BLASTX nr result

ID: Aconitum21_contig00014077 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00014077
         (493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522720.1| DNA cross-link repair protein pso2/snm1, put...   113   2e-23
ref|XP_004144572.1| PREDICTED: 5' exonuclease Apollo-like [Cucum...   109   2e-22
ref|XP_003540866.1| PREDICTED: 5' exonuclease Apollo-like [Glyci...   105   4e-21
ref|XP_002272846.1| PREDICTED: 5' exonuclease Apollo [Vitis vini...   105   4e-21
ref|NP_174061.1| DNA repair metallo-beta-lactamase family protei...   100   1e-19

>ref|XP_002522720.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus
           communis] gi|223538070|gb|EEF39682.1| DNA cross-link
           repair protein pso2/snm1, putative [Ricinus communis]
          Length = 427

 Score =  113 bits (282), Expect = 2e-23
 Identities = 57/121 (47%), Positives = 77/121 (63%), Gaps = 4/121 (3%)
 Frame = +1

Query: 1   LEELNVIHPTIGIMPSGLPWVVRRXXXXXXXXXXXXXXXXXXXKTTNPRFRDVRSKPTEE 180
           LEELN +HPTIGIMPSGLPWVV+                    +  N +        T++
Sbjct: 245 LEELNKMHPTIGIMPSGLPWVVK-----PTKGDDNLFGSFLTSRYKNGKLSANGGTGTDK 299

Query: 181 LGG----IRKFHRYIYSVPYSDHSCFNELEEFLKLIRPLRMEGIVSSSSCCIDPIHYLGH 348
           L G    + + H+YIYSVPYSDHSCF+E++EF++L++P  M+GIVSSSSC I+P++Y G 
Sbjct: 300 LNGSVQSVERLHQYIYSVPYSDHSCFSEIQEFIELVQPTSMKGIVSSSSCYINPVYYFGR 359

Query: 349 L 351
           L
Sbjct: 360 L 360


>ref|XP_004144572.1| PREDICTED: 5' exonuclease Apollo-like [Cucumis sativus]
           gi|449493187|ref|XP_004159216.1| PREDICTED: 5'
           exonuclease Apollo-like [Cucumis sativus]
          Length = 428

 Score =  109 bits (273), Expect = 2e-22
 Identities = 57/126 (45%), Positives = 77/126 (61%)
 Frame = +1

Query: 1   LEELNVIHPTIGIMPSGLPWVVRRXXXXXXXXXXXXXXXXXXXKTTNPRFRDVRSKPTEE 180
           LE LN + PTIGIMPSGLPWVVR                    K  N     +  K T +
Sbjct: 245 LEGLNQMRPTIGIMPSGLPWVVRPHEGDGIPSGSLLITRYRQSKL-NENGPFLIEKQTGK 303

Query: 181 LGGIRKFHRYIYSVPYSDHSCFNELEEFLKLIRPLRMEGIVSSSSCCIDPIHYLGHLREG 360
           +  + K H+YI+SVPYSDH+CF+E++EF+KLI P  ++GIVSSSSC I+P++Y G L   
Sbjct: 304 VESVTKLHKYIFSVPYSDHACFSEIQEFIKLICPTTIKGIVSSSSCYIEPLYYFGRLCGA 363

Query: 361 EQVIEQ 378
           +Q + +
Sbjct: 364 KQPVNK 369


>ref|XP_003540866.1| PREDICTED: 5' exonuclease Apollo-like [Glycine max]
          Length = 437

 Score =  105 bits (262), Expect = 4e-21
 Identities = 53/126 (42%), Positives = 74/126 (58%)
 Frame = +1

Query: 1   LEELNVIHPTIGIMPSGLPWVVRRXXXXXXXXXXXXXXXXXXXKTTNPRFRDVRSKPTEE 180
           +EELN + PTIGIMPSGLPW+ +                    K +      +  K   +
Sbjct: 240 VEELNYVCPTIGIMPSGLPWIKKSHQKNELQTGSFLTSRYKRGKLSANTETQI-DKQIVK 298

Query: 181 LGGIRKFHRYIYSVPYSDHSCFNELEEFLKLIRPLRMEGIVSSSSCCIDPIHYLGHLREG 360
            G   K H+YIY+VPYSDHS + E+E+F+KL++P  ++GIVSSSSC I+P++Y G L  G
Sbjct: 299 TGSPEKIHKYIYTVPYSDHSNYEEIEDFVKLVKPTTLKGIVSSSSCYIEPMYYFGRLCPG 358

Query: 361 EQVIEQ 378
            Q  +Q
Sbjct: 359 NQQTDQ 364


>ref|XP_002272846.1| PREDICTED: 5' exonuclease Apollo [Vitis vinifera]
           gi|296081253|emb|CBI17997.3| unnamed protein product
           [Vitis vinifera]
          Length = 435

 Score =  105 bits (262), Expect = 4e-21
 Identities = 52/117 (44%), Positives = 70/117 (59%)
 Frame = +1

Query: 1   LEELNVIHPTIGIMPSGLPWVVRRXXXXXXXXXXXXXXXXXXXKTTNPRFRDVRSKPTEE 180
           LE LN + PTIGIMPSGLPWVV+                    K               +
Sbjct: 245 LEGLNTVRPTIGIMPSGLPWVVKPSEGNDNPAGPPSISHHCGNKRIINGGPRAEINKKGK 304

Query: 181 LGGIRKFHRYIYSVPYSDHSCFNELEEFLKLIRPLRMEGIVSSSSCCIDPIHYLGHL 351
           L  + +FH+YIYSVPYS+HSCF E+E+F+KL++P+ ++GIVSSS C I+P++Y G L
Sbjct: 305 LRSVVRFHQYIYSVPYSEHSCFPEIEDFIKLVQPINIKGIVSSSFCYIEPLYYFGGL 361


>ref|NP_174061.1| DNA repair metallo-beta-lactamase family protein [Arabidopsis
           thaliana] gi|9802533|gb|AAF99735.1|AC004557_14 F17L21.20
           [Arabidopsis thaliana] gi|17473671|gb|AAL38292.1|
           unknown protein [Arabidopsis thaliana]
           gi|20148601|gb|AAM10191.1| unknown protein [Arabidopsis
           thaliana] gi|332192705|gb|AEE30826.1| DNA repair
           metallo-beta-lactamase family protein [Arabidopsis
           thaliana]
          Length = 422

 Score =  100 bits (249), Expect = 1e-19
 Identities = 52/117 (44%), Positives = 68/117 (58%)
 Frame = +1

Query: 1   LEELNVIHPTIGIMPSGLPWVVRRXXXXXXXXXXXXXXXXXXXKTTNPRFRDVRSKPTEE 180
           LE LN + PTIGIMPSGLPWV R                     T + +   V +K   E
Sbjct: 243 LEGLNTMCPTIGIMPSGLPWVKRPFKGDDKLSGSFL--------TASMKNETVSAKKELE 294

Query: 181 LGGIRKFHRYIYSVPYSDHSCFNELEEFLKLIRPLRMEGIVSSSSCCIDPIHYLGHL 351
              + KFH Y+YSV YSDHSC+ E+ EF+KL++P  M+GIV SSS  +DP++Y G +
Sbjct: 295 AAAVHKFHDYMYSVHYSDHSCYEEIGEFIKLVKPKSMKGIVVSSSSYVDPLYYFGRI 351