BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00013988
         (774 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_178203.1| pentatricopeptide repeat-containing protein [Ar...   107   2e-21
ref|XP_002332054.1| predicted protein [Populus trichocarpa] gi|2...   107   2e-21
ref|XP_002263537.1| PREDICTED: pentatricopeptide repeat-containi...   106   6e-21
emb|CBI25186.3| unnamed protein product [Vitis vinifera]              106   6e-21
ref|XP_002512730.1| pentatricopeptide repeat-containing protein,...   104   2e-20

>ref|NP_178203.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75200729|sp|Q9SAH2.1|PP137_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g80880, mitochondrial; Flags: Precursor
           gi|6503300|gb|AAF14676.1|AC011713_24 Contains PF|01535
           Domain of unknown function [Arabidopsis thaliana]
           gi|91806121|gb|ABE65789.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
           gi|332198342|gb|AEE36463.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 540

 Score =  107 bits (268), Expect = 2e-21
 Identities = 60/169 (35%), Positives = 88/169 (52%), Gaps = 1/169 (0%)
 Frame = -1

Query: 558 FQPSNLSTRSYSSAIHPSLLSLATTQCFRPHQFPLRFSPSQTLYETIGFKLVPTESKNPG 379
           F  S     S+SSA H +    +    + PH        ++T+ ET    L        G
Sbjct: 34  FSSSVSQNHSFSSAFHRAGHVHSQVLSYLPHFASSNRFSTKTISETFDINLTALAPLEKG 93

Query: 378 SVDRVVEILKKTNHLSSE-EAIHFLDAMGVQPTGGLVCSVIWELRDEWKLAMLVFRWSEK 202
            +D    ++++ + L SE +A+  L+            S+IWELRDEW+LA L F+W EK
Sbjct: 94  LID----LIRQVSELESEADAMASLEDSSFDLNHDSFYSLIWELRDEWRLAFLAFKWGEK 149

Query: 201 CGCSDSRACDLMIWVLGQQGRFGKAWRIIRHMLGSSMDARQALLIMIER 55
            GC D ++CDLMIWVLG   +F  AW +IR M   S D R+A+ +M++R
Sbjct: 150 RGCDDQKSCDLMIWVLGNHQKFNIAWCLIRDMFNVSKDTRKAMFLMMDR 198


>ref|XP_002332054.1| predicted protein [Populus trichocarpa] gi|222831940|gb|EEE70417.1|
           predicted protein [Populus trichocarpa]
          Length = 444

 Score =  107 bits (268), Expect = 2e-21
 Identities = 51/96 (53%), Positives = 67/96 (69%), Gaps = 1/96 (1%)
 Frame = -1

Query: 339 HLSSE-EAIHFLDAMGVQPTGGLVCSVIWELRDEWKLAMLVFRWSEKCGCSDSRACDLMI 163
           HL SE EA+  LD  G++    LV SVIWELR+EW+LA L F+W +K GC D +AC+LM+
Sbjct: 4   HLPSEAEAMASLDESGIRANQNLVYSVIWELREEWRLAFLAFKWGDKWGCVDEKACELMV 63

Query: 162 WVLGQQGRFGKAWRIIRHMLGSSMDARQALLIMIER 55
           WVLG   +F  AW +IR +  S M  R+A+LIMI+R
Sbjct: 64  WVLGNHRKFNTAWILIRDLHRSLMSTRKAMLIMIDR 99


>ref|XP_002263537.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80880,
           mitochondrial-like [Vitis vinifera]
          Length = 537

 Score =  106 bits (264), Expect = 6e-21
 Identities = 67/166 (40%), Positives = 91/166 (54%), Gaps = 9/166 (5%)
 Frame = -1

Query: 525 SSAIHPSLLSLATTQCFRPHQFPLRFSPSQTLYETIGFKLV--------PTESKNPGSVD 370
           S ++    L+   T   +P    LR   +QTLY+   F L+        P ES  P    
Sbjct: 30  SHSLQTLSLTFPRTPLDKPRFSVLRHLSTQTLYDP--FDLIRCKDDVCDPLESGLP---- 83

Query: 369 RVVEILKKTNHLSSE-EAIHFLDAMGVQPTGGLVCSVIWELRDEWKLAMLVFRWSEKCGC 193
              E+LK+   LSSE E +  LD  GV+P   LV   IW LR++W+LA  VF W EK GC
Sbjct: 84  ---ELLKRLEGLSSEAEVMAVLDGSGVEPNQELVYWAIWGLREDWRLAYWVFNWGEKWGC 140

Query: 192 SDSRACDLMIWVLGQQGRFGKAWRIIRHMLGSSMDARQALLIMIER 55
           +  R   L+IW+LG   +FG AW +IR +  SS+D R+A+LIMI+R
Sbjct: 141 NSERTRGLVIWILGNCKKFGVAWCLIRELHRSSVDTRRAMLIMIDR 186


>emb|CBI25186.3| unnamed protein product [Vitis vinifera]
          Length = 548

 Score =  106 bits (264), Expect = 6e-21
 Identities = 67/166 (40%), Positives = 91/166 (54%), Gaps = 9/166 (5%)
 Frame = -1

Query: 525 SSAIHPSLLSLATTQCFRPHQFPLRFSPSQTLYETIGFKLV--------PTESKNPGSVD 370
           S ++    L+   T   +P    LR   +QTLY+   F L+        P ES  P    
Sbjct: 30  SHSLQTLSLTFPRTPLDKPRFSVLRHLSTQTLYDP--FDLIRCKDDVCDPLESGLP---- 83

Query: 369 RVVEILKKTNHLSSE-EAIHFLDAMGVQPTGGLVCSVIWELRDEWKLAMLVFRWSEKCGC 193
              E+LK+   LSSE E +  LD  GV+P   LV   IW LR++W+LA  VF W EK GC
Sbjct: 84  ---ELLKRLEGLSSEAEVMAVLDGSGVEPNQELVYWAIWGLREDWRLAYWVFNWGEKWGC 140

Query: 192 SDSRACDLMIWVLGQQGRFGKAWRIIRHMLGSSMDARQALLIMIER 55
           +  R   L+IW+LG   +FG AW +IR +  SS+D R+A+LIMI+R
Sbjct: 141 NSERTRGLVIWILGNCKKFGVAWCLIRELHRSSVDTRRAMLIMIDR 186


>ref|XP_002512730.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547741|gb|EEF49233.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 552

 Score =  104 bits (260), Expect = 2e-20
 Identities = 58/139 (41%), Positives = 84/139 (60%), Gaps = 5/139 (3%)
 Frame = -1

Query: 456 LRFSPSQTLY---ETIGFKLVPTESKNPGSVDR-VVEILKKTNHLSSE-EAIHFLDAMGV 292
           LRFS SQ+     +   F+L      N   + + ++E LK+  +   E EA+  +D  GV
Sbjct: 60  LRFSGSQSFSSQNQKYPFELFEHRIYNHDPLTQGLLETLKRAAYFPGEAEAMACIDGSGV 119

Query: 291 QPTGGLVCSVIWELRDEWKLAMLVFRWSEKCGCSDSRACDLMIWVLGQQGRFGKAWRIIR 112
           +    LV SVIWELR +WKLA L F+W EK GC D ++C+L++W+LG   +F  AW +IR
Sbjct: 120 KANINLVYSVIWELRKDWKLAFLGFKWGEKWGCIDEKSCELIVWILGNHRKFNNAWIVIR 179

Query: 111 HMLGSSMDARQALLIMIER 55
            M   SM+ +Q +LIMI+R
Sbjct: 180 DMHQLSMNIQQTMLIMIDR 198