BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00014634
         (819 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK41303.1| unknown [Medicago truncatula]                          216   6e-54
ref|XP_003610652.1| DNA-directed RNA polymerases I, II, and III ...   215   1e-53
ref|XP_002885498.1| ATRPABC24.3 [Arabidopsis lyrata subsp. lyrat...   213   3e-53
ref|NP_188871.1| DNA-directed RNA polymerase II subunit E [Arabi...   212   7e-53
gb|AFK38034.1| unknown [Lotus japonicus]                              212   9e-53

>gb|AFK41303.1| unknown [Medicago truncatula]
          Length = 206

 Score =  216 bits (549), Expect = 6e-54
 Identities = 107/204 (52%), Positives = 144/204 (70%)
 Frame = -3

Query: 625 MFDEEEVTRLFKIYRTVMEMLXXXXXXXXXXXVNISRSEFVKKMGDTFKREDLTILKTRQ 446
           +F EEE+TRL++I +TVM+ML           +N+S+ +F  K G+  KREDL I KT++
Sbjct: 2   VFSEEEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKDKYGENMKREDLVINKTKK 61

Query: 445 NNESEQIFVFFPDDLKIGVKNLRTYLDRMKADNVRRAILVARNPLTPSAKVAVREIASKX 266
           +  S+QI+VFFP++ K+GVK ++TY +RM ++NV RAILV +  LTP AK  V EIASK 
Sbjct: 62  DKPSDQIYVFFPEEAKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFAKTCVSEIASKF 121

Query: 265 XXXXXXXXXXXVNIKNHIHVPEHQVLTPEEKKALLAQYNLKDAQLPRMKIIDPIARYYGL 86
                      VNIK H+ VPEHQ+L   EKK LL +Y +K+ QLPR+++ DP+ARYYGL
Sbjct: 122 HLEVFQEAELLVNIKEHVLVPEHQILNDTEKKTLLERYTVKETQLPRIQVTDPVARYYGL 181

Query: 85  RVGQIVKIIRCEETAGRYVTYRIV 14
           + GQ+VKIIR  ETAGRYVTYR+V
Sbjct: 182 KRGQVVKIIRPSETAGRYVTYRLV 205


>ref|XP_003610652.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1
           [Medicago truncatula] gi|355511987|gb|AES93610.1|
           DNA-directed RNA polymerases I, II, and III subunit
           RPABC1 [Medicago truncatula]
          Length = 410

 Score =  215 bits (547), Expect = 1e-53
 Identities = 107/204 (52%), Positives = 143/204 (70%)
 Frame = -3

Query: 625 MFDEEEVTRLFKIYRTVMEMLXXXXXXXXXXXVNISRSEFVKKMGDTFKREDLTILKTRQ 446
           +F EEE+TRL++I +TVM+ML           +N+S+ +F  K G+  KREDL I KT++
Sbjct: 206 VFSEEEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKDKYGENMKREDLVINKTKK 265

Query: 445 NNESEQIFVFFPDDLKIGVKNLRTYLDRMKADNVRRAILVARNPLTPSAKVAVREIASKX 266
           +  S+QI+VFFP++ K+GVK ++TY +RM ++NV RAILV +  LTP AK  V EIASK 
Sbjct: 266 DKPSDQIYVFFPEEAKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFAKTCVSEIASKF 325

Query: 265 XXXXXXXXXXXVNIKNHIHVPEHQVLTPEEKKALLAQYNLKDAQLPRMKIIDPIARYYGL 86
                      VNIK H+ VPEHQ+L   EKK LL +Y +K+ QLPR+++ DP+ARYYGL
Sbjct: 326 HLEVFQEAELLVNIKEHVLVPEHQILNDTEKKTLLERYTVKETQLPRIQVTDPVARYYGL 385

Query: 85  RVGQIVKIIRCEETAGRYVTYRIV 14
           + GQ+VKIIR  ETAGRYVTYR V
Sbjct: 386 KRGQVVKIIRPSETAGRYVTYRFV 409


>ref|XP_002885498.1| ATRPABC24.3 [Arabidopsis lyrata subsp. lyrata]
           gi|297331338|gb|EFH61757.1| ATRPABC24.3 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 205

 Score =  213 bits (543), Expect = 3e-53
 Identities = 103/204 (50%), Positives = 144/204 (70%)
 Frame = -3

Query: 625 MFDEEEVTRLFKIYRTVMEMLXXXXXXXXXXXVNISRSEFVKKMGDTFKREDLTILKTRQ 446
           M  EEE+ RL++I +T+M+ML           + +++ +F++K GD  KREDL  LK ++
Sbjct: 1   MLTEEEIKRLYRIQKTLMQMLKDRGYFIADSELTMTKQQFIRKHGDNMKREDLVTLKVKR 60

Query: 445 NNESEQIFVFFPDDLKIGVKNLRTYLDRMKADNVRRAILVARNPLTPSAKVAVREIASKX 266
           N+ S+Q+++FFPD+ K+GVK ++ Y +RMK++NV RAILV +  LTP A+  + EI+SK 
Sbjct: 61  NDNSDQLYIFFPDEAKVGVKTMKMYTNRMKSENVYRAILVVQQNLTPFARTCISEISSKF 120

Query: 265 XXXXXXXXXXXVNIKNHIHVPEHQVLTPEEKKALLAQYNLKDAQLPRMKIIDPIARYYGL 86
                      VNIK H+ VPEHQVLT EEKK LL +Y +K+ QLPR+++ DPIARY+GL
Sbjct: 121 HLEVFQEAEMLVNIKEHVLVPEHQVLTTEEKKTLLERYTVKETQLPRIQVTDPIARYFGL 180

Query: 85  RVGQIVKIIRCEETAGRYVTYRIV 14
           + GQ+VKIIR  ETAGRYVTYR V
Sbjct: 181 KRGQVVKIIRPSETAGRYVTYRYV 204


>ref|NP_188871.1| DNA-directed RNA polymerase II subunit E [Arabidopsis thaliana]
           gi|13899113|gb|AAK48978.1|AF370551_1 RNA polymerase I,
           II and III 24.3 kDa subunit [Arabidopsis thaliana]
           gi|15724322|gb|AAL06554.1|AF412101_1 AT3g22320/MCB17_5
           [Arabidopsis thaliana] gi|3372233|gb|AAC28253.1| RNA
           polymerase I, II and III 24.3 kDa subunit [Arabidopsis
           thaliana] gi|9293866|dbj|BAB01769.1| RNA polymerase I,
           II and III 24.3 kDa subunit [Arabidopsis thaliana]
           gi|21554280|gb|AAM63355.1| RNA polymerase I, II and III
           24.3 kDa subunit [Arabidopsis thaliana]
           gi|25083949|gb|AAN72141.1| RNA polymerase I, II and III
           24.3 kDa subunit [Arabidopsis thaliana]
           gi|332643100|gb|AEE76621.1| DNA-directed RNA polymerase
           II subunit E [Arabidopsis thaliana]
          Length = 205

 Score =  212 bits (540), Expect = 7e-53
 Identities = 103/204 (50%), Positives = 144/204 (70%)
 Frame = -3

Query: 625 MFDEEEVTRLFKIYRTVMEMLXXXXXXXXXXXVNISRSEFVKKMGDTFKREDLTILKTRQ 446
           M  EEE+ RL++I +T+M+ML           + +++ +F++K GD  KREDL  LK ++
Sbjct: 1   MLTEEELKRLYRIQKTLMQMLRDRGYFIADSELTMTKQQFIRKHGDNMKREDLVTLKAKR 60

Query: 445 NNESEQIFVFFPDDLKIGVKNLRTYLDRMKADNVRRAILVARNPLTPSAKVAVREIASKX 266
           N+ S+Q+++FFPD+ K+GVK ++ Y +RMK++NV RAILV +  LTP A+  + EI+SK 
Sbjct: 61  NDNSDQLYIFFPDEAKVGVKTMKMYTNRMKSENVFRAILVVQQNLTPFARTCISEISSKF 120

Query: 265 XXXXXXXXXXXVNIKNHIHVPEHQVLTPEEKKALLAQYNLKDAQLPRMKIIDPIARYYGL 86
                      VNIK H+ VPEHQVLT EEKK LL +Y +K+ QLPR+++ DPIARY+GL
Sbjct: 121 HLEVFQEAEMLVNIKEHVLVPEHQVLTTEEKKTLLERYTVKETQLPRIQVTDPIARYFGL 180

Query: 85  RVGQIVKIIRCEETAGRYVTYRIV 14
           + GQ+VKIIR  ETAGRYVTYR V
Sbjct: 181 KRGQVVKIIRPSETAGRYVTYRYV 204


>gb|AFK38034.1| unknown [Lotus japonicus]
          Length = 206

 Score =  212 bits (539), Expect = 9e-53
 Identities = 106/201 (52%), Positives = 142/201 (70%)
 Frame = -3

Query: 616 EEEVTRLFKIYRTVMEMLXXXXXXXXXXXVNISRSEFVKKMGDTFKREDLTILKTRQNNE 437
           EE++T+L +I +TVM+ML           +N+SR EF  K GD  KREDLTI KT+++  
Sbjct: 5   EEDITKLHRIRKTVMQMLRDRNYLVGDFEINMSRHEFKTKYGDNMKREDLTINKTKKDGP 64

Query: 436 SEQIFVFFPDDLKIGVKNLRTYLDRMKADNVRRAILVARNPLTPSAKVAVREIASKXXXX 257
           S+QI+VFFPD+ K+GVK ++TY +RM ++NV RAILV ++ LTP AK  + E++SK    
Sbjct: 65  SDQIYVFFPDEPKVGVKTMKTYTNRMNSENVFRAILVCQSNLTPFAKTCISEMSSKFQLE 124

Query: 256 XXXXXXXXVNIKNHIHVPEHQVLTPEEKKALLAQYNLKDAQLPRMKIIDPIARYYGLRVG 77
                   VNIK H+ VPEHQ+L   EKK LL +Y +K+ QLPR++I DP+ARYYGL+ G
Sbjct: 125 VFQEAELLVNIKEHVLVPEHQILNETEKKTLLERYTVKETQLPRIQITDPVARYYGLKRG 184

Query: 76  QIVKIIRCEETAGRYVTYRIV 14
           Q+VKIIR  ETAGRY+TYR V
Sbjct: 185 QVVKIIRPSETAGRYITYRFV 205