BLASTX nr result

ID: Aconitum21_contig00014022 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00014022
         (555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533227.1| translation initiation factor if-3, putative...    76   4e-12
ref|XP_002276984.1| PREDICTED: translation initiation factor IF-...    75   9e-12
ref|XP_002878716.1| hypothetical protein ARALYDRAFT_481264 [Arab...    71   1e-10
ref|NP_179984.1| translation initiation factor IF-3 [Arabidopsis...    71   1e-10
ref|XP_004163986.1| PREDICTED: LOW QUALITY PROTEIN: translation ...    69   5e-10

>ref|XP_002533227.1| translation initiation factor if-3, putative [Ricinus communis]
           gi|223526947|gb|EEF29148.1| translation initiation
           factor if-3, putative [Ricinus communis]
          Length = 274

 Score = 75.9 bits (185), Expect = 4e-12
 Identities = 40/55 (72%), Positives = 47/55 (85%)
 Frame = +3

Query: 390 KNEFEADPALDISTIRSTSVRLIDAEQNMVGVVSKSEAIQMAEESSLDLVILSSD 554
           +++ E D ALDISTIRS +VRLID +QNMVGVV KSEAIQMAE ++LDLVILS D
Sbjct: 76  QSDSEDDHALDISTIRSATVRLIDEQQNMVGVVPKSEAIQMAENAALDLVILSPD 130


>ref|XP_002276984.1| PREDICTED: translation initiation factor IF-3 [Vitis vinifera]
           gi|297743667|emb|CBI36550.3| unnamed protein product
           [Vitis vinifera]
          Length = 272

 Score = 74.7 bits (182), Expect = 9e-12
 Identities = 37/55 (67%), Positives = 47/55 (85%)
 Frame = +3

Query: 390 KNEFEADPALDISTIRSTSVRLIDAEQNMVGVVSKSEAIQMAEESSLDLVILSSD 554
           + + + D ALD+S+IRS SVRLID +QNMVGVVSKS+AIQMAE++ LDLV+LS D
Sbjct: 74  QRDSDDDQALDVSSIRSASVRLIDEQQNMVGVVSKSQAIQMAEDAELDLVVLSPD 128


>ref|XP_002878716.1| hypothetical protein ARALYDRAFT_481264 [Arabidopsis lyrata subsp.
           lyrata] gi|297324555|gb|EFH54975.1| hypothetical protein
           ARALYDRAFT_481264 [Arabidopsis lyrata subsp. lyrata]
          Length = 292

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 35/53 (66%), Positives = 45/53 (84%)
 Frame = +3

Query: 396 EFEADPALDISTIRSTSVRLIDAEQNMVGVVSKSEAIQMAEESSLDLVILSSD 554
           E E D ALDIS+IRS +VRLID +QNM+G+VSK EA++MA+++ LDLVILS D
Sbjct: 85  EAEIDEALDISSIRSATVRLIDGQQNMLGLVSKDEAVRMADDAELDLVILSPD 137


>ref|NP_179984.1| translation initiation factor IF-3 [Arabidopsis thaliana]
           gi|3738333|gb|AAC63674.1| putative chloroplast
           initiation factor 3 [Arabidopsis thaliana]
           gi|18176092|gb|AAL59982.1| putative chloroplast
           initiation factor 3 [Arabidopsis thaliana]
           gi|20465301|gb|AAM20054.1| putative chloroplast
           initiation factor 3 [Arabidopsis thaliana]
           gi|21593709|gb|AAM65676.1| putative chloroplast
           initiation factor 3 [Arabidopsis thaliana]
           gi|330252430|gb|AEC07524.1| translation initiation
           factor IF-3 [Arabidopsis thaliana]
          Length = 312

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 35/53 (66%), Positives = 45/53 (84%)
 Frame = +3

Query: 396 EFEADPALDISTIRSTSVRLIDAEQNMVGVVSKSEAIQMAEESSLDLVILSSD 554
           E E D ALDIS+IRS +VRLID +QNM+G+VSK EA++MA+++ LDLVILS D
Sbjct: 83  EAEIDEALDISSIRSATVRLIDGQQNMLGLVSKDEAVRMADDAELDLVILSPD 135


>ref|XP_004163986.1| PREDICTED: LOW QUALITY PROTEIN: translation initiation factor
           IF-3-like [Cucumis sativus]
          Length = 299

 Score = 68.9 bits (167), Expect = 5e-10
 Identities = 34/46 (73%), Positives = 42/46 (91%)
 Frame = +3

Query: 417 LDISTIRSTSVRLIDAEQNMVGVVSKSEAIQMAEESSLDLVILSSD 554
           LDIS I+S +VRLIDAEQNMVGVVSK++AIQMAE++ LDLV++S D
Sbjct: 110 LDISAIKSINVRLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPD 155


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