BLASTX nr result

ID: Aconitum21_contig00014475 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00014475
         (814 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527654.1| RNA binding protein, putative [Ricinus commu...    85   2e-14
ref|XP_003533438.1| PREDICTED: nucleolar protein 12-like [Glycin...    83   8e-14
ref|NP_199496.1| RNA recognition motif-containing protein [Arabi...    82   1e-13
ref|XP_002865157.1| RNA recognition motif-containing protein [Ar...    82   1e-13
emb|CBI33864.3| unnamed protein product [Vitis vinifera]               82   1e-13

>ref|XP_002527654.1| RNA binding protein, putative [Ricinus communis]
           gi|223532959|gb|EEF34725.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 830

 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 41/69 (59%), Positives = 51/69 (73%)
 Frame = -1

Query: 811 GEGFDDEDKLLRSIFVGNXXXXXXXXXXLAEFSKFGEVDSVRIRSVPIVDSKTPRKGAIM 632
           GEGFDDE KLLR++FVGN          + EFS+FGE+DSVRIRSVPIVD+K PRKGA++
Sbjct: 152 GEGFDDESKLLRTVFVGNLPLKMKKKTLVKEFSQFGEIDSVRIRSVPIVDTKIPRKGAVI 211

Query: 631 KGRIKEYVD 605
             +I +  D
Sbjct: 212 LKKINDSAD 220


>ref|XP_003533438.1| PREDICTED: nucleolar protein 12-like [Glycine max]
          Length = 519

 Score = 82.8 bits (203), Expect = 8e-14
 Identities = 42/68 (61%), Positives = 49/68 (72%)
 Frame = -1

Query: 808 EGFDDEDKLLRSIFVGNXXXXXXXXXXLAEFSKFGEVDSVRIRSVPIVDSKTPRKGAIMK 629
           EGFDDEDKLLR++FVGN          L EF KFGEV+SVRIRSVPI D+K PRKGAI+ 
Sbjct: 183 EGFDDEDKLLRTVFVGNLPLKVKKKTLLKEFKKFGEVESVRIRSVPIQDTKKPRKGAILA 242

Query: 628 GRIKEYVD 605
            +I +  D
Sbjct: 243 KKINDAAD 250


>ref|NP_199496.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
           gi|8809667|dbj|BAA97218.1| unnamed protein product
           [Arabidopsis thaliana] gi|32441262|gb|AAP81806.1|
           At5g46840 [Arabidopsis thaliana]
           gi|110736326|dbj|BAF00133.1| hypothetical protein
           [Arabidopsis thaliana] gi|332008049|gb|AED95432.1| RNA
           recognition motif-containing protein [Arabidopsis
           thaliana]
          Length = 501

 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 44/65 (67%), Positives = 48/65 (73%)
 Frame = -1

Query: 808 EGFDDEDKLLRSIFVGNXXXXXXXXXXLAEFSKFGEVDSVRIRSVPIVDSKTPRKGAIMK 629
           EGFDDE KLLR++FVGN          L EFSKFGEV+SVRIRSVPIVDSK  RKGAIM 
Sbjct: 161 EGFDDESKLLRTVFVGNLPLKVKKKVILKEFSKFGEVESVRIRSVPIVDSKRTRKGAIML 220

Query: 628 GRIKE 614
            +I E
Sbjct: 221 KQINE 225


>ref|XP_002865157.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
           lyrata] gi|297310992|gb|EFH41416.1| RNA recognition
           motif-containing protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 509

 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 44/65 (67%), Positives = 48/65 (73%)
 Frame = -1

Query: 808 EGFDDEDKLLRSIFVGNXXXXXXXXXXLAEFSKFGEVDSVRIRSVPIVDSKTPRKGAIMK 629
           EGFDDE KLLR++FVGN          L EFSKFGEV+SVRIRSVPIVDSK  RKGAIM 
Sbjct: 167 EGFDDESKLLRTVFVGNLPLKVKKKVILKEFSKFGEVESVRIRSVPIVDSKRTRKGAIML 226

Query: 628 GRIKE 614
            +I E
Sbjct: 227 KQINE 231


>emb|CBI33864.3| unnamed protein product [Vitis vinifera]
          Length = 421

 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 43/68 (63%), Positives = 49/68 (72%)
 Frame = -1

Query: 808 EGFDDEDKLLRSIFVGNXXXXXXXXXXLAEFSKFGEVDSVRIRSVPIVDSKTPRKGAIMK 629
           EGFDDE KLLR++FVGN          L EFS FGEV SVRIRSVPI+DSK PRKGAI+ 
Sbjct: 130 EGFDDESKLLRTVFVGNLPLKIKKKALLKEFSVFGEVQSVRIRSVPILDSKKPRKGAIIS 189

Query: 628 GRIKEYVD 605
            +I + VD
Sbjct: 190 KKINDSVD 197


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