BLASTX nr result
ID: Aconitum21_contig00013603
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Aconitum21_contig00013603
(2555 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275560.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vit... 1040 0.0
emb|CBI26575.3| unnamed protein product [Vitis vinifera] 1003 0.0
ref|XP_002519992.1| 5'->3' exoribonuclease, putative [Ricinus co... 907 0.0
emb|CAN59715.1| hypothetical protein VITISV_006076 [Vitis vinifera] 798 0.0
ref|NP_199069.1| 5'-3' exoribonuclease 2 [Arabidopsis thaliana] ... 775 0.0
>ref|XP_002275560.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vitis vinifera]
Length = 834
Score = 1040 bits (2690), Expect = 0.0
Identities = 522/788 (66%), Positives = 606/788 (76%), Gaps = 14/788 (1%)
Frame = +2
Query: 14 MGIPSFYRWLVERYPRAVEDVIEASPRVINGVKVPIDSSQPNPNGIEFDNLYIDMNGIIH 193
MGIP+FYRWL +RYP AV + +E P V+NGV V +D+++PNPNG EFDNLY+DMNGIIH
Sbjct: 1 MGIPAFYRWLADRYPLAVVNAVEDRPAVVNGVSVAVDTTRPNPNGNEFDNLYLDMNGIIH 60
Query: 194 PCFHPEGQPAPKSYEEVFRNVFSYIDRMFSMIRPRKLLYMAIDGVAPRAKMNQQXXXXXX 373
PCFHPEG PAPK+Y +VF+ VF YIDR+FS++RPRKLLYMAIDGVAPRAKMNQQ
Sbjct: 61 PCFHPEGLPAPKTYTDVFKAVFKYIDRIFSLVRPRKLLYMAIDGVAPRAKMNQQRARRFR 120
Query: 374 XXXXXXXXXX-------VFESEGATLSALD-SKDLDSNVITPGTEFMASLSSALQYYIHL 529
VFESE L+ LD +K LDSNVITPGTEFMA LSSAL+YYIHL
Sbjct: 121 AAKEAADDASGTERLKTVFESEMEMLALLDQTKKLDSNVITPGTEFMALLSSALKYYIHL 180
Query: 530 RLNTDPGWCGVKVILSDASVVGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLA 709
R+N DPGW G+KVILSDA+V GEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLA
Sbjct: 181 RMNLDPGWRGIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLA 240
Query: 710 LATHEIHFSILREDVSKVHQNTKNSKLGNGSMPKCQLDRKKELKLGQVGAEDYISRQKFQ 889
LATHEIHFSILREDV K ++ KN+K S+ + + K+ ++G ED+ISRQKFQ
Sbjct: 241 LATHEIHFSILREDVHKAYRKDKNNKPRKDSLLVNKRGKSKQGEVGGEDIEDFISRQKFQ 300
Query: 890 FFNVWVLRDYLAHDMKIPNPTVKTDLERLLDDFVFMCLLVGNDFLPHVPSLEISEGGIDL 1069
F N+W LRDYLAHDM IP+ ++KTDLERL+DDFVFMCL VGNDFLPH+PSLEISEG IDL
Sbjct: 301 FLNIWTLRDYLAHDMSIPDRSLKTDLERLIDDFVFMCLFVGNDFLPHMPSLEISEGAIDL 360
Query: 1070 LMTVYKKEFVQMGGYLTDSSKVNLKHVEHFLQALGVHEGAIFRRRSQVQKEKDKRF---- 1237
LMTVYKKEFVQ+GGYLT+SS+V L+ VE F+Q +G HE AIFR+RSQVQK++ RF
Sbjct: 361 LMTVYKKEFVQIGGYLTNSSEVYLERVERFMQVVGSHENAIFRKRSQVQKKRGVRFQGSS 420
Query: 1238 GKANGGVQSLRLSGKKSSKTFWSSVDLIPDST--LPSSSTFGAKESQSLMNSATPDGSNG 1411
K S + T S L P T S KE Q N + G+N
Sbjct: 421 NKKTVSDYSTTPCVEPQGMTGSSGSSLEPRKTPFCQDSKNSTVKEIQCSTNCIST-GANS 479
Query: 1412 TVDNIKLGEEGWKERYYAEKFEAMTDNERDKIRKHAVLKYIEGMCWVMHYYYEGVCSWQW 1591
VD IKLGE+GWKER+Y EKFEA T+++R+++R+HAVLKYIEG+CWVMHYYY+GVCSWQW
Sbjct: 480 LVDKIKLGEDGWKERFYVEKFEAKTEDDRERVRRHAVLKYIEGICWVMHYYYQGVCSWQW 539
Query: 1592 FYPYHYAPFASDFLDLELSDIQFTPGKPFKPLDQLMAVLPAASAHALPSCYRELMTDSSS 1771
FYPYHYAPFASD L+ DIQFT GKPFKP DQLM VLPAASAHALP YR+LM D +S
Sbjct: 540 FYPYHYAPFASDIYGLDQLDIQFTLGKPFKPFDQLMGVLPAASAHALPLYYRKLMMDETS 599
Query: 1772 PILEFYPNDFELDMNGKRFEWQAICKLPFIKESQLLAEIAKVEHTLTDEERRRNSLGMDI 1951
PIL+FYP DFELDMNGKR+ WQAICKLPFIKES+LLAEIAKVE TLTD+E+ RN LGMD
Sbjct: 600 PILDFYPADFELDMNGKRYPWQAICKLPFIKESRLLAEIAKVESTLTDKEKLRNRLGMDA 659
Query: 1952 LFLHVSHPLAGEILIFYGRNKDHPKLAKAKVKREIDPKFSGGMNGFMYISDRPVWPPEIC 2131
LF+H+S PLA +I FY R KDHPKL AKVKR+IDPKFSGGMNG+MYISDRPVWP E
Sbjct: 660 LFIHISDPLAVKIFSFYKRKKDHPKLPMAKVKRKIDPKFSGGMNGYMYISDRPVWPAEFY 719
Query: 2132 SSICDMEKITMNKVISVFYKYPTSHPHIPRPPEGIVIPRTLVKKEDILPVLGMWHDTSAV 2311
S I DME I NKVIS+FYK P+ HPHIPRP EG+++P V K +L +WH+TSAV
Sbjct: 720 SPIEDMEMIAQNKVISIFYKCPSFHPHIPRPLEGVILPGKTVIKPHLLRPPVLWHETSAV 779
Query: 2312 RARVDSKK 2335
R S++
Sbjct: 780 CGRKFSER 787
>emb|CBI26575.3| unnamed protein product [Vitis vinifera]
Length = 845
Score = 1003 bits (2592), Expect = 0.0
Identities = 511/788 (64%), Positives = 590/788 (74%), Gaps = 14/788 (1%)
Frame = +2
Query: 14 MGIPSFYRWLVERYPRAVEDVIEASPRVINGVKVPIDSSQPNPNGIEFDNLYIDMNGIIH 193
MGIP+FYRWL +RYP AV + +E P V FDNLY+DMNGIIH
Sbjct: 1 MGIPAFYRWLADRYPLAVVNAVEDRPAV-------------------FDNLYLDMNGIIH 41
Query: 194 PCFHPEGQPAPKSYEEVFRNVFSYIDRMFSMIRPRKLLYMAIDGVAPRAKMNQQXXXXXX 373
PCFHPEG PAPK+Y +VF+ VF YIDR+FS++RPRKLLYMAIDGVAPRAKMNQQ
Sbjct: 42 PCFHPEGLPAPKTYTDVFKAVFKYIDRIFSLVRPRKLLYMAIDGVAPRAKMNQQRARRFR 101
Query: 374 XXXXXXXXXX-------VFESEGATLSALD-SKDLDSNVITPGTEFMASLSSALQYYIHL 529
VFESE L+ LD +K LDSNVITPGTEFMA LSSAL+YYIHL
Sbjct: 102 AAKEAADDASGTERLKTVFESEMEMLALLDQTKKLDSNVITPGTEFMALLSSALKYYIHL 161
Query: 530 RLNTDPGWCGVKVILSDASVVGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLA 709
R+N DPGW G+KVILSDA+V GEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLA
Sbjct: 162 RMNLDPGWRGIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLA 221
Query: 710 LATHEIHFSILREDVSKVHQNTKNSKLGNGSMPKCQLDRKKELKLGQVGAEDYISRQKFQ 889
LATHEIHFSILREDV K ++ KN+K S+ + + K+ ++G ED+ISRQKFQ
Sbjct: 222 LATHEIHFSILREDVHKAYRKDKNNKPRKDSLLVNKRGKSKQGEVGGEDIEDFISRQKFQ 281
Query: 890 FFNVWVLRDYLAHDMKIPNPTVKTDLERLLDDFVFMCLLVGNDFLPHVPSLEISEGGIDL 1069
F N+W LRDYLAHDM IP+ ++KTDLERL+DDFVFMCL VGNDFLPH+PSLEISEG IDL
Sbjct: 282 FLNIWTLRDYLAHDMSIPDRSLKTDLERLIDDFVFMCLFVGNDFLPHMPSLEISEGAIDL 341
Query: 1070 LMTVYKKEFVQMGGYLTDSSKVNLKHVEHFLQALGVHEGAIFRRRSQVQKEKDKRF---- 1237
LMTVYKKEFVQ+GGYLT+SS+V L+ VE F+Q +G HE AIFR+RSQVQK++ RF
Sbjct: 342 LMTVYKKEFVQIGGYLTNSSEVYLERVERFMQVVGSHENAIFRKRSQVQKKRGVRFQGSS 401
Query: 1238 GKANGGVQSLRLSGKKSSKTFWSSVDLIPDST--LPSSSTFGAKESQSLMNSATPDGSNG 1411
K S + T S L P T S KE Q N + G+N
Sbjct: 402 NKKTVSDYSTTPCVEPQGMTGSSGSSLEPRKTPFCQDSKNSTVKEIQCSTNCIST-GANS 460
Query: 1412 TVDNIKLGEEGWKERYYAEKFEAMTDNERDKIRKHAVLKYIEGMCWVMHYYYEGVCSWQW 1591
VD IKLGE+GWKER+Y EKFEA T+++R+++R+HAVLKYIEG+CWVMHYYY+GVCSWQW
Sbjct: 461 LVDKIKLGEDGWKERFYVEKFEAKTEDDRERVRRHAVLKYIEGICWVMHYYYQGVCSWQW 520
Query: 1592 FYPYHYAPFASDFLDLELSDIQFTPGKPFKPLDQLMAVLPAASAHALPSCYRELMTDSSS 1771
FYPYHYAPFASD L+ DIQFT GKPFKP DQLM VLPAASAHALP YR+LM D +S
Sbjct: 521 FYPYHYAPFASDIYGLDQLDIQFTLGKPFKPFDQLMGVLPAASAHALPLYYRKLMMDETS 580
Query: 1772 PILEFYPNDFELDMNGKRFEWQAICKLPFIKESQLLAEIAKVEHTLTDEERRRNSLGMDI 1951
PIL+FYP DFELDMNGKR+ WQAICKLPFIKES+LLAEIAKVE TLTD+E+ RN LGMD
Sbjct: 581 PILDFYPADFELDMNGKRYPWQAICKLPFIKESRLLAEIAKVESTLTDKEKLRNRLGMDA 640
Query: 1952 LFLHVSHPLAGEILIFYGRNKDHPKLAKAKVKREIDPKFSGGMNGFMYISDRPVWPPEIC 2131
LF+H+S PLA +I FY R KDHPKL AKVKR+IDPKFSGGMNG+MYISDRPVWP E
Sbjct: 641 LFIHISDPLAVKIFSFYKRKKDHPKLPMAKVKRKIDPKFSGGMNGYMYISDRPVWPAEFY 700
Query: 2132 SSICDMEKITMNKVISVFYKYPTSHPHIPRPPEGIVIPRTLVKKEDILPVLGMWHDTSAV 2311
S I DME I NKVIS+FYK P+ HPHIPRP EG+++P V K +L +WH+TSAV
Sbjct: 701 SPIEDMEMIAQNKVISIFYKCPSFHPHIPRPLEGVILPGKTVIKPHLLRPPVLWHETSAV 760
Query: 2312 RARVDSKK 2335
R S++
Sbjct: 761 CGRKFSER 768
>ref|XP_002519992.1| 5'->3' exoribonuclease, putative [Ricinus communis]
gi|223540756|gb|EEF42316.1| 5'->3' exoribonuclease,
putative [Ricinus communis]
Length = 1545
Score = 907 bits (2345), Expect = 0.0
Identities = 469/822 (57%), Positives = 587/822 (71%), Gaps = 6/822 (0%)
Frame = +2
Query: 14 MGIPSFYRWLVERYPRAVEDVIEASPRVINGVKVPIDSSQPNPNGIEFDNLYIDMNGIIH 193
MGIPSFY+WL E+YP V DVIEA R+ NGV +PI+++ PNPNGIEFDNLY+DMNGIIH
Sbjct: 1 MGIPSFYKWLTEKYPDTVVDVIEARRRMGNGVLLPINTALPNPNGIEFDNLYLDMNGIIH 60
Query: 194 PCFHPEGQPAPKSYEEVFRNVFSYIDRMFSMIRPRKLLYMAIDGVAPRAKMNQQXXXXXX 373
PCFHP P PK+YEEVFRNVF YID++FSM+RPRKLL++ IDGVAPRAKMNQQ
Sbjct: 61 PCFHPSDLPPPKTYEEVFRNVFMYIDKIFSMVRPRKLLFLGIDGVAPRAKMNQQRSRRFR 120
Query: 374 XXXXXXXXXX----VFESEGATLSAL-DSKDLDSNVITPGTEFMASLSSALQYYIHLRLN 538
E EG ++L + LDSNVITPGTEFM LSSAL+YYI LR+N
Sbjct: 121 AAKEAEKEALKMKQFIELEGENSTSLKEPAVLDSNVITPGTEFMDLLSSALRYYIRLRVN 180
Query: 539 TDPGWCGVKVILSDASVVGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLALAT 718
D GW G+KVILSD++V GEGEHKIMSYIRLQR+LPG+DPNTRHCLYGLDADLIMLALAT
Sbjct: 181 RDSGWRGIKVILSDSNVPGEGEHKIMSYIRLQRDLPGYDPNTRHCLYGLDADLIMLALAT 240
Query: 719 HEIHFSILREDVSKVHQNTKNSKLGNGSMPKCQLDRKKELKLGQVGAEDYISRQKFQFFN 898
HE+HF+ILRE ++ H + + K P+ + + KK+ + E+Y+SR F+F
Sbjct: 241 HEVHFTILREVCAQKHSSKRGKKHKFVWNPQKKANSKKKKWMPVKTLEEYVSRLNFKFLY 300
Query: 899 VWVLRDYLAHDMKIPNPTVKTDLERLLDDFVFMCLLVGNDFLPHVPSLEISEGGIDLLMT 1078
+W LR++L +DM+IPN ++TDLERL+DDF+FMCL VGNDFLPH+P+LEIS+G IDLLM
Sbjct: 301 IWALREHLEYDMRIPNLALQTDLERLIDDFIFMCLFVGNDFLPHIPTLEISQGAIDLLMK 360
Query: 1079 VYKKEFVQMGGYLTDSSKVNLKHVEHFLQALGVHEGAIFRRRSQVQKEKDKRFGKANGGV 1258
VY+KEF +MGGYLT+S +++L VEHF+QA+G+H+ AIFR+ Q KEK R
Sbjct: 361 VYRKEFRRMGGYLTNSFELDLTRVEHFIQAVGLHDDAIFRQHIQKLKEKSAR-------- 412
Query: 1259 QSLRLSGKKSSKTFWSSVDLIPDSTLPSSSTFGAKESQSLMNSATP-DGSNGTVDNIKLG 1435
+ R S +K K + P + S + E MN P + +D
Sbjct: 413 KEERSSKRKLEKLLQND----PHAESISGGSSLLMEKAGGMNFDEPIHHLSAGIDTGDKE 468
Query: 1436 EEGWKERYYAEKFEAMTDNERDKIRKHAVLKYIEGMCWVMHYYYEGVCSWQWFYPYHYAP 1615
E+ WKERYYA+KF+A T +E++ IR+ V+KY+EG+CWVM YYYEGVCSWQWFYPYHYAP
Sbjct: 469 EDDWKERYYAKKFKAKTKDEQESIRRDVVIKYMEGLCWVMRYYYEGVCSWQWFYPYHYAP 528
Query: 1616 FASDFLDLELSDIQFTPGKPFKPLDQLMAVLPAASAHALPSCYRELMTDSSSPILEFYPN 1795
FASDF L+ IQFT G PFKP+DQLM VLPAASAHALP YR+LMTD SSPIL+FYP+
Sbjct: 529 FASDFYGLDDLKIQFTLGVPFKPMDQLMGVLPAASAHALPMLYRKLMTDESSPILDFYPS 588
Query: 1796 DFELDMNGKRFEWQAICKLPFIKESQLLAEIAKVEHTLTDEERRRNSLGMDILFLHVSHP 1975
DFELDMNGKR +WQAICKLPFI ES+LL+EI KVEHTLTD+ERRRNSLG + LF+H+SHP
Sbjct: 589 DFELDMNGKRRKWQAICKLPFIDESRLLSEITKVEHTLTDDERRRNSLGSNFLFVHISHP 648
Query: 1976 LAGEILIFYGRNKDHPKLAKAKVKREIDPKFSGGMNGFMYISDRPVWPPEICSSICDMEK 2155
LA I+ F+ +N+D L K IDP+ SGGMNGF+YISD V P E+ S + M
Sbjct: 649 LADMIIYFFKQNRDPNVLLK------IDPELSGGMNGFVYISDNAVCPEEVSSPVDGMRM 702
Query: 2156 ITMNKVISVFYKYPTSHPHIPRPPEGIVIPRTLVKKEDILPVLGMWHDTSAVRARVDSKK 2335
I N+VISV Y+YP H HI R P+G+++P +DI P+L V A V S++
Sbjct: 703 IAHNRVISVSYRYPLFHYHISRLPQGVILP-----GKDISPLL---QHEKVVPAGVSSRR 754
Query: 2336 PVPKSISGSSLAKLAHQLVSKYYVAQRKENVDPGILDGLVDT 2461
P+P+S+SG+ LA LAH+LVS ++ +N+ + LVDT
Sbjct: 755 PIPRSVSGTHLANLAHRLVSSCTPIKQDDNLGYKGPNILVDT 796
>emb|CAN59715.1| hypothetical protein VITISV_006076 [Vitis vinifera]
Length = 1102
Score = 798 bits (2062), Expect = 0.0
Identities = 401/616 (65%), Positives = 471/616 (76%), Gaps = 12/616 (1%)
Frame = +2
Query: 26 SFYRWLVERYPRAVEDVIEASPRVINGVKVPIDSSQPNPNGIEFDNLYIDMNGIIHPCFH 205
+FYRWL +RYP AV + +E P V+NGV V +D+++PNPNG EFDNLY+DMNGIIHPCFH
Sbjct: 136 AFYRWLADRYPLAVVNAVEDRPAVVNGVSVAVDTTRPNPNGNEFDNLYLDMNGIIHPCFH 195
Query: 206 PEGQPAPKSYEEVFRNVFSYIDRMFSMIRPRKLLYMAIDGVAPRAKMNQQXXXXXXXXXX 385
PEG PAPK+Y +VF+ VF YIDR+FS++RPRKLLYMAIDGVAPRAKMNQQ
Sbjct: 196 PEGLPAPKTYTDVFKAVFKYIDRIFSLVRPRKLLYMAIDGVAPRAKMNQQRARRFRAAKE 255
Query: 386 XXXXXX-------VFESEGATLSALD-SKDLDSNVITPGTEFMASLSSALQYYIHLRLNT 541
VFESE L+ LD +K LDSNVITPGTEFMA LSSAL+YYIHLR+N
Sbjct: 256 AADDASGTERLKTVFESEMEMLALLDQTKKLDSNVITPGTEFMALLSSALKYYIHLRMNL 315
Query: 542 DPGWCGVKVILSDASVVGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLALATH 721
DPGW G+KVILSDA+V GEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLALATH
Sbjct: 316 DPGWRGIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLALATH 375
Query: 722 EIHFSILREDVSKVHQNTKNSKLGNGSMPKCQLDRKKELKLGQVGAEDYISRQKFQFFNV 901
EIHFSILREDV K ++ KN+K S+ + K+ ++G ED+ISRQKFQF N+
Sbjct: 376 EIHFSILREDVHKAYRKDKNNKPRKDSLLVNKRGXSKQGEVGGEDIEDFISRQKFQFLNI 435
Query: 902 WVLRDYLAHDMKIPNPTVKTDLERLLDDFVFMCLLVGNDFLPHVPSLEISEGGIDLLMTV 1081
W LRDYLAHDM IP+ ++KTDLERL+DDFVFMCL VGNDFLPH+PSLEISEG IDLLMTV
Sbjct: 436 WTLRDYLAHDMSIPDRSLKTDLERLIDDFVFMCLFVGNDFLPHMPSLEISEGAIDLLMTV 495
Query: 1082 YKKEFVQMGGYLTDSSKVNLKHVEHFLQALGVHEGAIFRRRSQVQKEKDKRFGKANGGVQ 1261
YKKEFVQ+GGYLT+SS+V L+ VE F+Q +G HE AIFR+RSQVQK++ RF
Sbjct: 496 YKKEFVQIGGYLTNSSEVYLERVERFMQVVGSHENAIFRKRSQVQKKRGVRF-------- 547
Query: 1262 SLRLSGKKSSKTFWSSVDLIPDSTLPSSSTFGAKESQSLMNSATPDGSNGTVDNIKLGEE 1441
+ S K + + +S+ + + SS SL TP + NIKLGE+
Sbjct: 548 --QGSSNKKTVSDYSTTPCVEPQGMTGSS------GSSLEPRKTPFCQDS--KNIKLGED 597
Query: 1442 GWKERYYAEKFEAMTDNERDKIRKHAVLKYIEGMCWVMHYYYEGVCSWQWFYPYHYAPFA 1621
GWKER+Y EKFEA T+++R+++R+HAVLKYIEG+CWVMHYYY+GVCSWQWFYPYHYAPFA
Sbjct: 598 GWKERFYVEKFEAKTEDDRERVRRHAVLKYIEGICWVMHYYYQGVCSWQWFYPYHYAPFA 657
Query: 1622 SDFLDLELSDIQFTPGKPFKPLDQLMAVLPAA----SAHALPSCYRELMTDSSSPILEFY 1789
SD L+ DIQFT GKPFKP DQLM VLPAA SAHALP YR+LM D +SPIL+FY
Sbjct: 658 SDIYGLDQLDIQFTLGKPFKPFDQLMGVLPAARCTYSAHALPLYYRKLMMDETSPILDFY 717
Query: 1790 PNDFELDMNGKRFEWQ 1837
P DFELDMNGKR+ WQ
Sbjct: 718 PADFELDMNGKRYPWQ 733
Score = 162 bits (409), Expect = 5e-37
Identities = 109/258 (42%), Positives = 149/258 (57%), Gaps = 19/258 (7%)
Frame = +2
Query: 1838 AICKLPFIKESQLLAEIAKVEHTLTDEERRRNSLGMDILFLHVSHPLAGEILIFYGRNKD 2017
AICKLPFIKES+LLAEIAKVE TLTD+E+ RN LGMD LF+H+S PLA +I FY R KD
Sbjct: 807 AICKLPFIKESRLLAEIAKVESTLTDKEKLRNRLGMDALFIHISDPLAVKIFSFYKRKKD 866
Query: 2018 HPKLAKAKVKREIDPKF------SGGMNGFMYISDRPVWPPEICSSICDMEKITMNKVIS 2179
HPKL AKVKR+IDPKF N + S P P I S+ ++ K++ +
Sbjct: 867 HPKLPMAKVKRKIDPKFRLTPQTQALQNLTVTTSKLPYALPLISSN--ELSKVSAGRYAY 924
Query: 2180 V-----------FYKYPTSHPHIPRPPEGIVIPRTLVKKEDILPVLGMWHDTSAVRARVD 2326
V ++ S P I + P + + T++K + P + +WH+TSAV R
Sbjct: 925 VPXVQRTQADXGGLRWFKSQPTICKLP-NLELLHTVIKPHLLRPPV-LWHETSAVCGRKF 982
Query: 2327 SKKPVPKSISGSSLAKLAHQLVSKYYVAQRKENVDPGILDGLV--DTDDPYRANQTNVTE 2500
S++P+P S+SG LAKLAH+LV +Y +A+R+E + G L + DT + +T
Sbjct: 983 SERPIPNSVSGPCLAKLAHRLVFEYCLAKRQETLGRGELSDHIGPDTLRQSPSKETGNAR 1042
Query: 2501 PEKKGPDSAVTKTSKKRK 2554
+S V S+KRK
Sbjct: 1043 GIDGYNESCVDGRSRKRK 1060
>ref|NP_199069.1| 5'-3' exoribonuclease 2 [Arabidopsis thaliana]
gi|75262831|sp|Q9FQ02.1|XRN2_ARATH RecName: Full=5'-3'
exoribonuclease 2; AltName: Full=Protein EXORIBONUCLEASE
2 gi|11875630|gb|AAG40733.1|AF286720_1 XRN2 [Arabidopsis
thaliana] gi|51970342|dbj|BAD43863.1| unnamed protein
product [Arabidopsis thaliana]
gi|62319144|dbj|BAD94308.1| 5'-3' exoribonuclease 2
[Arabidopsis thaliana] gi|332007441|gb|AED94824.1| 5'-3'
exoribonuclease 2 [Arabidopsis thaliana]
Length = 1012
Score = 775 bits (2002), Expect = 0.0
Identities = 418/861 (48%), Positives = 545/861 (63%), Gaps = 61/861 (7%)
Frame = +2
Query: 14 MGIPSFYRWLVERYPRAVEDVIEASPRVING--VKVPIDSSQPNPNGIEFDNLYIDMNGI 187
MG+PSFYRWL++RYP +++VIE P +NG V +PIDSS+PNPNG E+DNLY+DMNGI
Sbjct: 1 MGVPSFYRWLIQRYPLTIQEVIEEEPLEVNGGGVTIPIDSSKPNPNGYEYDNLYLDMNGI 60
Query: 188 IHPCFHPEGQPAPKSYEEVFRNVFSYIDRMFSMIRPRKLLYMAIDGVAPRAKMNQQXXXX 367
IHPCFHPE +P+P ++ EVF+ +F YIDR+F M+RPRKLL+MAIDGVAPRAKMNQQ
Sbjct: 61 IHPCFHPEDKPSPTTFTEVFQCMFDYIDRLFVMVRPRKLLFMAIDGVAPRAKMNQQRARR 120
Query: 368 XXXXXXXXXXXXV-------FESEGATLSA-LDSKDLDSNVITPGTEFMASLSSALQYYI 523
FE EG L +DS+ DSNVITPGTEFMA+LS AL+YYI
Sbjct: 121 FRAAKDAAEAAAEEEQLREEFEREGKKLPPKVDSQVFDSNVITPGTEFMATLSFALRYYI 180
Query: 524 HLRLNTDPGWCGVKVILSDASVVGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 703
H+RLN+DPGW +KVILSDA+V GEGEHKIMSYIR +N PG++PNT HCLYGLDADLIM
Sbjct: 181 HVRLNSDPGWKNIKVILSDANVPGEGEHKIMSYIRCNKNHPGYNPNTHHCLYGLDADLIM 240
Query: 704 LALATHEIHFSILREDVSKVHQNTKNSKLGNGSMPKCQLDRKKELKLGQV---GAEDYIS 874
L+LATHEIHFSILRE V + K G + K + K G++ D +
Sbjct: 241 LSLATHEIHFSILREVVFFPGEEGKCFLCGQEGHRAADCEGKIKRKTGEMLDNTEADVVV 300
Query: 875 RQKFQFFNVWVLRDYLAHDMKIPNPTVKTDLERLLDDFVFMCLLVGNDFLPHVPSLEISE 1054
++ ++F N+W+LR+YL HDM+IP K +L+RL+DDF+F+C VGNDFLPH+P+LEI E
Sbjct: 301 KKPYEFVNIWILREYLEHDMQIPG--AKKNLDRLIDDFIFICFFVGNDFLPHMPTLEIRE 358
Query: 1055 GGIDLLMTVYKKEFVQMGGYLTDSSKVNLKHVEHFLQALGVHEGAIFRRRSQVQKEKDKR 1234
G I+LLM+VYK +F YLTDSSK+NL++VE F++A+G++E IF++R+QVQ+ + +R
Sbjct: 359 GAIELLMSVYKNKFRSAKKYLTDSSKLNLRNVERFIKAVGMYENQIFQKRAQVQQRQSER 418
Query: 1235 F--GKANGGVQSLRLSGKKSSKTF------WSSVDLIPDSTLPSSS-------------- 1348
F KA + ++S+ F S+D + DS S S
Sbjct: 419 FRRDKARDKARDNARDNAQASRQFSGKLVQLDSLDEVSDSLHSSPSRKYLRLSLDDNIGV 478
Query: 1349 ----TFGAKESQSLMNSA------------TPDG---SNGTVDNIKLGEEGWKERYYAEK 1471
T + +++ L N DG NG D +KL + GW+ERYY EK
Sbjct: 479 ANVETENSLKAEELDNEEDLKFKLKKLLRDKGDGFRSGNGEQDKVKLNKVGWRERYYEEK 538
Query: 1472 FEAMTDNERDKIRKHAVLKYIEGMCWVMHYYYEGVCSWQWFYPYHYAPFASDFLDLELSD 1651
F A + E ++IR+ VLKY EG+CW+MHYYY GVCSW WFYPYHYAPFASD LE D
Sbjct: 539 FAAKSVEEMEQIRRDVVLKYTEGLCWIMHYYYHGVCSWNWFYPYHYAPFASDLKGLEKLD 598
Query: 1652 IQFTPGKPFKPLDQLMAVLPAASAHALPSCYRELMTDSSSPILEFYPNDFELDMNGKRFE 1831
I+F G PFKP +QL+AVLP+ASAHALP CYR LMT+ SPI +FYP DFE+DMNGKR+
Sbjct: 599 IKFELGSPFKPFNQLLAVLPSASAHALPECYRSLMTNPDSPIADFYPADFEIDMNGKRYS 658
Query: 1832 WQAICKLPFIKESQLLAEIAKVEHTLTDEERRRNSLGMDILFLHVSHPLAGEILIFYGRN 2011
WQ I KLPF++E +LL A+VE +LT+EE RRNS D+LF+ SHPL I R
Sbjct: 659 WQGISKLPFVEEKRLLEAAAQVEKSLTNEEIRRNSALFDMLFVVASHPLGELIRSLNSRT 718
Query: 2012 KDHPKLAKAKVKREIDPKFSGGMNGFMYISDRPVWPPEICSSICDMEKITMNKVISVFYK 2191
+ +A + +IDP S GMNG++ P CS++ ME + N+VI YK
Sbjct: 719 NNLSNEERATIIEKIDPGLSDGMNGYIASCGGDSQPSCFCSTVEGMEDVLTNQVICAIYK 778
Query: 2192 YPTS--HPHIPRPPEGIVIPRTLVKKEDILPVLGMWHDTSAVRAR----VDSKKPVPK-S 2350
P I + IP+ + D+ +WH+ R + K+ P+ S
Sbjct: 779 LPEDIRGSEITHQIPRLAIPKKTISLVDLKSGGLLWHEDGDKRRAPPKVIKIKRYNPEGS 838
Query: 2351 ISGSSLAKLAHQLVSKYYVAQ 2413
ISG L K +H+LV + AQ
Sbjct: 839 ISGGRLGKASHRLVLQTINAQ 859