BLASTX nr result
ID: Aconitum21_contig00013575
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Aconitum21_contig00013575
(1558 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002272207.2| PREDICTED: 5'-3' exoribonuclease 3-like [Vit... 199 3e-79
ref|XP_002523870.1| 5'->3' exoribonuclease, putative [Ricinus co... 169 6e-74
ref|XP_003606089.1| 5'-3' exoribonuclease [Medicago truncatula] ... 171 1e-72
gb|EAY76660.1| hypothetical protein OsI_04616 [Oryza sativa Indi... 186 7e-72
ref|NP_001044947.1| Os01g0872700 [Oryza sativa Japonica Group] g... 186 7e-72
>ref|XP_002272207.2| PREDICTED: 5'-3' exoribonuclease 3-like [Vitis vinifera]
Length = 1072
Score = 199 bits (506), Expect(2) = 3e-79
Identities = 111/256 (43%), Positives = 156/256 (60%), Gaps = 1/256 (0%)
Frame = -3
Query: 953 GHPFKPFDQLMGVLPPRSVYALPKAYWPLIISEQSNLIDMYPTDFDVDVEGKRYLWQGIL 774
G PFKPFDQLMGVLPP S +ALPKAY PL+I E SN+ID Y T+F+VD +GKR++WQGI
Sbjct: 672 GSPFKPFDQLMGVLPPSSAHALPKAYQPLMIDEDSNIIDFYNTNFEVDTDGKRFIWQGIC 731
Query: 773 KLPFIDEKRLCSETKNLEKALEEDELRRNTENKEKIFVLKSHELGLQIASLHKEYASLKP 594
KLPFIDE RL +ET+ LEK LE+ E RN + +++F+ S +L L ++ + KP
Sbjct: 732 KLPFIDEARLLAETRKLEKELEDQEAVRNARSFDQLFLRFSDKLRLFYT---EQVSCRKP 788
Query: 593 ETDIRMEIDTCACGLNGFISSISKESCSATYNLCLNE-MENPVKDDVVCATYEYPHNHLH 417
+++ + G+NG+I + + CL++ +EN +DDV+ YE P+ LH
Sbjct: 789 NKTAKID-SNFSLGINGYI-CFDNNGLNMMNSTCLDKNLENIQEDDVISMLYEVPNGCLH 846
Query: 416 IPRLHENVNIPEKTITEADIVKQPLWHEYEGYRPTDRSNNHDRHRKGIKGSTSSEVAGTF 237
IPR E P KTITEADI + LWHEY+G +P + H+ I S+ G+
Sbjct: 847 IPRPLEGTIFPFKTITEADIEETLLWHEYKGSKPPVKFRGHEGFGPAI-NRLKSKACGSS 905
Query: 236 SKAAGFGWSAGRGKTS 189
+ +A G + R +S
Sbjct: 906 TISAASGLNVARAGSS 921
Score = 124 bits (311), Expect(2) = 3e-79
Identities = 77/218 (35%), Positives = 118/218 (54%), Gaps = 21/218 (9%)
Frame = -2
Query: 1557 GDYLVDTQKLDDKKAGYLNLKRIEKFFLSVGKYEEQIYRKRTNIRQIMIKRFMRE----M 1390
G Y+VD +++++KK ++ LKR+EKF L VG YEE+I++KR +R ++ + E
Sbjct: 424 GGYMVDMERIEEKKGSFVKLKRVEKFILLVGTYEEKIFKKRMALRDSKLRWLLCENSDIF 483
Query: 1389 ANNEDD----LEIEQENSVIQAVSISDLNINGRRNCCNETNLE---GSCSKCDSTLF--- 1240
NNE+D LEI N + S + + N + E S+ + LF
Sbjct: 484 TNNEEDQSCNLEIGSTNRGCTSPSGKARSSSSVENLGTSSGTEYLITDKSEMFALLFLKH 543
Query: 1239 GACNNVDDVXXXXXXXXXXXKAV-------MREKSDIFKQGGLESDKVKFGMEGWRERYY 1081
+ ++D + K + +R KSD+++ G L D+V+ G GW+ERYY
Sbjct: 544 SSARSLDLLLVNATLATFYTKEMKKRLKENIRAKSDLWRSGSLGIDRVRLGHPGWKERYY 603
Query: 1080 KEKLCAENPKEVESIRKDIVQKYVEGLCWVLQYYFAGV 967
KEK + + +ES RK++VQKY EGL WVLQYYF+GV
Sbjct: 604 KEKCSCDTSQGIESTRKELVQKYTEGLLWVLQYYFSGV 641
>ref|XP_002523870.1| 5'->3' exoribonuclease, putative [Ricinus communis]
gi|223536958|gb|EEF38596.1| 5'->3' exoribonuclease,
putative [Ricinus communis]
Length = 993
Score = 169 bits (427), Expect(2) = 6e-74
Identities = 100/265 (37%), Positives = 140/265 (52%), Gaps = 12/265 (4%)
Frame = -3
Query: 953 GHPFKPFDQLMGVLPPRSVYALPKAYWPLIISEQSNLIDMYPTDFDVDVEGKRYLWQGIL 774
G PFKPFDQLMGVLPPRS +ALPK+Y L+I E+S++ID YP +F +D++GKR++WQGI
Sbjct: 582 GSPFKPFDQLMGVLPPRSAHALPKSYRQLMIDERSSIIDFYPAEFQIDIDGKRFMWQGIC 641
Query: 773 KLPFIDEKRLCSETKNLEKALEEDELRRNTENKEKIFVLKSHELGLQIASLHKEYASLKP 594
KLPFIDE+RL +ETK +EK L E +N EN +K+FV + + Q+ L E+A+ +P
Sbjct: 642 KLPFIDEERLLAETKKMEKELTRKEADKNVENVDKLFVRRENFSESQLLQLVSEFAAGRP 701
Query: 593 ETDIRMEIDTCACGLNGFISSISKESCSATYNLCLNEMENPVKDDVVCATYEYPHNHLHI 414
+ + +K+ + C +E P I
Sbjct: 702 KDMVE------------------------------------IKNSLRCLLFELPKGSQFI 725
Query: 413 PRLHENVNIPEKTITEADIVKQPLWHEYEGYR-PT----DRSNNHDRHRKGIKGSTSSE- 252
PR E V PE+ I + DI++ LWHE G R PT S+ HR+ S S+E
Sbjct: 726 PRPLEGVKYPEQIIGDDDIMETQLWHECPGSRCPTRLRVQESHIKSYHRRDFAPSFSAER 785
Query: 251 VAGTFSKAAGFGW------SAGRGK 195
G +S + W GRG+
Sbjct: 786 NNGNYSGESASNWYFEPTHKGGRGR 810
Score = 137 bits (344), Expect(2) = 6e-74
Identities = 76/198 (38%), Positives = 116/198 (58%), Gaps = 1/198 (0%)
Frame = -2
Query: 1557 GDYLVDTQKLDDKKAGYLNLKRIEKFFLSVGKYEEQIYRKRTNIRQIMIKRFMREM-ANN 1381
G YLVD +++ K YL+LKR+EKF L +G YEE I++KR+ +R+ M+++ + A N
Sbjct: 366 GGYLVDVHQVNSLKNDYLDLKRVEKFILLIGAYEEMIFKKRSELRERMLRKLCQHSDAAN 425
Query: 1380 EDDLEIEQENSVIQAVSISDLNINGRRNCCNETNLEGSCSKCDSTLFGACNNVDDVXXXX 1201
+L+ E +++ +S S L+ + + +L + S F N
Sbjct: 426 AKELDGNVEQDMLK-ISFSSLDAKAQIS----EDLVSVSAVSISLWFSVLQNTK------ 474
Query: 1200 XXXXXXXKAVMREKSDIFKQGGLESDKVKFGMEGWRERYYKEKLCAENPKEVESIRKDIV 1021
KA +R+KSD+F+ GG +D VK G GW++RYY++K AENP ++E IRK++V
Sbjct: 475 -RFKEELKARLRQKSDLFQNGGFRADTVKLGTTGWKKRYYEQKFSAENPSDIELIRKEMV 533
Query: 1020 QKYVEGLCWVLQYYFAGV 967
QKY EGL WVL YYF+ V
Sbjct: 534 QKYTEGLLWVLGYYFSAV 551
>ref|XP_003606089.1| 5'-3' exoribonuclease [Medicago truncatula]
gi|355507144|gb|AES88286.1| 5'-3' exoribonuclease
[Medicago truncatula]
Length = 866
Score = 171 bits (432), Expect(2) = 1e-72
Identities = 107/274 (39%), Positives = 149/274 (54%), Gaps = 20/274 (7%)
Frame = -3
Query: 953 GHPFKPFDQLMGVLPPRSVYALPKAYWPLIISEQSNLIDMYPTDFDVDVEGKRYLWQGIL 774
G PF PFDQL+ VLP +S YALPKAY L++ EQS + D+Y DF++D+EGKR++WQG+
Sbjct: 551 GVPFLPFDQLLSVLPQKSAYALPKAYAQLMLDEQSKIFDLYSQDFEIDIEGKRFMWQGVC 610
Query: 773 KLPFIDEKRLCSETKNLEKALEEDELRRNTENKEKIFVLKSHELGLQIASLHKEYASLKP 594
KLP++DEKRL +ET+ L+ L E E +RN+ +++ V + +L +I SL K
Sbjct: 611 KLPYMDEKRLLTETRELKNELSESEAKRNSVEVDRLLVSGTTKLAEKICSLKLN----KL 666
Query: 593 ETDIRMEIDTCACGLNGFISSISKESCSATYNLCLNEMENPVKDDVV-CATYEYP-HNHL 420
+T I + G+ G IS LC +EN +D+V C YE+P
Sbjct: 667 DTSI-------SDGIGGIIS------------LCHECVENNKHEDIVFCVKYEHPVGGTS 707
Query: 419 HIPRLHENVNIPEKTITEADIVKQPLWHEY-EGYRPTDRSNNHDRHRKGIKGSTSSEV-- 249
H+ L VN+PEKTI E DI + LWH+ + Y R+NN D R K S+
Sbjct: 708 HVQHLLCGVNLPEKTIFENDINETVLWHDQSQQYSCFGRANNQDNWRNSNKEGNVSKFHP 767
Query: 248 ------AGTFS---------KAAGFGWSAGRGKT 192
+FS K AG GW +GRGK+
Sbjct: 768 NSTSFGGRSFSRNAPPESIHKGAGVGWGSGRGKS 801
Score = 130 bits (328), Expect(2) = 1e-72
Identities = 77/204 (37%), Positives = 108/204 (52%), Gaps = 7/204 (3%)
Frame = -2
Query: 1557 GDYLVDTQKLDDKKAGYLNLKRIEKFFLSVGKYEEQIYRKRTNIRQIMIKRFM------- 1399
G YLVD K+ +K Y+ L R+EKF L VG YEE+I+ KRT IR ++R +
Sbjct: 338 GGYLVDINKIGEKHGAYVKLSRVEKFVLMVGTYEEKIFSKRTAIRDKKLRRLISDNENSK 397
Query: 1398 REMANNEDDLEIEQENSVIQAVSISDLNINGRRNCCNETNLEGSCSKCDSTLFGACNNVD 1219
+E N+ D ++ + ENS A+ I + N C +++ E N
Sbjct: 398 QEELNSHDCMDFDNENSSNCALRIKKAEASD--NVCPQSDEE------------ILKNTK 443
Query: 1218 DVXXXXXXXXXXXKAVMREKSDIFKQGGLESDKVKFGMEGWRERYYKEKLCAENPKEVES 1039
D+ +++K D+FK G +DK+K G G++ERYYKEK E +E
Sbjct: 444 DLKEKLKKC-------IKDKGDLFKSGDFLTDKIKLGNVGFKERYYKEKFSVEGSTNIEL 496
Query: 1038 IRKDIVQKYVEGLCWVLQYYFAGV 967
RK+IVQKY EGL WVLQYYF+GV
Sbjct: 497 KRKEIVQKYTEGLLWVLQYYFSGV 520
>gb|EAY76660.1| hypothetical protein OsI_04616 [Oryza sativa Indica Group]
Length = 1068
Score = 186 bits (472), Expect(2) = 7e-72
Identities = 105/251 (41%), Positives = 145/251 (57%), Gaps = 4/251 (1%)
Frame = -3
Query: 974 LELSHGLGHPFKPFDQLMGVLPPRSVYALPKAYWPLIISEQSNLIDMYPTDFDVDVEGKR 795
L ++ LG PFKPFDQLMGV P S +ALP Y L+ S +ID YPTDF+VD+ GKR
Sbjct: 610 LNITFELGSPFKPFDQLMGVFPAASSHALPVQYRQLMTDANSPIIDFYPTDFEVDMNGKR 669
Query: 794 YLWQGILKLPFIDEKRLCSETKNLEKALEEDELRRNTENKEKIFVLKSHELGLQIASLHK 615
Y WQGI KLPFIDE RL +E K +E L +E RRN+ +FV SH L I SL+
Sbjct: 670 YSWQGIAKLPFIDEARLLAEIKKVEHTLTPEEARRNSIMFNMLFVNGSHPLSPYIYSLNS 729
Query: 614 EYASL--KPETDIRMEID-TCACGLNGFISSISKESCSATYNLCLNEMENPVKDDVVCAT 444
++ L + +I+ +ID + + G+NG+IS S + C + ++ +E+ + + V+C
Sbjct: 730 KFGHLPDRERNEIKEKIDPSSSGGMNGYISLCSGDPCPPVFRSPVDGLEDIMDNQVICTI 789
Query: 443 YEYPHNHLHIPRLHENVNIPEKTITEADIVKQP-LWHEYEGYRPTDRSNNHDRHRKGIKG 267
Y+ P +H HI R V IP+KT+ D+ P LWHE G RP D +N R+ +
Sbjct: 790 YKLPDSHKHIARPPVGVIIPKKTVEATDLKPPPVLWHEDSGRRPHDNNN-----RRPYEN 844
Query: 266 STSSEVAGTFS 234
S AG S
Sbjct: 845 SNRQNPAGAIS 855
Score = 112 bits (281), Expect(2) = 7e-72
Identities = 73/220 (33%), Positives = 106/220 (48%), Gaps = 23/220 (10%)
Frame = -2
Query: 1557 GDYLVDTQKLDDKKAGYLNLKRIEKFFLSVGKYEEQIYRKRTNIRQIMIKRFMREMANNE 1378
G YL D D L ++E F +VG YE++I++KR + Q +R RE A +
Sbjct: 375 GGYLTDACTPD--------LNKVEHFIQAVGSYEDKIFQKRARLHQRQAERIKREKAQAK 426
Query: 1377 --DDLEIEQENSVIQAVSI-------------------SDLNINGRRNCCNET-NLEGSC 1264
DDL+ + +I V+ SD N G+ + + + S
Sbjct: 427 RGDDLDPHVRDDLIVPVARFQGSRLASGPAPSPYEQNGSDKNNGGKNSRARKAARVSSSG 486
Query: 1263 SKCDSTLFGACNNVD-DVXXXXXXXXXXXKAVMREKSDIFKQGGLESDKVKFGMEGWRER 1087
S + + A N+++ K +REKSD+F E DK+K G GWRER
Sbjct: 487 SSIAAAIVEAENDLEAQERENKEDLKTMLKDALREKSDVFNSENPEEDKIKLGEPGWRER 546
Query: 1086 YYKEKLCAENPKEVESIRKDIVQKYVEGLCWVLQYYFAGV 967
YY+EK A P ++E IR+D+V KY EGLCWV+ YY+ GV
Sbjct: 547 YYEEKFGARTPGQIEEIRRDVVLKYTEGLCWVMHYYYEGV 586
>ref|NP_001044947.1| Os01g0872700 [Oryza sativa Japonica Group]
gi|56785082|dbj|BAD82721.1| putative 5'-3'
exoribonuclease (XRN3) [Oryza sativa Japonica Group]
gi|113534478|dbj|BAF06861.1| Os01g0872700 [Oryza sativa
Japonica Group] gi|215713440|dbj|BAG94577.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 1068
Score = 186 bits (472), Expect(2) = 7e-72
Identities = 105/251 (41%), Positives = 145/251 (57%), Gaps = 4/251 (1%)
Frame = -3
Query: 974 LELSHGLGHPFKPFDQLMGVLPPRSVYALPKAYWPLIISEQSNLIDMYPTDFDVDVEGKR 795
L ++ LG PFKPFDQLMGV P S +ALP Y L+ S +ID YPTDF+VD+ GKR
Sbjct: 610 LNITFELGSPFKPFDQLMGVFPAASSHALPVQYRQLMTDANSPIIDFYPTDFEVDMNGKR 669
Query: 794 YLWQGILKLPFIDEKRLCSETKNLEKALEEDELRRNTENKEKIFVLKSHELGLQIASLHK 615
Y WQGI KLPFIDE RL +E K +E L +E RRN+ +FV SH L I SL+
Sbjct: 670 YSWQGIAKLPFIDEARLLAEIKKVEHTLTPEEARRNSIMFNMLFVNGSHPLSPYIYSLNS 729
Query: 614 EYASL--KPETDIRMEID-TCACGLNGFISSISKESCSATYNLCLNEMENPVKDDVVCAT 444
++ L + +I+ +ID + + G+NG+IS S + C + ++ +E+ + + V+C
Sbjct: 730 KFGHLPDRERNEIKEKIDPSSSGGMNGYISLCSGDPCPPVFRSPVDGLEDIMDNQVICTI 789
Query: 443 YEYPHNHLHIPRLHENVNIPEKTITEADIVKQP-LWHEYEGYRPTDRSNNHDRHRKGIKG 267
Y+ P +H HI R V IP+KT+ D+ P LWHE G RP D +N R+ +
Sbjct: 790 YKLPDSHKHIARPPVGVIIPKKTVEATDLKPPPVLWHEDSGRRPHDNNN-----RRPYEN 844
Query: 266 STSSEVAGTFS 234
S AG S
Sbjct: 845 SNRQNPAGAIS 855
Score = 112 bits (281), Expect(2) = 7e-72
Identities = 73/220 (33%), Positives = 106/220 (48%), Gaps = 23/220 (10%)
Frame = -2
Query: 1557 GDYLVDTQKLDDKKAGYLNLKRIEKFFLSVGKYEEQIYRKRTNIRQIMIKRFMREMANNE 1378
G YL D D L ++E F +VG YE++I++KR + Q +R RE A +
Sbjct: 375 GGYLTDACTPD--------LNKVEHFIQAVGSYEDKIFQKRARLHQRQAERIKREKAQAK 426
Query: 1377 --DDLEIEQENSVIQAVSI-------------------SDLNINGRRNCCNET-NLEGSC 1264
DDL+ + +I V+ SD N G+ + + + S
Sbjct: 427 RGDDLDPHVRDDLIVPVARFQGSRLASGPVPSPYEQNGSDKNNGGKNSRARKAARVSSSG 486
Query: 1263 SKCDSTLFGACNNVD-DVXXXXXXXXXXXKAVMREKSDIFKQGGLESDKVKFGMEGWRER 1087
S + + A N+++ K +REKSD+F E DK+K G GWRER
Sbjct: 487 SSIAAAIVEAENDLEAQERENKEDLKTMLKDALREKSDVFNSENPEEDKIKLGEPGWRER 546
Query: 1086 YYKEKLCAENPKEVESIRKDIVQKYVEGLCWVLQYYFAGV 967
YY+EK A P ++E IR+D+V KY EGLCWV+ YY+ GV
Sbjct: 547 YYEEKFGARTPGQIEEIRRDVVLKYTEGLCWVMHYYYEGV 586