BLASTX nr result

ID: Aconitum21_contig00013857 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00013857
         (1073 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327279.1| predicted protein [Populus trichocarpa] gi|2...   218   2e-54
ref|NP_564172.1| C3HC4-type RING finger protein [Arabidopsis tha...   212   1e-52
gb|AAM63145.1| unknown [Arabidopsis thaliana]                         212   1e-52
ref|XP_002887420.1| zinc finger family protein [Arabidopsis lyra...   211   2e-52
ref|XP_002325966.1| predicted protein [Populus trichocarpa] gi|2...   211   2e-52

>ref|XP_002327279.1| predicted protein [Populus trichocarpa] gi|222835649|gb|EEE74084.1|
           predicted protein [Populus trichocarpa]
          Length = 185

 Score =  218 bits (555), Expect = 2e-54
 Identities = 101/179 (56%), Positives = 121/179 (67%)
 Frame = -3

Query: 912 NDCCSVCHDNFNNPCQANCSHWFCSNCILRVWHHGSALQPCKCPICRRTITLLIPSEESL 733
           NDCC++CH +FN  CQANCSHWFC +CI+ VWHHGS LQPCKCP+CRR ITLL+P E SL
Sbjct: 7   NDCCAICHGHFNIACQANCSHWFCGDCIMLVWHHGSVLQPCKCPLCRRQITLLVPGEASL 66

Query: 732 EHRNDPIVSEALENIERYNRLFGGGASSLIQXXXXXXXXXXXXXRELTDPQRSLPLVFRA 553
             RNDP V+E L  IERYN LFGG  SSL+Q             RE+ DPQRSLP+V +A
Sbjct: 67  RERNDPHVAEVLGKIERYNHLFGGNTSSLVQRMQDLPFLLRRLLREIMDPQRSLPVVIKA 126

Query: 552 RMFFAMILSAIYILSPIDIIPEXXXXXXXXXXXXXXXXXXXXXIAAIYRSALLSRHGGT 376
           R++ AM+LSA+YI+SP+DIIPE                     +AAIYRS L  RHGG+
Sbjct: 127 RVYIAMVLSAVYIISPVDIIPEGILGIVGLLDDLLIVLICFLHVAAIYRSVLYYRHGGS 185


>ref|NP_564172.1| C3HC4-type RING finger protein [Arabidopsis thaliana]
           gi|110740529|dbj|BAE98370.1| hypothetical protein
           [Arabidopsis thaliana] gi|332192128|gb|AEE30249.1|
           C3HC4-type RING finger protein [Arabidopsis thaliana]
          Length = 185

 Score =  212 bits (540), Expect = 1e-52
 Identities = 99/179 (55%), Positives = 123/179 (68%)
 Frame = -3

Query: 912 NDCCSVCHDNFNNPCQANCSHWFCSNCILRVWHHGSALQPCKCPICRRTITLLIPSEESL 733
           N+ CS+CH +FN PCQ+NCSHWFC NCI+ VW HGS L+PCKCP+CRR I+LL+PSEE++
Sbjct: 7   NELCSICHGHFNAPCQSNCSHWFCGNCIMLVWRHGSTLRPCKCPLCRRPISLLVPSEETV 66

Query: 732 EHRNDPIVSEALENIERYNRLFGGGASSLIQXXXXXXXXXXXXXRELTDPQRSLPLVFRA 553
             RND  VSE L ++E YNR+FGG +S LIQ             RE+ DPQR+LPLV RA
Sbjct: 67  RSRNDATVSEVLHDVETYNRVFGGQSSGLIQRMQDLPFLLRRLLREMMDPQRTLPLVIRA 126

Query: 552 RMFFAMILSAIYILSPIDIIPEXXXXXXXXXXXXXXXXXXXXXIAAIYRSALLSRHGGT 376
           R++ A+ILSAIYI+SPIDIIPE                     +AA+YRS L SRHGG+
Sbjct: 127 RVYIALILSAIYIISPIDIIPEGVLGVIGLLDDLLIALICFLHVAALYRSVLYSRHGGS 185


>gb|AAM63145.1| unknown [Arabidopsis thaliana]
          Length = 185

 Score =  212 bits (540), Expect = 1e-52
 Identities = 99/179 (55%), Positives = 123/179 (68%)
 Frame = -3

Query: 912 NDCCSVCHDNFNNPCQANCSHWFCSNCILRVWHHGSALQPCKCPICRRTITLLIPSEESL 733
           N+ CS+CH +FN PCQ+NCSHWFC NCI+ VW HGS L+PCKCP+CRR I+LL+PSEE++
Sbjct: 7   NEVCSICHGHFNAPCQSNCSHWFCGNCIMLVWRHGSTLRPCKCPLCRRPISLLVPSEETV 66

Query: 732 EHRNDPIVSEALENIERYNRLFGGGASSLIQXXXXXXXXXXXXXRELTDPQRSLPLVFRA 553
             RND  VSE L ++E YNR+FGG +S LIQ             RE+ DPQR+LPLV RA
Sbjct: 67  RSRNDATVSEVLHDVETYNRVFGGQSSGLIQRMQDLPFLLRRLLREMMDPQRTLPLVIRA 126

Query: 552 RMFFAMILSAIYILSPIDIIPEXXXXXXXXXXXXXXXXXXXXXIAAIYRSALLSRHGGT 376
           R++ A+ILSAIYI+SPIDIIPE                     +AA+YRS L SRHGG+
Sbjct: 127 RVYIALILSAIYIISPIDIIPEGVLGVIGLLDDLLIALICFLHVAALYRSVLYSRHGGS 185


>ref|XP_002887420.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297333261|gb|EFH63679.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 185

 Score =  211 bits (537), Expect = 2e-52
 Identities = 98/179 (54%), Positives = 122/179 (68%)
 Frame = -3

Query: 912 NDCCSVCHDNFNNPCQANCSHWFCSNCILRVWHHGSALQPCKCPICRRTITLLIPSEESL 733
           ND CS+CH +F  PCQANCSHWFC NCI++VW HGS LQPCKCP+CRR I+LL+PSE+++
Sbjct: 7   NDLCSICHSHFTAPCQANCSHWFCGNCIMQVWRHGSTLQPCKCPLCRRPISLLVPSEDTI 66

Query: 732 EHRNDPIVSEALENIERYNRLFGGGASSLIQXXXXXXXXXXXXXRELTDPQRSLPLVFRA 553
             RND  V++ L N+E YNRLFGG ++SL+Q             RE+ DPQR+LPLV RA
Sbjct: 67  RDRNDSTVADVLGNLETYNRLFGGRSTSLVQRMQDLPFLLRRLLREMMDPQRTLPLVIRA 126

Query: 552 RMFFAMILSAIYILSPIDIIPEXXXXXXXXXXXXXXXXXXXXXIAAIYRSALLSRHGGT 376
           R++ AMILSAIYI+SPIDIIPE                     +AA+YRS L  RH G+
Sbjct: 127 RVYIAMILSAIYIISPIDIIPEGVLGIVGLLDDLLIALIAFLHVAALYRSVLYFRHAGS 185


>ref|XP_002325966.1| predicted protein [Populus trichocarpa] gi|222862841|gb|EEF00348.1|
           predicted protein [Populus trichocarpa]
          Length = 185

 Score =  211 bits (537), Expect = 2e-52
 Identities = 101/179 (56%), Positives = 119/179 (66%)
 Frame = -3

Query: 912 NDCCSVCHDNFNNPCQANCSHWFCSNCILRVWHHGSALQPCKCPICRRTITLLIPSEESL 733
           ND CS+CH +FN  CQANCSHWFC +CI+ VWHHGS LQPCKCP+CRR ITLL+P E SL
Sbjct: 7   NDFCSICHGHFNIACQANCSHWFCGDCIMLVWHHGSVLQPCKCPLCRRQITLLVPGEASL 66

Query: 732 EHRNDPIVSEALENIERYNRLFGGGASSLIQXXXXXXXXXXXXXRELTDPQRSLPLVFRA 553
             R+DP V+E L  IERYN LFGG  S LIQ             RE+ DPQRSLPLV RA
Sbjct: 67  RERSDPDVAEVLGKIERYNHLFGGNTSGLIQRMQDLPFLLRRLLREIMDPQRSLPLVIRA 126

Query: 552 RMFFAMILSAIYILSPIDIIPEXXXXXXXXXXXXXXXXXXXXXIAAIYRSALLSRHGGT 376
           R++ A++LSAIY++SPIDIIPE                     +AAIYR+ L  RHGG+
Sbjct: 127 RVYIAVVLSAIYVISPIDIIPEGILGIVGLLDDLLVVLICFLHVAAIYRAVLHYRHGGS 185


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