSADPILPPRSIPPMLGAQHVQDLHDYPESGNAWPLYSSS-----LPVVPGGI 299
Query: 709 -------EFDIKLFYPHDQFGRVNAKGGSGIKSVRQ 623
E +++ P D GRV KGG IKS+RQ
Sbjct: 300 SGHPPSEELVVRVLCPFDNIGRVIGKGGGTIKSIRQ 335
Score = 46.6 bits (109), Expect(5) = 8e-47
Identities = 27/61 (44%), Positives = 33/61 (54%), Gaps = 15/61 (24%)
Frame = -3
Query: 1076 KMRSKTRANTKISSKDNNEPNHLCALSFDNFQ-ITGDTEA--------------FSPKEE 942
K+RSKTR + KIS KD +P H CA+ FDNF I G+ E F P+EE
Sbjct: 163 KLRSKTRTSIKISPKDATDPIHSCAMDFDNFAVIAGEPEGVRRALFAISSIMYKFPPREE 222
Query: 941 I 939
I
Sbjct: 223 I 223
Score = 43.5 bits (101), Expect(5) = 8e-47
Identities = 22/42 (52%), Positives = 30/42 (71%)
Frame = -2
Query: 621 SGACVEVDNTMGKGDEHVINVTSTEPVDNMKFMTIEAVLLLQ 496
SGA VEVD+T DE +I ++S E +D++K M +E VLLLQ
Sbjct: 337 SGARVEVDDTKRDCDECIITISSFESLDDLKSMAVETVLLLQ 378
Score = 31.2 bits (69), Expect(5) = 8e-47
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = -2
Query: 939 PLGTYMSEAPPSIIISLDVPIH 874
PL T ++EAPP+III DVP++
Sbjct: 224 PLDTNVNEAPPNIIIPSDVPLY 245
>ref|XP_004169687.1| PREDICTED: KH domain-containing protein At4g18375-like, partial
[Cucumis sativus]
Length = 531
Score = 87.8 bits (216), Expect(5) = 8e-47
Identities = 50/93 (53%), Positives = 64/93 (68%), Gaps = 1/93 (1%)
Frame = -3
Query: 491 KINDNDDRDTVYFCLLVLPKLISCVTGNSGAIINVIRKRTKADVRFQLSKDKKSKCAHED 312
KIND D+ TV LL+ K+I C+ G SG+IIN IRK T+AD+R +SK K KCA
Sbjct: 380 KIND-DEGGTVIMRLLIPSKVIGCIIGKSGSIINEIRKSTRADIR--ISKGDKLKCASSS 436
Query: 311 DEPVEVMGEISRVRDAFIQVILRL-CDVLKDRD 216
DE VEV G++ VRDA +Q++LRL D LK+RD
Sbjct: 437 DELVEVTGKVGCVRDALVQIVLRLRDDALKERD 469
Score = 66.6 bits (161), Expect(5) = 8e-47
Identities = 37/96 (38%), Positives = 52/96 (54%), Gaps = 10/96 (10%)
Frame = -1
Query: 880 YPSAGFYSTADSILPPQSVSSLMGASHVP*LYRYLDQGSAWRVYCPGFLWCLVLVVP--- 710
Y + G Y +AD ILPP+S+ ++GA HV L+ Y + G+AW +Y + VVP
Sbjct: 245 YSAGGLYPSADPILPPRSIPPMLGAQHVQDLHDYPESGNAWPLYSSS-----LPVVPGGI 299
Query: 709 -------EFDIKLFYPHDQFGRVNAKGGSGIKSVRQ 623
E +++ P D GRV KGG IKS+RQ
Sbjct: 300 SGHPPSEELVVRVLCPFDNIGRVIGKGGGTIKSIRQ 335
Score = 46.6 bits (109), Expect(5) = 8e-47
Identities = 27/61 (44%), Positives = 33/61 (54%), Gaps = 15/61 (24%)
Frame = -3
Query: 1076 KMRSKTRANTKISSKDNNEPNHLCALSFDNFQ-ITGDTEA--------------FSPKEE 942
K+RSKTR + KIS KD +P H CA+ FDNF I G+ E F P+EE
Sbjct: 163 KLRSKTRTSIKISPKDATDPIHSCAMDFDNFAVIAGEPEGVRRALFAISSIMYKFPPREE 222
Query: 941 I 939
I
Sbjct: 223 I 223
Score = 43.5 bits (101), Expect(5) = 8e-47
Identities = 22/42 (52%), Positives = 30/42 (71%)
Frame = -2
Query: 621 SGACVEVDNTMGKGDEHVINVTSTEPVDNMKFMTIEAVLLLQ 496
SGA VEVD+T DE +I ++S E +D++K M +E VLLLQ
Sbjct: 337 SGARVEVDDTKRDCDECIITISSFESLDDLKSMAVETVLLLQ 378
Score = 31.2 bits (69), Expect(5) = 8e-47
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = -2
Query: 939 PLGTYMSEAPPSIIISLDVPIH 874
PL T ++EAPP+III DVP++
Sbjct: 224 PLDTNVNEAPPNIIIPSDVPLY 245
>ref|XP_003593895.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|357447243|ref|XP_003593897.1| Heterogeneous nuclear
ribonucleoprotein K [Medicago truncatula]
gi|355482943|gb|AES64146.1| Heterogeneous nuclear
ribonucleoprotein K [Medicago truncatula]
gi|355482945|gb|AES64148.1| Heterogeneous nuclear
ribonucleoprotein K [Medicago truncatula]
Length = 631
Score = 92.8 bits (229), Expect(4) = 2e-40
Identities = 55/95 (57%), Positives = 68/95 (71%), Gaps = 1/95 (1%)
Frame = -3
Query: 491 KINDNDDRDTVYFCLLVLPKLISCVTGNSGAIINVIRKRTKADVRFQLSKDKKSKCAHED 312
KIND DD V LLV K+I C+ G SGAIIN IRKRTKAD+ Q+S+ K K A ++
Sbjct: 384 KINDEDDAP-VSIRLLVPSKVIGCIIGRSGAIINEIRKRTKADI--QISRSNKPKYADDN 440
Query: 311 DEPVEVMGEISRVRDAFIQVILRLC-DVLKDRDGD 210
DE VEV+GE+ VRDA IQ++LRL DVLK++D D
Sbjct: 441 DELVEVVGEVDCVRDALIQIVLRLREDVLKNKDID 475
Score = 50.1 bits (118), Expect(4) = 2e-40
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 14/60 (23%)
Frame = -3
Query: 1076 KMRSKTRANTKISSKDNNEPNHLCALSFDNFQITGDTEA--------------FSPKEEI 939
++R KTR N K+ KD +P H CA+ FDNF + G++EA FSPKE+I
Sbjct: 169 QLRVKTRTNIKVVPKDAADPEHSCAMEFDNFVLVGESEAVKRALFAVSTIMYKFSPKEDI 228
Score = 47.8 bits (112), Expect(4) = 2e-40
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Frame = -1
Query: 880 YPSAGFYSTADSILPPQSVSSLMGASHVP*LY-RYLDQGSAWRVY---CPGFLWCLVLVV 713
YP G Y +D I+ P+S L+GA+ + L+ Y D G+ W +Y P
Sbjct: 250 YPPGGLYPASDPIVQPRSFPQLIGATTMQDLHGGYADTGNTWPLYSSPLPVVSSLGASQS 309
Query: 712 PEFDIKLFYPHDQFGRVNAKGGSGIKSVRQ 623
E +++ P D+ G++ KGG IK +RQ
Sbjct: 310 EELIVRMLCPSDKIGQLIGKGGGTIKRMRQ 339
Score = 43.5 bits (101), Expect(4) = 2e-40
Identities = 20/42 (47%), Positives = 31/42 (73%)
Frame = -2
Query: 621 SGACVEVDNTMGKGDEHVINVTSTEPVDNMKFMTIEAVLLLQ 496
SGA +EVD++ + DE +I +T+TE ++K + +EAVLLLQ
Sbjct: 341 SGARIEVDDSKARHDECLITITATESTSDLKSVAVEAVLLLQ 382
>emb|CAN73780.1| hypothetical protein VITISV_042181 [Vitis vinifera]
Length = 637
Score = 100 bits (249), Expect(3) = 9e-40
Identities = 55/93 (59%), Positives = 69/93 (74%), Gaps = 1/93 (1%)
Frame = -3
Query: 491 KINDNDDRDTVYFCLLVLPKLISCVTGNSGAIINVIRKRTKADVRFQLSKDKKSKCAHED 312
KIND DD DTV LLV K+I C+ G SG+IIN IRKRT+ADVR +SK ++ KCA +
Sbjct: 379 KINDEDD-DTVAIRLLVPSKIIGCIIGKSGSIINEIRKRTRADVR--ISKSERPKCADAN 435
Query: 311 DEPVEVMGEISRVRDAFIQVILRL-CDVLKDRD 216
DE +EV+GE+ VRDA +Q++LRL D LKDRD
Sbjct: 436 DELIEVVGEVGSVRDALVQIVLRLRDDALKDRD 468
Score = 55.8 bits (133), Expect(3) = 9e-40
Identities = 55/162 (33%), Positives = 71/162 (43%), Gaps = 14/162 (8%)
Frame = -2
Query: 939 PLGTYMSEAPPSIIISLDVPIH-------------LLVSIPLQIQFFHLNLCLH*WVLHM 799
PL T + EAPPSIII DVPI+ S+P + H+ L
Sbjct: 225 PLDTTVPEAPPSIIIPSDVPIYPAGGFYPSADSIVSARSVPPVLAATHVP------ELQG 278
Query: 798 YLNFTDTWTRVVHGVYIVRVSFGVWCWWFRNLI*NCFTLMTSLDVSMQKEVVESK-VLGR 622
Y + TW + +V G LI + + + K V
Sbjct: 279 YSDMGSTWPVYSSNLPVVS---GYGASRSEELIIRVLCPFDKIGRVIGRGGSSIKSVREA 335
Query: 621 SGACVEVDNTMGKGDEHVINVTSTEPVDNMKFMTIEAVLLLQ 496
SGA VEVD+T DE +I VTSTE VD++K M +EAVLLLQ
Sbjct: 336 SGAHVEVDDTKADRDECLITVTSTESVDDLKSMAVEAVLLLQ 377
Score = 55.5 bits (132), Expect(3) = 9e-40
Identities = 29/61 (47%), Positives = 40/61 (65%), Gaps = 15/61 (24%)
Frame = -3
Query: 1076 KMRSKTRANTKISSKDNNEPNHLCALSFDNF-QITGDTEA--------------FSPKEE 942
++RSKTRAN KI++KD+ +P+H CA+ FDNF I GD+EA F+P+EE
Sbjct: 164 RLRSKTRANIKITAKDSTDPSHSCAMEFDNFVLIAGDSEAVKKALFAISAIMYKFTPREE 223
Query: 941 I 939
I
Sbjct: 224 I 224
Score = 68.9 bits (167), Expect = 2e-09
Identities = 39/89 (43%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Frame = -1
Query: 880 YPSAGFYSTADSILPPQSVSSLMGASHVP*LYRYLDQGSAWRVY---CPGFLWCLVLVVP 710
YP+ GFY +ADSI+ +SV ++ A+HVP L Y D GS W VY P
Sbjct: 246 YPAGGFYPSADSIVSARSVPPVLAATHVPELQGYSDMGSTWPVYSSNLPVVSGYGASRSE 305
Query: 709 EFDIKLFYPHDQFGRVNAKGGSGIKSVRQ 623
E I++ P D+ GRV +GGS IKSVR+
Sbjct: 306 ELIIRVLCPFDKIGRVIGRGGSSIKSVRE 334