BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00013677
         (627 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containi...   261   7e-68
emb|CAN61725.1| hypothetical protein VITISV_032420 [Vitis vinifera]   261   1e-67
ref|XP_004166371.1| PREDICTED: pentatricopeptide repeat-containi...   248   8e-64
ref|XP_004137966.1| PREDICTED: pentatricopeptide repeat-containi...   248   8e-64
ref|XP_003625591.1| Pentatricopeptide repeat-containing protein ...   239   2e-61

>ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Vitis vinifera]
          Length = 755

 Score =  261 bits (667), Expect = 7e-68
 Identities = 124/204 (60%), Positives = 159/204 (77%)
 Frame = -2

Query: 623 VVKSEFGVALIPQNALVAMYTRFDRVENSWVVFDGISNKDLISWGSMIAGFAQQGREFEA 444
           V+KSEFG  +I QNAL++MYT+ + + ++  VF  ++ +DLISWGSMIAGF+Q G E EA
Sbjct: 190 VLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEA 249

Query: 443 LQLFKDMLSTGDFVPNEFIFGSVFSACSGILESGYGSQVHGLSVKYGLGKDVYAGCSLCD 264
           L  FK+ML  G ++PNEFIFGSVFSACS +L+  YG Q+HG+S+K+GLG+DV+AGCSLCD
Sbjct: 250 LCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCD 309

Query: 263 MYAKCGRLEFAKKAFSQIEKPDLVSWNAIIAGFAYSGNPNESMLLFSQMRVLGFVPDEIT 84
           MYAKCG L  A+  F QI +PDLV+WNAIIAGFAY G+  E++  FSQMR  G +PDEIT
Sbjct: 310 MYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEIT 369

Query: 83  IRCLLCSFTSSVTLHQGKQVHAYV 12
           +R LLC+ TS   L+QG QVH Y+
Sbjct: 370 VRSLLCACTSPSELYQGMQVHGYI 393



 Score =  115 bits (289), Expect = 5e-24
 Identities = 64/207 (30%), Positives = 117/207 (56%), Gaps = 1/207 (0%)
 Frame = -2

Query: 623 VVKSEFGVALIPQNALVAMYTRFDRVENSWVVFDGISNKDLISWGSMIAGFAQQGREFEA 444
           ++KS+    L  QN ++ MY +   ++++  VFD +  ++++SW S+IAG++Q G+   A
Sbjct: 89  MLKSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNA 148

Query: 443 LQLFKDMLSTGDFVPNEFIFGSVFSACSGILESGYGSQVHGLSVKYGLGKDVYAGCSLCD 264
           L+ +  ML +G  +P++F FGS+  ACS + + G G Q+H   +K   G  + A  +L  
Sbjct: 149 LEFYFQMLQSG-VMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALIS 207

Query: 263 MYAKCGRLEFAKKAFSQIEKPDLVSWNAIIAGFAYSGNPNESMLLFSQMRVLG-FVPDEI 87
           MY K   +  A   FS++   DL+SW ++IAGF+  G   E++  F +M   G ++P+E 
Sbjct: 208 MYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEF 267

Query: 86  TIRCLLCSFTSSVTLHQGKQVHAYVVR 6
               +  + +S +    G+Q+H   ++
Sbjct: 268 IFGSVFSACSSLLQPEYGRQLHGMSIK 294



 Score =  103 bits (256), Expect = 3e-20
 Identities = 68/193 (35%), Positives = 94/193 (48%), Gaps = 1/193 (0%)
 Frame = -2

Query: 581 ALVAMYTRFDRVENSWVVFDGISNKDLISWGSMIAGFAQQGREFEALQLFKDMLSTGDFV 402
           +L  MY +   +  + VVF  I   DL++W ++IAGFA  G   EA+  F  M   G  +
Sbjct: 306 SLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQG-LI 364

Query: 401 PNEFIFGSVFSACSGILESGYGSQVHGLSVKYGLGKDVYAGCSLCDMYAKCGRLEFAKKA 222
           P+E    S+  AC+   E   G QVHG   K GL  DV    +L  MYAKC  L  A   
Sbjct: 365 PDEITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFF 424

Query: 221 FSQIE-KPDLVSWNAIIAGFAYSGNPNESMLLFSQMRVLGFVPDEITIRCLLCSFTSSVT 45
           F ++    DLVSWNAI+          E   L   M +    PD IT+  +L +   +V+
Sbjct: 425 FEEMRCNADLVSWNAILTACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVS 484

Query: 44  LHQGKQVHAYVVR 6
           +  G QVH Y ++
Sbjct: 485 IEIGNQVHCYALK 497



 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 54/189 (28%), Positives = 97/189 (51%), Gaps = 1/189 (0%)
 Frame = -2

Query: 584 NALVAMYTRFDRVENSWVVFDGIS-NKDLISWGSMIAGFAQQGREFEALQLFKDMLSTGD 408
           N L+ MY +   + ++   F+ +  N DL+SW +++    +  +  E  +L K ++    
Sbjct: 406 NTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMRHDQAEEVFRLLK-LMCISQ 464

Query: 407 FVPNEFIFGSVFSACSGILESGYGSQVHGLSVKYGLGKDVYAGCSLCDMYAKCGRLEFAK 228
             P+     +V  A +  +    G+QVH  ++K GL  D      L D+YAKCG L+ A 
Sbjct: 465 HRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLNCDTSVTNGLIDLYAKCGSLKTAH 524

Query: 227 KAFSQIEKPDLVSWNAIIAGFAYSGNPNESMLLFSQMRVLGFVPDEITIRCLLCSFTSSV 48
           K F  +  PD+VSW+++I G+A  G   E++ LF  MR L   P+ +T   +L + +   
Sbjct: 525 KIFDSMINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTACSHVG 584

Query: 47  TLHQGKQVH 21
            + +G +++
Sbjct: 585 LVEEGWKLY 593



 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 55/182 (30%), Positives = 90/182 (49%), Gaps = 4/182 (2%)
 Frame = -2

Query: 584  NALVAMYTRFDRVENSWVVFDGISNKDLISWGSMIAGFAQQGREFEALQLFKDMLSTGDF 405
            N L+ +Y +   ++ +  +FD + N D++SW S+I G+AQ G   EAL+LFK M    D 
Sbjct: 508  NGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRL-DV 566

Query: 404  VPNEFIFGSVFSACS--GILESGYGSQVHGLSVK-YGLGKDVYAGCSLCDMYAKCGRLEF 234
             PN   F  V +ACS  G++E G+  +++G   K +G+         + D+ A+ G L  
Sbjct: 567  KPNHVTFVGVLTACSHVGLVEEGW--KLYGTMEKEFGIAPTREHCSCMVDLLARAGCLNE 624

Query: 233  AKKAFSQIE-KPDLVSWNAIIAGFAYSGNPNESMLLFSQMRVLGFVPDEITIRCLLCSFT 57
            A+    Q+   PD+V W  ++A     GN +      +   +L   P       LLC+  
Sbjct: 625  AEGFIHQMAFDPDIVVWKTLLAACKTHGNVDVGKR--AAENILKIDPSNSAAHVLLCNIY 682

Query: 56   SS 51
            +S
Sbjct: 683  AS 684



 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 39/148 (26%), Positives = 79/148 (53%)
 Frame = -2

Query: 449 EALQLFKDMLSTGDFVPNEFIFGSVFSACSGILESGYGSQVHGLSVKYGLGKDVYAGCSL 270
           EA++ F+ +     F      +  + SACS +    +G ++H   +K     D+     +
Sbjct: 45  EAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGKKIHDHMLKSKSHPDLTLQNHI 104

Query: 269 CDMYAKCGRLEFAKKAFSQIEKPDLVSWNAIIAGFAYSGNPNESMLLFSQMRVLGFVPDE 90
            +MY KC  L+ A+K F  + + ++VSW ++IAG++ +G    ++  + QM   G +PD+
Sbjct: 105 LNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQ 164

Query: 89  ITIRCLLCSFTSSVTLHQGKQVHAYVVR 6
            T   ++ + +S   +  G+Q+HA+V++
Sbjct: 165 FTFGSIIKACSSLGDIGLGRQLHAHVLK 192


>emb|CAN61725.1| hypothetical protein VITISV_032420 [Vitis vinifera]
          Length = 763

 Score =  261 bits (666), Expect = 1e-67
 Identities = 124/204 (60%), Positives = 159/204 (77%)
 Frame = -2

Query: 623 VVKSEFGVALIPQNALVAMYTRFDRVENSWVVFDGISNKDLISWGSMIAGFAQQGREFEA 444
           V+KSEFG  +I QNAL++MYT+ + + ++  VF  ++ +DLISWGSMIAGF+Q G E EA
Sbjct: 190 VLKSEFGAHIIAQNALISMYTKSNVIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEA 249

Query: 443 LQLFKDMLSTGDFVPNEFIFGSVFSACSGILESGYGSQVHGLSVKYGLGKDVYAGCSLCD 264
           L  FK+ML  G ++PNEFIFGSVFSACS +L+  YG Q+HG+S+K+GLG+DV+AGCSLCD
Sbjct: 250 LCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCD 309

Query: 263 MYAKCGRLEFAKKAFSQIEKPDLVSWNAIIAGFAYSGNPNESMLLFSQMRVLGFVPDEIT 84
           MYAKCG L  A+  F QI +PDLV+WNAIIAGFAY G+  E++  FSQMR  G +PDEIT
Sbjct: 310 MYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEIT 369

Query: 83  IRCLLCSFTSSVTLHQGKQVHAYV 12
           +R LLC+ TS   L+QG QVH Y+
Sbjct: 370 VRSLLCACTSPSELYQGMQVHGYI 393



 Score =  115 bits (288), Expect = 6e-24
 Identities = 64/207 (30%), Positives = 117/207 (56%), Gaps = 1/207 (0%)
 Frame = -2

Query: 623 VVKSEFGVALIPQNALVAMYTRFDRVENSWVVFDGISNKDLISWGSMIAGFAQQGREFEA 444
           ++KS+    L  QN ++ MY +   ++++  VFD +  ++++SW S+IAG++Q G+   A
Sbjct: 89  MLKSKSHPDLTLQNHILNMYGKCGSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNA 148

Query: 443 LQLFKDMLSTGDFVPNEFIFGSVFSACSGILESGYGSQVHGLSVKYGLGKDVYAGCSLCD 264
           L+ +  ML +G  +P++F FGS+  ACS + + G G Q+H   +K   G  + A  +L  
Sbjct: 149 LEFYFQMLQSG-VMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALIS 207

Query: 263 MYAKCGRLEFAKKAFSQIEKPDLVSWNAIIAGFAYSGNPNESMLLFSQMRVLG-FVPDEI 87
           MY K   +  A   FS++   DL+SW ++IAGF+  G   E++  F +M   G ++P+E 
Sbjct: 208 MYTKSNVIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEF 267

Query: 86  TIRCLLCSFTSSVTLHQGKQVHAYVVR 6
               +  + +S +    G+Q+H   ++
Sbjct: 268 IFGSVFSACSSLLQPEYGRQLHGMSIK 294



 Score =  103 bits (258), Expect = 2e-20
 Identities = 68/193 (35%), Positives = 95/193 (49%), Gaps = 1/193 (0%)
 Frame = -2

Query: 581 ALVAMYTRFDRVENSWVVFDGISNKDLISWGSMIAGFAQQGREFEALQLFKDMLSTGDFV 402
           +L  MY +   +  + VVF  I   DL++W ++IAGFA  G   EA+  F  M   G  +
Sbjct: 306 SLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQG-LI 364

Query: 401 PNEFIFGSVFSACSGILESGYGSQVHGLSVKYGLGKDVYAGCSLCDMYAKCGRLEFAKKA 222
           P+E    S+  AC+   E   G QVHG   K GL  DV    +L  MYAKC  L  A   
Sbjct: 365 PDEITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFF 424

Query: 221 FSQIE-KPDLVSWNAIIAGFAYSGNPNESMLLFSQMRVLGFVPDEITIRCLLCSFTSSVT 45
           F ++    DLVSWNAI+    +     E   L   M +    PD IT+  +L +   +V+
Sbjct: 425 FEEMRCNADLVSWNAILTACMHHDQAEEVFGLLKLMCISQHRPDYITLTNVLGASAETVS 484

Query: 44  LHQGKQVHAYVVR 6
           +  G QVH Y ++
Sbjct: 485 IEIGNQVHCYALK 497



 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 55/189 (29%), Positives = 97/189 (51%), Gaps = 1/189 (0%)
 Frame = -2

Query: 584 NALVAMYTRFDRVENSWVVFDGIS-NKDLISWGSMIAGFAQQGREFEALQLFKDMLSTGD 408
           N L+ MY +   + ++   F+ +  N DL+SW +++       +  E   L K ++    
Sbjct: 406 NTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMHHDQAEEVFGLLK-LMCISQ 464

Query: 407 FVPNEFIFGSVFSACSGILESGYGSQVHGLSVKYGLGKDVYAGCSLCDMYAKCGRLEFAK 228
             P+     +V  A +  +    G+QVH  ++K GL  D+     L D+YAKCG L+ A+
Sbjct: 465 HRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLNCDISVTNGLIDLYAKCGSLKTAR 524

Query: 227 KAFSQIEKPDLVSWNAIIAGFAYSGNPNESMLLFSQMRVLGFVPDEITIRCLLCSFTSSV 48
           K F  +  PD+VSW+++I G+A  G   E++ LF  MR L   P+ +T   +L + +   
Sbjct: 525 KIFDSVINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTACSHVG 584

Query: 47  TLHQGKQVH 21
            + +G Q++
Sbjct: 585 LVEEGWQLY 593



 Score = 77.0 bits (188), Expect = 3e-12
 Identities = 40/148 (27%), Positives = 80/148 (54%)
 Frame = -2

Query: 449 EALQLFKDMLSTGDFVPNEFIFGSVFSACSGILESGYGSQVHGLSVKYGLGKDVYAGCSL 270
           EA++ F+ +     F      +  + SACS +    +G ++H   +K     D+     +
Sbjct: 45  EAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGRKIHDHMLKSKSHPDLTLQNHI 104

Query: 269 CDMYAKCGRLEFAKKAFSQIEKPDLVSWNAIIAGFAYSGNPNESMLLFSQMRVLGFVPDE 90
            +MY KCG L+ A+K F  + + ++VSW ++IAG++ +G    ++  + QM   G +PD+
Sbjct: 105 LNMYGKCGSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQ 164

Query: 89  ITIRCLLCSFTSSVTLHQGKQVHAYVVR 6
            T   ++ + +S   +  G+Q+HA+V++
Sbjct: 165 FTFGSIIKACSSLGDIGLGRQLHAHVLK 192



 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 47/142 (33%), Positives = 78/142 (54%), Gaps = 4/142 (2%)
 Frame = -2

Query: 584 NALVAMYTRFDRVENSWVVFDGISNKDLISWGSMIAGFAQQGREFEALQLFKDMLSTGDF 405
           N L+ +Y +   ++ +  +FD + N D++SW S+I G+AQ G   EAL+LFK M    D 
Sbjct: 508 NGLIDLYAKCGSLKTARKIFDSVINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRL-DV 566

Query: 404 VPNEFIFGSVFSACS--GILESGYGSQVHG-LSVKYGLGKDVYAGCSLCDMYAKCGRLEF 234
            PN   F  V +ACS  G++E G+  Q++G +  ++G+         + D+ A+ G L  
Sbjct: 567 KPNHVTFVGVLTACSHVGLVEEGW--QLYGTMEKEFGIVPTREHCSCMVDLLARAGCLNE 624

Query: 233 AKKAFSQIE-KPDLVSWNAIIA 171
           A+    Q+   PD+V W  ++A
Sbjct: 625 AEAFIHQMAFDPDIVVWKTLLA 646


>ref|XP_004166371.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Cucumis sativus]
          Length = 792

 Score =  248 bits (632), Expect = 8e-64
 Identities = 122/206 (59%), Positives = 153/206 (74%)
 Frame = -2

Query: 623 VVKSEFGVALIPQNALVAMYTRFDRVENSWVVFDGISNKDLISWGSMIAGFAQQGREFEA 444
           V+KSEFG  LI QNAL++MYT+F ++ ++  VF  I  KDLISWGSMIAGF+Q G E EA
Sbjct: 225 VLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELEA 284

Query: 443 LQLFKDMLSTGDFVPNEFIFGSVFSACSGILESGYGSQVHGLSVKYGLGKDVYAGCSLCD 264
           L  F++MLS   + PNEF+FGS FSACS +LE   G Q+HGL +K+GLG D++AGCSLCD
Sbjct: 285 LCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCD 344

Query: 263 MYAKCGRLEFAKKAFSQIEKPDLVSWNAIIAGFAYSGNPNESMLLFSQMRVLGFVPDEIT 84
           MYAKCG LE A+  F  IEKPDLV+WNAIIAGFA   N  ES   FSQMR  G VP+++T
Sbjct: 345 MYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVT 404

Query: 83  IRCLLCSFTSSVTLHQGKQVHAYVVR 6
           +  LLC+ +  V L+ G QVH+Y+V+
Sbjct: 405 VLSLLCACSEPVMLNHGIQVHSYIVK 430



 Score =  117 bits (292), Expect = 2e-24
 Identities = 66/202 (32%), Positives = 113/202 (55%), Gaps = 1/202 (0%)
 Frame = -2

Query: 623  VVKSEFGVALIPQNALVAMYTRFDRVENSWVVFDGISNK-DLISWGSMIAGFAQQGREFE 447
            +VK  F + +   N+L++MY++   + ++  VF+ I NK D++SW +++    QQ +  E
Sbjct: 428  IVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGE 487

Query: 446  ALQLFKDMLSTGDFVPNEFIFGSVFSACSGILESGYGSQVHGLSVKYGLGKDVYAGCSLC 267
             L+L K M ++    P+     +V  +   I     GSQ+H   +K GL  D+    +L 
Sbjct: 488  VLRLTKLMFASR-IKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNALI 546

Query: 266  DMYAKCGRLEFAKKAFSQIEKPDLVSWNAIIAGFAYSGNPNESMLLFSQMRVLGFVPDEI 87
            +MY KCG LE A+K F  I  PD++SW+++I G+A +G   E+  LF  MR LG  P+EI
Sbjct: 547  NMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEI 606

Query: 86   TIRCLLCSFTSSVTLHQGKQVH 21
            T   +L + +    + +G +++
Sbjct: 607  TFVGILTACSHIGMVEEGLKLY 628



 Score =  107 bits (267), Expect = 2e-21
 Identities = 60/198 (30%), Positives = 109/198 (55%), Gaps = 1/198 (0%)
 Frame = -2

Query: 596 LIPQNALVAMYTRFDRVENSWVVFDGISNKDLISWGSMIAGFAQQGREFEALQLFKDMLS 417
           +I QN +++MY +   ++ +  +FD +  K+++SW SMI+G+++ G E  A+ L+  ML 
Sbjct: 133 MILQNHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLR 192

Query: 416 TGDFVPNEFIFGSVFSACSGILESGYGSQVHGLSVKYGLGKDVYAGCSLCDMYAKCGRLE 237
           +G  +P+ F FGS+  +CSG+ +     Q+H   +K   G D+ A  +L  MY K  ++ 
Sbjct: 193 SGH-IPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMA 251

Query: 236 FAKKAFSQIEKPDLVSWNAIIAGFAYSGNPNESMLLFSQMRVLG-FVPDEITIRCLLCSF 60
            A   FS+I   DL+SW ++IAGF+  G   E++  F +M     + P+E        + 
Sbjct: 252 DAINVFSRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSAC 311

Query: 59  TSSVTLHQGKQVHAYVVR 6
           +  +    G+Q+H   ++
Sbjct: 312 SKLLEPDCGRQIHGLCIK 329



 Score =  105 bits (261), Expect = 9e-21
 Identities = 65/206 (31%), Positives = 96/206 (46%), Gaps = 1/206 (0%)
 Frame = -2

Query: 620 VKSEFGVALIPQNALVAMYTRFDRVENSWVVFDGISNKDLISWGSMIAGFAQQGREFEAL 441
           +K   G  L    +L  MY +   +E++  VF  I   DL++W ++IAGFA      E+ 
Sbjct: 328 IKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESS 387

Query: 440 QLFKDMLSTGDFVPNEFIFGSVFSACSGILESGYGSQVHGLSVKYGLGKDVYAGCSLCDM 261
             F  M  TG  VPN+    S+  ACS  +   +G QVH   VK G   D+    SL  M
Sbjct: 388 SFFSQMRHTG-LVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSM 446

Query: 260 YAKCGRLEFAKKAFSQI-EKPDLVSWNAIIAGFAYSGNPNESMLLFSQMRVLGFVPDEIT 84
           Y+KC  L  A + F  I  K D+VSWN ++          E + L   M      PD +T
Sbjct: 447 YSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVT 506

Query: 83  IRCLLCSFTSSVTLHQGKQVHAYVVR 6
           +  +L S     +   G Q+H ++++
Sbjct: 507 LTNVLVSSGQIASYEVGSQIHCFIMK 532



 Score = 83.2 bits (204), Expect = 4e-14
 Identities = 53/161 (32%), Positives = 82/161 (50%), Gaps = 3/161 (1%)
 Frame = -2

Query: 623  VVKSEFGVALIPQNALVAMYTRFDRVENSWVVFDGISNKDLISWGSMIAGFAQQGREFEA 444
            ++KS   + +   NAL+ MYT+   +E +  +FD I N D+ISW S+I G+AQ G   EA
Sbjct: 530  IMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCGKEA 589

Query: 443  LQLFKDMLSTGDFVPNEFIFGSVFSACS--GILESGYGSQVHGLSVKYGLGKDVYAGCSL 270
             +LF+ M   G   PNE  F  + +ACS  G++E G       +   Y +         +
Sbjct: 590  FELFRTMRGLG-VKPNEITFVGILTACSHIGMVEEGL-KLYRTMQEDYRISPTKEHCSCM 647

Query: 269  CDMYAKCGRLEFAKKAFSQIE-KPDLVSWNAIIAGFAYSGN 150
             D+ A+ G L+ A+    Q+   PD+V W  ++A     GN
Sbjct: 648  VDLLARAGCLDVAEDFIRQMPFVPDVVVWKTLLAACKVHGN 688



 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 36/148 (24%), Positives = 70/148 (47%)
 Frame = -2

Query: 449 EALQLFKDMLSTGDFVPNEFIFGSVFSACSGILESGYGSQVHGLSVKYGLGKDVYAGCSL 270
           EAL+ F               +  + +ACS +    +G ++H   +      D+     +
Sbjct: 80  EALKAFDIFQKCSSSPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHI 139

Query: 269 CDMYAKCGRLEFAKKAFSQIEKPDLVSWNAIIAGFAYSGNPNESMLLFSQMRVLGFVPDE 90
             MY KCG L+ A+  F  +   ++VSW ++I+G++  G  + ++ L+ QM   G +PD 
Sbjct: 140 LSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDH 199

Query: 89  ITIRCLLCSFTSSVTLHQGKQVHAYVVR 6
            T   ++ S +        +Q+HA+V++
Sbjct: 200 FTFGSIVKSCSGLDDFKLARQLHAHVLK 227


>ref|XP_004137966.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Cucumis sativus]
          Length = 792

 Score =  248 bits (632), Expect = 8e-64
 Identities = 122/206 (59%), Positives = 153/206 (74%)
 Frame = -2

Query: 623 VVKSEFGVALIPQNALVAMYTRFDRVENSWVVFDGISNKDLISWGSMIAGFAQQGREFEA 444
           V+KSEFG  LI QNAL++MYT+F ++ ++  VF  I  KDLISWGSMIAGF+Q G E EA
Sbjct: 225 VLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELEA 284

Query: 443 LQLFKDMLSTGDFVPNEFIFGSVFSACSGILESGYGSQVHGLSVKYGLGKDVYAGCSLCD 264
           L  F++MLS   + PNEF+FGS FSACS +LE   G Q+HGL +K+GLG D++AGCSLCD
Sbjct: 285 LCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCD 344

Query: 263 MYAKCGRLEFAKKAFSQIEKPDLVSWNAIIAGFAYSGNPNESMLLFSQMRVLGFVPDEIT 84
           MYAKCG LE A+  F  IEKPDLV+WNAIIAGFA   N  ES   FSQMR  G VP+++T
Sbjct: 345 MYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVT 404

Query: 83  IRCLLCSFTSSVTLHQGKQVHAYVVR 6
           +  LLC+ +  V L+ G QVH+Y+V+
Sbjct: 405 VLSLLCACSEPVMLNHGIQVHSYIVK 430



 Score =  117 bits (292), Expect = 2e-24
 Identities = 66/202 (32%), Positives = 113/202 (55%), Gaps = 1/202 (0%)
 Frame = -2

Query: 623  VVKSEFGVALIPQNALVAMYTRFDRVENSWVVFDGISNK-DLISWGSMIAGFAQQGREFE 447
            +VK  F + +   N+L++MY++   + ++  VF+ I NK D++SW +++    QQ +  E
Sbjct: 428  IVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGE 487

Query: 446  ALQLFKDMLSTGDFVPNEFIFGSVFSACSGILESGYGSQVHGLSVKYGLGKDVYAGCSLC 267
             L+L K M ++    P+     +V  +   I     GSQ+H   +K GL  D+    +L 
Sbjct: 488  VLRLTKLMFASR-IKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNALI 546

Query: 266  DMYAKCGRLEFAKKAFSQIEKPDLVSWNAIIAGFAYSGNPNESMLLFSQMRVLGFVPDEI 87
            +MY KCG LE A+K F  I  PD++SW+++I G+A +G   E+  LF  MR LG  P+EI
Sbjct: 547  NMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEI 606

Query: 86   TIRCLLCSFTSSVTLHQGKQVH 21
            T   +L + +    + +G +++
Sbjct: 607  TFVGILTACSHIGMVEEGLKLY 628



 Score =  107 bits (267), Expect = 2e-21
 Identities = 60/198 (30%), Positives = 109/198 (55%), Gaps = 1/198 (0%)
 Frame = -2

Query: 596 LIPQNALVAMYTRFDRVENSWVVFDGISNKDLISWGSMIAGFAQQGREFEALQLFKDMLS 417
           +I QN +++MY +   ++ +  +FD +  K+++SW SMI+G+++ G E  A+ L+  ML 
Sbjct: 133 MILQNHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLR 192

Query: 416 TGDFVPNEFIFGSVFSACSGILESGYGSQVHGLSVKYGLGKDVYAGCSLCDMYAKCGRLE 237
           +G  +P+ F FGS+  +CSG+ +     Q+H   +K   G D+ A  +L  MY K  ++ 
Sbjct: 193 SGH-IPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMA 251

Query: 236 FAKKAFSQIEKPDLVSWNAIIAGFAYSGNPNESMLLFSQMRVLG-FVPDEITIRCLLCSF 60
            A   FS+I   DL+SW ++IAGF+  G   E++  F +M     + P+E        + 
Sbjct: 252 DAINVFSRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSAC 311

Query: 59  TSSVTLHQGKQVHAYVVR 6
           +  +    G+Q+H   ++
Sbjct: 312 SKLLEPDCGRQIHGLCIK 329



 Score =  105 bits (261), Expect = 9e-21
 Identities = 65/206 (31%), Positives = 96/206 (46%), Gaps = 1/206 (0%)
 Frame = -2

Query: 620 VKSEFGVALIPQNALVAMYTRFDRVENSWVVFDGISNKDLISWGSMIAGFAQQGREFEAL 441
           +K   G  L    +L  MY +   +E++  VF  I   DL++W ++IAGFA      E+ 
Sbjct: 328 IKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESS 387

Query: 440 QLFKDMLSTGDFVPNEFIFGSVFSACSGILESGYGSQVHGLSVKYGLGKDVYAGCSLCDM 261
             F  M  TG  VPN+    S+  ACS  +   +G QVH   VK G   D+    SL  M
Sbjct: 388 SFFSQMRHTG-LVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSM 446

Query: 260 YAKCGRLEFAKKAFSQI-EKPDLVSWNAIIAGFAYSGNPNESMLLFSQMRVLGFVPDEIT 84
           Y+KC  L  A + F  I  K D+VSWN ++          E + L   M      PD +T
Sbjct: 447 YSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVT 506

Query: 83  IRCLLCSFTSSVTLHQGKQVHAYVVR 6
           +  +L S     +   G Q+H ++++
Sbjct: 507 LTNVLVSSGQIASYEVGSQIHCFIMK 532



 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 53/161 (32%), Positives = 82/161 (50%), Gaps = 3/161 (1%)
 Frame = -2

Query: 623  VVKSEFGVALIPQNALVAMYTRFDRVENSWVVFDGISNKDLISWGSMIAGFAQQGREFEA 444
            ++KS   + +   NAL+ MYT+   +E +  +FD I N D+ISW S+I G+AQ G   EA
Sbjct: 530  IMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCGKEA 589

Query: 443  LQLFKDMLSTGDFVPNEFIFGSVFSACS--GILESGYGSQVHGLSVKYGLGKDVYAGCSL 270
             +LF+ M   G   PNE  F  + +ACS  G++E G       +   Y +         +
Sbjct: 590  FELFRTMRGLG-VKPNEITFVGILTACSHIGMVEEGL-KLYRTMQEDYRISPTKEHCSCM 647

Query: 269  CDMYAKCGRLEFAKKAFSQIE-KPDLVSWNAIIAGFAYSGN 150
             D+ A+ G L+ A+    Q+   PD+V W  ++A     GN
Sbjct: 648  VDLLARAGCLDVAEDFIKQMPFVPDVVVWKTLLAACKVHGN 688



 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 36/148 (24%), Positives = 70/148 (47%)
 Frame = -2

Query: 449 EALQLFKDMLSTGDFVPNEFIFGSVFSACSGILESGYGSQVHGLSVKYGLGKDVYAGCSL 270
           EAL+ F               +  + +ACS +    +G ++H   +      D+     +
Sbjct: 80  EALKAFDIFQKCSSSPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHI 139

Query: 269 CDMYAKCGRLEFAKKAFSQIEKPDLVSWNAIIAGFAYSGNPNESMLLFSQMRVLGFVPDE 90
             MY KCG L+ A+  F  +   ++VSW ++I+G++  G  + ++ L+ QM   G +PD 
Sbjct: 140 LSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDH 199

Query: 89  ITIRCLLCSFTSSVTLHQGKQVHAYVVR 6
            T   ++ S +        +Q+HA+V++
Sbjct: 200 FTFGSIVKSCSGLDDFKLARQLHAHVLK 227


>ref|XP_003625591.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355500606|gb|AES81809.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 887

 Score =  239 bits (611), Expect = 2e-61
 Identities = 119/206 (57%), Positives = 151/206 (73%)
 Frame = -2

Query: 623 VVKSEFGVALIPQNALVAMYTRFDRVENSWVVFDGISNKDLISWGSMIAGFAQQGREFEA 444
           V+KS FG  L  QNAL++MYT F ++E++  VF  I  KDLISWG+MI G+ Q G   EA
Sbjct: 286 VIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLGYRVEA 345

Query: 443 LQLFKDMLSTGDFVPNEFIFGSVFSACSGILESGYGSQVHGLSVKYGLGKDVYAGCSLCD 264
           L LF+D+L  G + PNEFIFGSVFSACS +LE  YG QVHG+ VK+GL ++V+AGCSLCD
Sbjct: 346 LYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRRNVFAGCSLCD 405

Query: 263 MYAKCGRLEFAKKAFSQIEKPDLVSWNAIIAGFAYSGNPNESMLLFSQMRVLGFVPDEIT 84
           MYAK G L  AK AF QI+ PD+VSWNAIIA FA +G+ NE++  F QM  +G  PD IT
Sbjct: 406 MYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSIT 465

Query: 83  IRCLLCSFTSSVTLHQGKQVHAYVVR 6
              LLC+  S V L+QG+Q+H+Y+V+
Sbjct: 466 YISLLCTCGSPVRLNQGRQIHSYIVK 491



 Score =  115 bits (287), Expect = 8e-24
 Identities = 64/181 (35%), Positives = 105/181 (58%), Gaps = 1/181 (0%)
 Frame = -2

Query: 623  VVKSEFGVALIPQNALVAMYTRFDRVENSWVVFDGIS-NKDLISWGSMIAGFAQQGREFE 447
            +VK  F   +   N+L+ MYT+   + ++  VF  IS N +L+SW ++++   Q+ +E E
Sbjct: 489  IVKIGFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQEGE 548

Query: 446  ALQLFKDMLSTGDFVPNEFIFGSVFSACSGILESGYGSQVHGLSVKYGLGKDVYAGCSLC 267
              +L+K+M  +G+  P+     ++   C+ +   G G+QVH  S+K GL  DV     L 
Sbjct: 549  TFRLYKEMHFSGN-KPDSITITTLLGTCAELTSLGVGNQVHCYSIKSGLILDVSVCNGLI 607

Query: 266  DMYAKCGRLEFAKKAFSQIEKPDLVSWNAIIAGFAYSGNPNESMLLFSQMRVLGFVPDEI 87
            DMYAKCG L+ A+  F   +  D+VSW+++I G+A  G  +E++ LF  M  LG  P+E+
Sbjct: 608  DMYAKCGSLKHARDVFDSTQNLDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLGVQPNEV 667

Query: 86   T 84
            T
Sbjct: 668  T 668



 Score =  113 bits (283), Expect = 2e-23
 Identities = 64/207 (30%), Positives = 113/207 (54%), Gaps = 1/207 (0%)
 Frame = -2

Query: 623 VVKSEFGVALIPQNALVAMYTRFDRVENSWVVFDGISNKDLISWGSMIAGFAQQGREFEA 444
           V+KS +  ++I QN ++ MY +   ++++  VFD +   +++SW SMI+G++Q G+  +A
Sbjct: 185 VLKSNYQPSIILQNHMINMYGKCGSMKDARKVFDTMQLPNVVSWTSMISGYSQNGQANDA 244

Query: 443 LQLFKDMLSTGDFVPNEFIFGSVFSACSGILESGYGSQVHGLSVKYGLGKDVYAGCSLCD 264
           + ++  M  +G F P++  FGSV  AC    +   G Q+H   +K   G  + +  +L  
Sbjct: 245 IIMYIQMTRSGQF-PDQLTFGSVIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALIS 303

Query: 263 MYAKCGRLEFAKKAFSQIEKPDLVSWNAIIAGFAYSGNPNESMLLFSQMRVLG-FVPDEI 87
           MY   G++E A   F++I   DL+SW  +I G+   G   E++ LF  +   G + P+E 
Sbjct: 304 MYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEF 363

Query: 86  TIRCLLCSFTSSVTLHQGKQVHAYVVR 6
               +  + +S + L  GKQVH   V+
Sbjct: 364 IFGSVFSACSSLLELEYGKQVHGMCVK 390



 Score =  113 bits (282), Expect = 3e-23
 Identities = 64/193 (33%), Positives = 95/193 (49%), Gaps = 1/193 (0%)
 Frame = -2

Query: 581 ALVAMYTRFDRVENSWVVFDGISNKDLISWGSMIAGFAQQGREFEALQLFKDMLSTGDFV 402
           +L  MY +F  + ++ + F  I N D++SW ++IA FA  G   EA+  F+ M+  G   
Sbjct: 402 SLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQMIHIG-LT 460

Query: 401 PNEFIFGSVFSACSGILESGYGSQVHGLSVKYGLGKDVYAGCSLCDMYAKCGRLEFAKKA 222
           P+   + S+   C   +    G Q+H   VK G  K++    SL  MY KC  L  A   
Sbjct: 461 PDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNV 520

Query: 221 FSQIEK-PDLVSWNAIIAGFAYSGNPNESMLLFSQMRVLGFVPDEITIRCLLCSFTSSVT 45
           F  I +  +LVSWNAI++         E+  L+ +M   G  PD ITI  LL +     +
Sbjct: 521 FRDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLGTCAELTS 580

Query: 44  LHQGKQVHAYVVR 6
           L  G QVH Y ++
Sbjct: 581 LGVGNQVHCYSIK 593



 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 46/177 (25%), Positives = 93/177 (52%), Gaps = 2/177 (1%)
 Frame = -2

Query: 530 VFDGISNKDLISWGSMIAGFAQQGREFEALQLFKDML--STGDFVPNEFIFGSVFSACSG 357
           +F  +S +  +   S I    +Q    EAL+ F   L  S   F P+ +   S+  AC+ 
Sbjct: 116 IFSNLSKE--LPTNSYIIFLCKQHHYKEALEAFDFHLKNSNSHFEPSTYT--SLVLACAN 171

Query: 356 ILESGYGSQVHGLSVKYGLGKDVYAGCSLCDMYAKCGRLEFAKKAFSQIEKPDLVSWNAI 177
                Y  ++H   +K      +     + +MY KCG ++ A+K F  ++ P++VSW ++
Sbjct: 172 FRSLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDARKVFDTMQLPNVVSWTSM 231

Query: 176 IAGFAYSGNPNESMLLFSQMRVLGFVPDEITIRCLLCSFTSSVTLHQGKQVHAYVVR 6
           I+G++ +G  N++++++ QM   G  PD++T   ++ +   +  +  G+Q+HA+V++
Sbjct: 232 ISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLGRQLHAHVIK 288