BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00014436
         (1906 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001765745.1| predicted protein [Physcomitrella patens sub...   592   e-167
ref|XP_002327819.1| predicted protein [Populus trichocarpa] gi|2...   578   e-162
ref|XP_001763056.1| predicted protein [Physcomitrella patens sub...   575   e-161
ref|XP_002888120.1| hypothetical protein ARALYDRAFT_475241 [Arab...   574   e-161
sp|Q9ZR40.1|U2A2B_NICPL RecName: Full=Splicing factor U2af large...   569   e-160

>ref|XP_001765745.1| predicted protein [Physcomitrella patens subsp. patens]
            gi|162682922|gb|EDQ69336.1| predicted protein
            [Physcomitrella patens subsp. patens]
          Length = 491

 Score =  592 bits (1527), Expect = e-167
 Identities = 297/412 (72%), Positives = 343/412 (83%), Gaps = 1/412 (0%)
 Frame = +3

Query: 459  SGFDMAPPGTPLAPGASIPGQLQGLTQPMPGMFPSMFSFG-TTQLGALPLMPAQAMTQQA 635
            SGFDMAPPG  +  GA++PGQL G+ QPMPG+FP MF FG T Q G +P MPAQAMTQQA
Sbjct: 95   SGFDMAPPGAAVIAGAAVPGQLPGMAQPMPGVFPGMFPFGGTQQFGGIPGMPAQAMTQQA 154

Query: 636  TRHARRVYVGGLPPMANEQTIATFFSRVMAAIGGNSAGAGDAVVNVYINHEKKFAFVEMR 815
            TRHARRVYVGGLPPMANEQTIAT+FS+VMAA+GGN+AG GDAVVNVYIN EKKFAFVEMR
Sbjct: 155  TRHARRVYVGGLPPMANEQTIATYFSQVMAAVGGNTAGPGDAVVNVYINQEKKFAFVEMR 214

Query: 816  SVEEASNAMALDGIIFEGVSVRVRRPTDYNPSLAAALGPSQPSPCLNLAAVGLTPGAIGG 995
            +VEEASNAMALDGI+FEGVSVRVRRP+DYNPS+AA LGPSQPSP LNLAAVGLTPGA GG
Sbjct: 215  TVEEASNAMALDGIMFEGVSVRVRRPSDYNPSMAATLGPSQPSPHLNLAAVGLTPGAAGG 274

Query: 996  VEGPDRIFVGGLPYYFSEVQIRELLESFGALRGFDLVKDRDTGNSKGYGFCVYQDPAVTD 1175
             +GPDRIFVGGLPYY +E+QI+ELLESFG LRGFDLVKDRDTGNSKGYGFCVYQDPAVTD
Sbjct: 275  ADGPDRIFVGGLPYYLTEIQIKELLESFGPLRGFDLVKDRDTGNSKGYGFCVYQDPAVTD 334

Query: 1176 IACAALNGLKMGDKTLTVRRATASSGQTKDQETILQQAQQHIAMQKMVLQASGANFPGVG 1355
            +A AALNGLKMGDKTL+VRRA+AS     DQ  +L  AQQ IA+Q   +           
Sbjct: 335  VAIAALNGLKMGDKTLSVRRASASGQPKPDQANVLAHAQQQIAIQVFWM----------- 383

Query: 1356 MVNSTLEVPTKVVCLTEVVAADELRNEEEYNDILEDMREEGGKFGSLVNVVIPRPNANEE 1535
               S LE  TKVV LT+VV+ DEL+++EEY DILEDM+EE GK+G+L+ VVIPRP   E+
Sbjct: 384  ---SPLETSTKVVALTQVVSPDELKDDEEYQDILEDMKEECGKYGNLLRVVIPRPRDGED 440

Query: 1536 QTPGIGKVFLEYSDTLGSARAKAALHGRKFGNNEVVAVFYSEDQYFNSDFGG 1691
              PG+GKVF+EYSDT G+A+AKA+LHGR+FG + VVAV+Y E+++   D+GG
Sbjct: 441  -VPGVGKVFVEYSDTAGAAKAKASLHGRRFGGHSVVAVYYPEEKFAAGDYGG 491


>ref|XP_002327819.1| predicted protein [Populus trichocarpa] gi|222836904|gb|EEE75297.1|
            predicted protein [Populus trichocarpa]
          Length = 541

 Score =  578 bits (1491), Expect = e-162
 Identities = 293/423 (69%), Positives = 340/423 (80%), Gaps = 14/423 (3%)
 Frame = +3

Query: 459  SGFDMAPPGTPLAPGASIP------------GQLQGLTQPMPGMFPSMFSFGTTQ-LGAL 599
            SGFDMAPP + + P A+              GQ+ G T P+PGMFP+MF  GT+Q  GAL
Sbjct: 127  SGFDMAPPSSAILPNAAAAAAAAAAASAAASGQIAGTTPPIPGMFPNMFPLGTSQQFGAL 186

Query: 600  PLMPAQAMTQQATRHARRVYVGGLPPMANEQTIATFFSRVMAAIGGNSAGAGDAVVNVYI 779
            P+MP QAMTQQATRHARRVYVGGLPP ANEQ++ATFFS+VMAAIGGN+AG GDAVVNVYI
Sbjct: 187  PVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYI 246

Query: 780  NHEKKFAFVEMRSVEEASNAMALDGIIFEGVSVRVRRPTDYNPSLAAALGPSQPSPCLNL 959
            NHEKKFAFVEMRSVEEASNAMALDGIIFEG  V+VRRP+DYNPSLAA LGPSQP+P LNL
Sbjct: 247  NHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNL 306

Query: 960  AAVGLTPGAIGGVEGPDRIFVGGLPYYFSEVQIRELLESFGALRGFDLVKDRDTGNSKGY 1139
            +AVGL PG+ GG+EGPDRIFVGGLPYYF+E QIRELLESFG LRGFDLVKDR+TGNSKGY
Sbjct: 307  SAVGLAPGSAGGLEGPDRIFVGGLPYYFTESQIRELLESFGPLRGFDLVKDRETGNSKGY 366

Query: 1140 GFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQTK-DQETILQQAQQHIAMQKM 1316
             FCVYQD +VTDIACAALNG+KMGDKTLTVRRA   + Q K +QE +L  AQQ IA+Q++
Sbjct: 367  AFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGTNQPKPEQENVLLHAQQQIALQRL 426

Query: 1317 VLQASGANFPGVGMVNSTLEVPTKVVCLTEVVAADELRNEEEYNDILEDMREEGGKFGSL 1496
            +LQ      P          VPTKVVCLT+VV  DEL++++EY DILEDMR E GKFG L
Sbjct: 427  MLQPQPQQQP----------VPTKVVCLTQVVTGDELKDDDEYEDILEDMRTEAGKFGLL 476

Query: 1497 VNVVIPRPNANEEQTPGIGKVFLEYSDTLGSARAKAALHGRKFGNNEVVAVFYSEDQYFN 1676
            VNVVIPRP  N E  PG+GKVFLEY+DT GS++A+A ++GRKF  N+VVAVFY E+++  
Sbjct: 477  VNVVIPRPRPNGENAPGVGKVFLEYADTEGSSKARAGMNGRKFDGNQVVAVFYPENKFSQ 536

Query: 1677 SDF 1685
             ++
Sbjct: 537  GEY 539


>ref|XP_001763056.1| predicted protein [Physcomitrella patens subsp. patens]
            gi|162685868|gb|EDQ72261.1| predicted protein
            [Physcomitrella patens subsp. patens]
          Length = 503

 Score =  575 bits (1481), Expect = e-161
 Identities = 290/414 (70%), Positives = 340/414 (82%), Gaps = 3/414 (0%)
 Frame = +3

Query: 459  SGFDMAPPGTPLAPGASIPGQLQGLTQPMPGMFPSMFSFG-TTQLGALPLMPAQAMTQQA 635
            SGFDMAPPG  +  GA++ GQ+ G+ QPMPG++P MF FG T Q G +P MPAQAMTQQA
Sbjct: 102  SGFDMAPPGAAVVSGAALAGQIPGIAQPMPGVYPGMFPFGGTQQFGGIPGMPAQAMTQQA 161

Query: 636  TRHARRVYVGGLPPMANEQTIATFFSRVMAAIGGNSAGAGDAVVNVYINHEKKFAFVEMR 815
            TRHARRVYVGGLPP+ANEQTIAT+FS+VMAA+GGN+AG GDAVVNVYIN EKKFAFVEMR
Sbjct: 162  TRHARRVYVGGLPPLANEQTIATYFSQVMAAVGGNTAGPGDAVVNVYINQEKKFAFVEMR 221

Query: 816  SVEEASNAMALDGIIFEGVSVRVRRPTDYNPSLAAALGPSQPSPCLNLAAVGLTPG-AIG 992
            +VEEASNAMALDGI+FEGVSVRVRRP+DYNPS+AA LGPSQPSP LNLAAVGLTPG A G
Sbjct: 222  TVEEASNAMALDGIMFEGVSVRVRRPSDYNPSMAATLGPSQPSPHLNLAAVGLTPGNAAG 281

Query: 993  GVEGPDRIFVGGLPYYFSEVQIRELLESFGALRGFDLVKDRDTGNSKGYGFCVYQDPAVT 1172
            G +GPDRIFVGGLPYY +E+QI+ELLESFG LRGFDLVKDRDTGNSKGYGFCVYQDP+V 
Sbjct: 282  GADGPDRIFVGGLPYYLTEIQIKELLESFGPLRGFDLVKDRDTGNSKGYGFCVYQDPSVV 341

Query: 1173 DIACAALNGLKMGDKTLTVRRATASSGQTK-DQETILQQAQQHIAMQKMVLQASGANFPG 1349
            DIACA LNG+KM DKTL VRRATA   + K DQ  +L  AQQ IA+Q +V          
Sbjct: 342  DIACATLNGMKMDDKTLNVRRATARLARPKPDQANVLAHAQQQIAIQVLVYSWM------ 395

Query: 1350 VGMVNSTLEVPTKVVCLTEVVAADELRNEEEYNDILEDMREEGGKFGSLVNVVIPRPNAN 1529
                 S +E PT VV LT+VV+ DEL+++EEY DILEDM+EE GK+G+LV +VIPRP   
Sbjct: 396  -----SPVETPTNVVALTQVVSPDELKDDEEYQDILEDMKEECGKYGNLVKLVIPRPRDG 450

Query: 1530 EEQTPGIGKVFLEYSDTLGSARAKAALHGRKFGNNEVVAVFYSEDQYFNSDFGG 1691
            E+  PG+GKVF+EYSDT G+A+AKA+LHGR+FG + VVAV+Y  +++   D+GG
Sbjct: 451  ED-VPGVGKVFVEYSDTAGAAKAKASLHGRRFGGHSVVAVYYPAEKFSIEDYGG 503


>ref|XP_002888120.1| hypothetical protein ARALYDRAFT_475241 [Arabidopsis lyrata subsp.
            lyrata] gi|297333961|gb|EFH64379.1| hypothetical protein
            ARALYDRAFT_475241 [Arabidopsis lyrata subsp. lyrata]
          Length = 589

 Score =  574 bits (1479), Expect = e-161
 Identities = 290/413 (70%), Positives = 340/413 (82%), Gaps = 4/413 (0%)
 Frame = +3

Query: 459  SGFDMAPPGTPLAPGASIPGQLQGL--TQPMPGMFPSMFSFGT-TQLGALPLMPAQAMTQ 629
            SGFDMAPP    A   +  GQ+  +  T  +PGMFP+MF      QLGALP++P QAMTQ
Sbjct: 189  SGFDMAPPDMLAATAVAAAGQVPSVPTTATIPGMFPNMFPMVPGQQLGALPVLPVQAMTQ 248

Query: 630  QATRHARRVYVGGLPPMANEQTIATFFSRVMAAIGGNSAGAGDAVVNVYINHEKKFAFVE 809
            QATRHARRVYVGGLPP ANEQ++ATFFS+VM+AIGGN+AG GDAVVNVYINHEKKFAFVE
Sbjct: 249  QATRHARRVYVGGLPPTANEQSVATFFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVE 308

Query: 810  MRSVEEASNAMALDGIIFEGVSVRVRRPTDYNPSLAAALGPSQPSPCLNLAAVGLTPGAI 989
            MRSVEEASNAMALDGII EGV V+VRRPTDYNPSLAA LGPSQP+P LNLAAVGL+ G+ 
Sbjct: 309  MRSVEEASNAMALDGIILEGVPVKVRRPTDYNPSLAATLGPSQPNPNLNLAAVGLSSGST 368

Query: 990  GGVEGPDRIFVGGLPYYFSEVQIRELLESFGALRGFDLVKDRDTGNSKGYGFCVYQDPAV 1169
            GG+EGPDRIFVGGLPYYF+EVQIRELLESFG LRGF+LVKDR+TGNSKGY FCVYQDP+V
Sbjct: 369  GGLEGPDRIFVGGLPYYFTEVQIRELLESFGPLRGFNLVKDRETGNSKGYAFCVYQDPSV 428

Query: 1170 TDIACAALNGLKMGDKTLTVRRATASSGQTK-DQETILQQAQQHIAMQKMVLQASGANFP 1346
            TDIACAALNG+KMGDKTLTVRRA     Q K +QE +L  AQQ IA+Q+++LQ  G    
Sbjct: 429  TDIACAALNGIKMGDKTLTVRRAIQGVIQPKPEQEEVLLHAQQQIALQRLMLQPGG---- 484

Query: 1347 GVGMVNSTLEVPTKVVCLTEVVAADELRNEEEYNDILEDMREEGGKFGSLVNVVIPRPNA 1526
                       PTK+VCLT+VV AD+LR++EEY DI+EDMR+EGGKFG+LVNVVIPRPN 
Sbjct: 485  ----------TPTKIVCLTQVVTADDLRDDEEYADIMEDMRQEGGKFGNLVNVVIPRPNP 534

Query: 1527 NEEQTPGIGKVFLEYSDTLGSARAKAALHGRKFGNNEVVAVFYSEDQYFNSDF 1685
            + + TPG+GKVFLEY+D  GS++A++ ++GRKFG N+VVAV+Y ED+Y   D+
Sbjct: 535  DHDPTPGVGKVFLEYADVDGSSKARSGMNGRKFGGNQVVAVYYPEDKYLQGDY 587


>sp|Q9ZR40.1|U2A2B_NICPL RecName: Full=Splicing factor U2af large subunit B; AltName:
            Full=NpU2AF65b; AltName: Full=U2 auxiliary factor 65 kDa
            subunit B; AltName: Full=U2 small nuclear
            ribonucleoprotein auxiliary factor large subunit B;
            Short=U2 snRNP auxiliary factor large subunit B
            gi|3850821|emb|CAA77135.1| U2 snRNP auxiliary factor,
            large subunit [Nicotiana plumbaginifolia]
          Length = 573

 Score =  569 bits (1467), Expect = e-160
 Identities = 286/413 (69%), Positives = 339/413 (82%), Gaps = 2/413 (0%)
 Frame = +3

Query: 459  SGFDMAPPGTPLAPG-ASIPGQLQGLTQPMPGMFPSMFSFGTTQLGALPLMPAQAMTQQA 635
            SGFDMAPP + + PG  +  GQ+ G   P+PGMFP+MF   + Q GALP+MP QAMTQQA
Sbjct: 175  SGFDMAPPTSAMLPGITAAAGQVPGTNPPIPGMFPNMFPLASGQFGALPVMPIQAMTQQA 234

Query: 636  TRHARRVYVGGLPPMANEQTIATFFSRVMAAIGGNSAGAGDAVVNVYINHEKKFAFVEMR 815
            TRHARRVYVGGLP  ANEQ++ATFFS VM+AIGGN+AG GDAVVNVYIN+EKKFAFVEMR
Sbjct: 235  TRHARRVYVGGLPAHANEQSVATFFSHVMSAIGGNTAGPGDAVVNVYINYEKKFAFVEMR 294

Query: 816  SVEEASNAMALDGIIFEGVSVRVRRPTDYNPSLAAALGPSQPSPCLNLAAVGLTPGAIGG 995
            SVEEASNAMALDGIIFEG   +VRRP+DYNPSLAA LGPSQP+P LNLAAVGL+PG+ GG
Sbjct: 295  SVEEASNAMALDGIIFEGAPCKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLSPGSAGG 354

Query: 996  VEGPDRIFVGGLPYYFSEVQIRELLESFGALRGFDLVKDRDTGNSKGYGFCVYQDPAVTD 1175
            +EGPDRIFVGGLPYYF+E QIRELLESFG LRGFDLVKDR+TGNSKGY FCVYQD +VTD
Sbjct: 355  LEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDVSVTD 414

Query: 1176 IACAALNGLKMGDKTLTVRRATASSGQTK-DQETILQQAQQHIAMQKMVLQASGANFPGV 1352
            IACAALNG+KMGDKTLTVRRA   + Q K +QE++L  AQQ IA+Q+++LQ +       
Sbjct: 415  IACAALNGIKMGDKTLTVRRANQGTTQPKPEQESVLLHAQQQIALQRLMLQPA------- 467

Query: 1353 GMVNSTLEVPTKVVCLTEVVAADELRNEEEYNDILEDMREEGGKFGSLVNVVIPRPNANE 1532
                    + TKV+ LTEV++ADEL ++E+Y DILEDMR E GKFGSLVNVVIPRP+ N 
Sbjct: 468  -------TLATKVLSLTEVISADELNDDEDYQDILEDMRTECGKFGSLVNVVIPRPSPNG 520

Query: 1533 EQTPGIGKVFLEYSDTLGSARAKAALHGRKFGNNEVVAVFYSEDQYFNSDFGG 1691
            E TPG+GKVFLEY+D   S++A+ +L+GRKFG N+VVAVFY E++++  D+ G
Sbjct: 521  EPTPGVGKVFLEYADVDSSSKARQSLNGRKFGGNQVVAVFYPENKFYEGDYDG 573