BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00013809
         (757 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II su...   457   e-126
ref|XP_003537656.1| PREDICTED: DNA-directed RNA polymerase II su...   443   e-122
ref|XP_002530639.1| DNA-directed RNA polymerase II largest subun...   442   e-122
ref|XP_003517152.1| PREDICTED: DNA-directed RNA polymerase II su...   441   e-122
emb|CBI18915.3| unnamed protein product [Vitis vinifera]              441   e-122

>ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Vitis
           vinifera]
          Length = 1848

 Score =  457 bits (1176), Expect = e-126
 Identities = 219/251 (87%), Positives = 237/251 (94%)
 Frame = -3

Query: 755 FSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDTRLGTIDRKQKC 576
           +SPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSD RLGTIDRK KC
Sbjct: 7   YSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTIDRKMKC 66

Query: 575 ETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDSKFKQAQR 396
           ETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADE+D KFKQAQ+
Sbjct: 67  ETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHKFKQAQK 126

Query: 395 IRNPKHRLKKVLDACKNKTKCDGGDEIESQGQDLEEPVKKSRGGCGAQQPKITIDGMKMV 216
           IRNPK+RLKK+LDACKNK+KC+GGDEIE+Q  D +EPVKKSRGGCGAQQPK+TI+GMKM+
Sbjct: 127 IRNPKNRLKKILDACKNKSKCEGGDEIETQALDSDEPVKKSRGGCGAQQPKLTIEGMKMI 186

Query: 215 AEYKAQRKKNDDTEQLPEPAERKQQLTAERVLSVLKRVTDEDCVLLGLDPKYARPDWMIL 36
           AEYK QRKKNDD EQLPEP ERKQQL+AERVL+VLKR++DEDC+LLGL+PKYARPDWMIL
Sbjct: 187 AEYKIQRKKNDDPEQLPEPVERKQQLSAERVLNVLKRISDEDCILLGLNPKYARPDWMIL 246

Query: 35  QVLXXXXXPVR 3
           QVL     PVR
Sbjct: 247 QVLPIPPPPVR 257


>ref|XP_003537656.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like
           [Glycine max]
          Length = 1827

 Score =  443 bits (1140), Expect = e-122
 Identities = 215/251 (85%), Positives = 232/251 (92%)
 Frame = -3

Query: 755 FSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDTRLGTIDRKQKC 576
           FSPAEVAKVRMVQFGILSPDEIRQMSVVQIEH ETTERGKPK GGLSD RLGTIDRK KC
Sbjct: 7   FSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTIDRKLKC 66

Query: 575 ETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDSKFKQAQR 396
           ETCTA+MAECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKILADE+D KFKQA R
Sbjct: 67  ETCTASMAECPGHFGHLELAKPMFHIGFLKTVLTIMRCVCFNCSKILADENDHKFKQALR 126

Query: 395 IRNPKHRLKKVLDACKNKTKCDGGDEIESQGQDLEEPVKKSRGGCGAQQPKITIDGMKMV 216
           IRNPK+RLKK+LDACKNK+KC+GGDEI+  GQD +EPVKKSRGGCGAQQPKITI+GMKM+
Sbjct: 127 IRNPKNRLKKILDACKNKSKCEGGDEIDIPGQDTDEPVKKSRGGCGAQQPKITIEGMKMI 186

Query: 215 AEYKAQRKKNDDTEQLPEPAERKQQLTAERVLSVLKRVTDEDCVLLGLDPKYARPDWMIL 36
           AEYKAQRKK+DD EQLPEP ERKQ L+AERVL VLKR++DEDC LLGL+PKYARPDWMIL
Sbjct: 187 AEYKAQRKKSDDQEQLPEPVERKQTLSAERVLGVLKRISDEDCQLLGLNPKYARPDWMIL 246

Query: 35  QVLXXXXXPVR 3
           QVL     PVR
Sbjct: 247 QVLPIPPPPVR 257


>ref|XP_002530639.1| DNA-directed RNA polymerase II largest subunit, putative [Ricinus
           communis] gi|223529812|gb|EEF31747.1| DNA-directed RNA
           polymerase II largest subunit, putative [Ricinus
           communis]
          Length = 1855

 Score =  442 bits (1137), Expect = e-122
 Identities = 212/251 (84%), Positives = 231/251 (92%)
 Frame = -3

Query: 755 FSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDTRLGTIDRKQKC 576
           +SPAEVAKVRMVQFGILSPDEIRQMSVVQIE SETTERGKPKPGGLSD RLGTIDRK KC
Sbjct: 7   YSPAEVAKVRMVQFGILSPDEIRQMSVVQIEFSETTERGKPKPGGLSDLRLGTIDRKMKC 66

Query: 575 ETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDSKFKQAQR 396
           ETCTANMAECPGHFGHLELAKPMFHIGF+KTVLSIMRCVCFNCSKILADE+D KFKQA +
Sbjct: 67  ETCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDHKFKQALK 126

Query: 395 IRNPKHRLKKVLDACKNKTKCDGGDEIESQGQDLEEPVKKSRGGCGAQQPKITIDGMKMV 216
           I+NPK+RLKK+LDACKNKTKC+GGD+I+   QD +EPVKKSRGGCGAQQP++TI+GMKM+
Sbjct: 127 IKNPKNRLKKILDACKNKTKCEGGDDIDVHSQDTDEPVKKSRGGCGAQQPRMTIEGMKMI 186

Query: 215 AEYKAQRKKNDDTEQLPEPAERKQQLTAERVLSVLKRVTDEDCVLLGLDPKYARPDWMIL 36
           AEYKAQRKKNDD EQLPEP ERKQ LTAERVL VLKR++D+DC LLG +PKYARPDWMIL
Sbjct: 187 AEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDDDCRLLGFNPKYARPDWMIL 246

Query: 35  QVLXXXXXPVR 3
           QVL     PVR
Sbjct: 247 QVLPIPPPPVR 257


>ref|XP_003517152.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like
           [Glycine max]
          Length = 1827

 Score =  441 bits (1135), Expect = e-122
 Identities = 215/251 (85%), Positives = 231/251 (92%)
 Frame = -3

Query: 755 FSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDTRLGTIDRKQKC 576
           FSPAEVAKVRMVQFGILSPDEIRQMSVVQIEH ETTERGKPK GGLSD RLGTIDRK KC
Sbjct: 7   FSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTIDRKLKC 66

Query: 575 ETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDSKFKQAQR 396
           ETCTA+MAECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKILADE+D KFKQA R
Sbjct: 67  ETCTASMAECPGHFGHLELAKPMFHIGFLKTVLTIMRCVCFNCSKILADENDHKFKQALR 126

Query: 395 IRNPKHRLKKVLDACKNKTKCDGGDEIESQGQDLEEPVKKSRGGCGAQQPKITIDGMKMV 216
           IRNPK+RLKK+LDACKNK+KC+GGDEI+  GQD EE VKKSRGGCGAQQPKITI+GMKM+
Sbjct: 127 IRNPKNRLKKILDACKNKSKCEGGDEIDIPGQDTEESVKKSRGGCGAQQPKITIEGMKMI 186

Query: 215 AEYKAQRKKNDDTEQLPEPAERKQQLTAERVLSVLKRVTDEDCVLLGLDPKYARPDWMIL 36
           AEYKAQRKK+DD EQLPEP ERKQ L+AERVL VLKR++DEDC LLGL+PKYARPDWMIL
Sbjct: 187 AEYKAQRKKSDDQEQLPEPVERKQTLSAERVLGVLKRISDEDCQLLGLNPKYARPDWMIL 246

Query: 35  QVLXXXXXPVR 3
           QVL     PVR
Sbjct: 247 QVLPIPPPPVR 257


>emb|CBI18915.3| unnamed protein product [Vitis vinifera]
          Length = 1565

 Score =  441 bits (1135), Expect = e-122
 Identities = 219/281 (77%), Positives = 237/281 (84%), Gaps = 30/281 (10%)
 Frame = -3

Query: 755 FSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDTRLGTIDRKQKC 576
           +SPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSD RLGTIDRK KC
Sbjct: 7   YSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTIDRKMKC 66

Query: 575 ETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADE---------- 426
           ETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADE          
Sbjct: 67  ETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADELTENVKWISK 126

Query: 425 --------------------DDSKFKQAQRIRNPKHRLKKVLDACKNKTKCDGGDEIESQ 306
                               +D KFKQAQ+IRNPK+RLKK+LDACKNK+KC+GGDEIE+Q
Sbjct: 127 SKFANMKSLKLGHSLLHCKSEDHKFKQAQKIRNPKNRLKKILDACKNKSKCEGGDEIETQ 186

Query: 305 GQDLEEPVKKSRGGCGAQQPKITIDGMKMVAEYKAQRKKNDDTEQLPEPAERKQQLTAER 126
             D +EPVKKSRGGCGAQQPK+TI+GMKM+AEYK QRKKNDD EQLPEP ERKQQL+AER
Sbjct: 187 ALDSDEPVKKSRGGCGAQQPKLTIEGMKMIAEYKIQRKKNDDPEQLPEPVERKQQLSAER 246

Query: 125 VLSVLKRVTDEDCVLLGLDPKYARPDWMILQVLXXXXXPVR 3
           VL+VLKR++DEDC+LLGL+PKYARPDWMILQVL     PVR
Sbjct: 247 VLNVLKRISDEDCILLGLNPKYARPDWMILQVLPIPPPPVR 287