BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00014036
         (923 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAC76085.1| replication factor C 110 kDa subunit [Oryza sati...    90   8e-16
ref|NP_001068123.1| Os11g0572100 [Oryza sativa Japonica Group] g...    90   8e-16
ref|XP_003540824.1| PREDICTED: replication factor C subunit 1-li...    88   2e-15
ref|XP_002298160.1| predicted protein [Populus trichocarpa] gi|2...    88   3e-15
ref|NP_680188.1| replication factor C1 [Arabidopsis thaliana] gi...    86   9e-15

>dbj|BAC76085.1| replication factor C 110 kDa subunit [Oryza sativa Japonica Group]
          Length = 1021

 Score = 89.7 bits (221), Expect = 8e-16
 Identities = 65/150 (43%), Positives = 80/150 (53%), Gaps = 17/150 (11%)
 Frame = -3

Query: 429 SDIRKWFIRQHDKNNGXXXXXXXXXXAQKP-LATASKPKISEQEGP---GTSGRKKTSKY 262
           SDIRKWF++  DKN G          A+KP L+   KP  +          S R+KTSKY
Sbjct: 3   SDIRKWFMKAQDKNGGAAKPAGTTALAKKPVLSIPEKPSAAPSMAACDQDCSARRKTSKY 62

Query: 261 FASDAEKVTDKTS--------PKRKPPQKSSE--DDVKPPSAKKLHKHE---GDDDFVPP 121
           FAS  EK  D ++        PKRK  + S E  DD+KP  AK++HK E    DDDFV P
Sbjct: 63  FASKTEKEEDTSAGKGTGRGLPKRKLQKVSDELEDDMKPLPAKEVHKEEEDDDDDDFVAP 122

Query: 120 SINKNSVEVTPTKKSKGASGRGTAKKSVKT 31
           S  K  V+  P+KK KGAS   TA+   KT
Sbjct: 123 SKRKTPVKPPPSKKLKGAS---TAEAHGKT 149


>ref|NP_001068123.1| Os11g0572100 [Oryza sativa Japonica Group]
           gi|108864532|gb|ABA94349.2| BRCA1 C Terminus domain
           containing protein, expressed [Oryza sativa Japonica
           Group] gi|113645345|dbj|BAF28486.1| Os11g0572100 [Oryza
           sativa Japonica Group] gi|215697840|dbj|BAG92033.1|
           unnamed protein product [Oryza sativa Japonica Group]
          Length = 1021

 Score = 89.7 bits (221), Expect = 8e-16
 Identities = 65/150 (43%), Positives = 80/150 (53%), Gaps = 17/150 (11%)
 Frame = -3

Query: 429 SDIRKWFIRQHDKNNGXXXXXXXXXXAQKP-LATASKPKISEQEGP---GTSGRKKTSKY 262
           SDIRKWF++  DKN G          A+KP L+   KP  +          S R+KTSKY
Sbjct: 3   SDIRKWFMKAQDKNGGAAKPAGTTALAKKPVLSIPEKPSAAPSMAACDQDCSARRKTSKY 62

Query: 261 FASDAEKVTDKTS--------PKRKPPQKSSE--DDVKPPSAKKLHKHE---GDDDFVPP 121
           FAS  EK  D ++        PKRK  + S E  DD+KP  AK++HK E    DDDFV P
Sbjct: 63  FASKTEKEEDTSAGKGTGRGLPKRKLQKVSDELEDDMKPLPAKEVHKEEEDDDDDDFVAP 122

Query: 120 SINKNSVEVTPTKKSKGASGRGTAKKSVKT 31
           S  K  V+  P+KK KGAS   TA+   KT
Sbjct: 123 SKRKTPVKPPPSKKLKGAS---TAEAHGKT 149


>ref|XP_003540824.1| PREDICTED: replication factor C subunit 1-like [Glycine max]
          Length = 1112

 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 52/137 (37%), Positives = 75/137 (54%), Gaps = 3/137 (2%)
 Frame = -3

Query: 429 SDIRKWFIRQHDKNNGXXXXXXXXXXAQKPLATASKPKISEQEGPG--TSGRKKTSKYFA 256
           SDIRKWF++ HDK N             +P  ++ KP+  +    G  +SGR+ TSKYF 
Sbjct: 163 SDIRKWFMKTHDKGNNAASSKPS----NQPKPSSDKPQSEKTVAGGQESSGRRITSKYFN 218

Query: 255 SDAEKVTDKTSPKRKP-PQKSSEDDVKPPSAKKLHKHEGDDDFVPPSINKNSVEVTPTKK 79
           S+ +K  DK   +  P  +K+ +D  + P  KK+H+ +GDD  +P +  K   + TPTKK
Sbjct: 219 SNKQKGKDKKEMQELPAKRKNMKDSEEIPEPKKIHEDDGDDSVLPTN-KKKLADTTPTKK 277

Query: 78  SKGASGRGTAKKSVKTE 28
            K  SGRG  +KS   E
Sbjct: 278 LKSGSGRGLPQKSAVLE 294


>ref|XP_002298160.1| predicted protein [Populus trichocarpa] gi|222845418|gb|EEE82965.1|
           predicted protein [Populus trichocarpa]
          Length = 550

 Score = 87.8 bits (216), Expect = 3e-15
 Identities = 54/137 (39%), Positives = 77/137 (56%), Gaps = 7/137 (5%)
 Frame = -3

Query: 426 DIRKWFIRQHDKNNGXXXXXXXXXXAQKPLATASKPKISEQEGPGTSGRKKTSKYFASDA 247
           DIRKWF++ HDK N            +KP  T  K +     G   SGR+KTSKYFA++ 
Sbjct: 4   DIRKWFMKAHDKGNDNAATNAE----KKPPPTEPKTETPVCGGQEGSGRRKTSKYFAANK 59

Query: 246 EKVTDKTSPKRKPPQKSSEDD----VKPPSAKKLHK---HEGDDDFVPPSINKNSVEVTP 88
           +K  +    +  P ++ +++D    VKPP +KK+HK    E DDDF   S+ K   + +P
Sbjct: 60  QKQKEDKEIEDLPAKRKAQNDGVQSVKPPPSKKVHKVDDEEEDDDF---SLPKKKNDASP 116

Query: 87  TKKSKGASGRGTAKKSV 37
           +KK K +SGRG A+K V
Sbjct: 117 SKKLKSSSGRGIAQKPV 133


>ref|NP_680188.1| replication factor C1 [Arabidopsis thaliana]
           gi|13374860|emb|CAC34494.1| replication factor C large
           subunit-like protein [Arabidopsis thaliana]
           gi|48958527|gb|AAT47816.1| At5g22010 [Arabidopsis
           thaliana] gi|332005585|gb|AED92968.1| replication factor
           C1 [Arabidopsis thaliana]
          Length = 956

 Score = 86.3 bits (212), Expect = 9e-15
 Identities = 55/142 (38%), Positives = 76/142 (53%), Gaps = 7/142 (4%)
 Frame = -3

Query: 432 MSDIRKWFIRQHDKNNGXXXXXXXXXXAQKPLATASKPKISEQ--EGPGTSGRKKTSKYF 259
           MSDIRKWF++ H+K NG               A  + P  SEQ  E   T+ R+KTSKYF
Sbjct: 1   MSDIRKWFMKAHEKGNGSAPKSTSSKAGPVKNAAETAPIKSEQASEDLETADRRKTSKYF 60

Query: 258 ASDAEKVTDKTSPKRKPPQ---KSSEDDVKPPSAKKLHK--HEGDDDFVPPSINKNSVEV 94
             D  KV D+   +  P +   K+  DD+  P  +K+ K   + DDDF  P I++ + + 
Sbjct: 61  GKDKTKVKDEKEVEAIPAKRKLKTESDDLVKPRPRKVTKVVDDDDDDFDVP-ISRKTRDT 119

Query: 93  TPTKKSKGASGRGTAKKSVKTE 28
           TP+KK K  SGRG A K+V  +
Sbjct: 120 TPSKKLKSGSGRGIASKTVDND 141