BLASTX nr result

ID: Aconitum21_contig00014332 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00014332
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513667.1| fibrillarin, putative [Ricinus communis] gi|...   244   7e-63
ref|XP_002318803.1| predicted protein [Populus trichocarpa] gi|2...   243   9e-63
ref|XP_002321930.1| predicted protein [Populus trichocarpa] gi|2...   242   2e-62
ref|NP_568772.3| rRNA 2'-O-methyltransferase fibrillarin 1 [Arab...   242   3e-62
ref|NP_567724.1| rRNA 2'-O-methyltransferase fibrillarin 2 [Arab...   242   3e-62

>ref|XP_002513667.1| fibrillarin, putative [Ricinus communis]
           gi|223547575|gb|EEF49070.1| fibrillarin, putative
           [Ricinus communis]
          Length = 247

 Score =  244 bits (622), Expect = 7e-63
 Identities = 118/126 (93%), Positives = 124/126 (98%)
 Frame = +1

Query: 1   DGTKIEYRVWNPFRSKLASAILGGLDNVWIVPGAKVLYLGAASGTTVSHVSDIIGPEGVV 180
           DGTK+EYRVWNPFRSKLA+AILGG+DN+WI PGAKVLYLGAASGTTVSHVSDI+GP GVV
Sbjct: 51  DGTKVEYRVWNPFRSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDIVGPTGVV 110

Query: 181 YAVEFSHRSGRDLVNMAKKRTNIIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILA 360
           YAVEFSHRSGRDLVNMAKKRTN+IPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILA
Sbjct: 111 YAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILA 170

Query: 361 LNASYF 378
           LNASYF
Sbjct: 171 LNASYF 176


>ref|XP_002318803.1| predicted protein [Populus trichocarpa] gi|222859476|gb|EEE97023.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score =  243 bits (621), Expect = 9e-63
 Identities = 119/126 (94%), Positives = 124/126 (98%)
 Frame = +1

Query: 1   DGTKIEYRVWNPFRSKLASAILGGLDNVWIVPGAKVLYLGAASGTTVSHVSDIIGPEGVV 180
           DGTK+EYRVWNPFRSKLASAILGG+D+VWI PGAKVLYLGAASGTTVSHVSDI+GP GVV
Sbjct: 50  DGTKVEYRVWNPFRSKLASAILGGVDDVWIKPGAKVLYLGAASGTTVSHVSDIVGPTGVV 109

Query: 181 YAVEFSHRSGRDLVNMAKKRTNIIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILA 360
           YAVEFSHRSGRDLVNMAKKRTN+IPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILA
Sbjct: 110 YAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILA 169

Query: 361 LNASYF 378
           LNASYF
Sbjct: 170 LNASYF 175


>ref|XP_002321930.1| predicted protein [Populus trichocarpa] gi|222868926|gb|EEF06057.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score =  242 bits (618), Expect = 2e-62
 Identities = 118/126 (93%), Positives = 124/126 (98%)
 Frame = +1

Query: 1   DGTKIEYRVWNPFRSKLASAILGGLDNVWIVPGAKVLYLGAASGTTVSHVSDIIGPEGVV 180
           DGTK+EYRVWNPFRSKLA+AILGG+D+VWI PGAKVLYLGAASGTTVSHVSDI+GP GVV
Sbjct: 50  DGTKVEYRVWNPFRSKLAAAILGGVDDVWIKPGAKVLYLGAASGTTVSHVSDIVGPTGVV 109

Query: 181 YAVEFSHRSGRDLVNMAKKRTNIIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILA 360
           YAVEFSHRSGRDLVNMAKKRTN+IPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILA
Sbjct: 110 YAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILA 169

Query: 361 LNASYF 378
           LNASYF
Sbjct: 170 LNASYF 175


>ref|NP_568772.3| rRNA 2'-O-methyltransferase fibrillarin 1 [Arabidopsis thaliana]
           gi|67461076|sp|Q9FEF8.1|MD36B_ARATH RecName:
           Full=Probable mediator of RNA polymerase II
           transcription subunit 36b; AltName:
           Full=SKP1-interacting partner 7; AltName: Full=rRNA
           2'-O-methyltransferase fibrillarin 1
           gi|9965653|gb|AAG10103.1|AF233443_1 fibrillarin 1
           [Arabidopsis thaliana] gi|9965751|gb|AAG10152.1|
           fibrillarin 1 [Arabidopsis thaliana]
           gi|10177413|dbj|BAB10544.1| fibrillarin-like
           [Arabidopsis thaliana] gi|22654993|gb|AAM98088.1|
           AT5g52470/K24M7_22 [Arabidopsis thaliana]
           gi|28416513|gb|AAO42787.1| AT5g52470/K24M7_22
           [Arabidopsis thaliana] gi|110740295|dbj|BAF02044.1|
           fibrillarin homolog [Arabidopsis thaliana]
           gi|332008834|gb|AED96217.1| rRNA 2'-O-methyltransferase
           fibrillarin 1 [Arabidopsis thaliana]
          Length = 308

 Score =  242 bits (617), Expect = 3e-62
 Identities = 116/126 (92%), Positives = 124/126 (98%)
 Frame = +1

Query: 1   DGTKIEYRVWNPFRSKLASAILGGLDNVWIVPGAKVLYLGAASGTTVSHVSDIIGPEGVV 180
           DGTK+EYRVWNPFRSKLA+AILGG+DN+WI PGAKVLYLGAASGTTVSHVSD++GPEG V
Sbjct: 112 DGTKVEYRVWNPFRSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDLVGPEGCV 171

Query: 181 YAVEFSHRSGRDLVNMAKKRTNIIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILA 360
           YAVEFSHRSGRDLVNMAKKRTN+IPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILA
Sbjct: 172 YAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILA 231

Query: 361 LNASYF 378
           LNAS+F
Sbjct: 232 LNASFF 237


>ref|NP_567724.1| rRNA 2'-O-methyltransferase fibrillarin 2 [Arabidopsis thaliana]
           gi|67461067|sp|Q94AH9.2|MD36A_ARATH RecName:
           Full=Mediator of RNA polymerase II transcription subunit
           36a; AltName: Full=Fibrillarin-like protein 2; AltName:
           Full=rRNA 2'-O-methyltransferase fibrillarin 2
           gi|9965655|gb|AAG10104.1|AF233444_1 fibrillarin 2
           [Arabidopsis thaliana] gi|4914455|emb|CAB43694.1|
           fibrillarin-like protein [Arabidopsis thaliana]
           gi|7269413|emb|CAB81373.1| fibrillarin-like protein
           [Arabidopsis thaliana] gi|9965796|gb|AAG10153.1|
           fibrillarin 2 [Arabidopsis thaliana]
           gi|21536840|gb|AAM61172.1| fibrillarin 2 (AtFib2)
           [Arabidopsis thaliana] gi|23297150|gb|AAN13105.1|
           fibrillarin 2 (AtFib2) [Arabidopsis thaliana]
           gi|332659685|gb|AEE85085.1| rRNA 2'-O-methyltransferase
           fibrillarin 2 [Arabidopsis thaliana]
          Length = 320

 Score =  242 bits (617), Expect = 3e-62
 Identities = 117/126 (92%), Positives = 123/126 (97%)
 Frame = +1

Query: 1   DGTKIEYRVWNPFRSKLASAILGGLDNVWIVPGAKVLYLGAASGTTVSHVSDIIGPEGVV 180
           DGTK EYRVWNPFRSKLA+AILGG+DN+WI PGAKVLYLGAASGTTVSHVSD++GPEG V
Sbjct: 123 DGTKTEYRVWNPFRSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDLVGPEGCV 182

Query: 181 YAVEFSHRSGRDLVNMAKKRTNIIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILA 360
           YAVEFSHRSGRDLVNMAKKRTN+IPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILA
Sbjct: 183 YAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILA 242

Query: 361 LNASYF 378
           LNASYF
Sbjct: 243 LNASYF 248


Top