BLASTX nr result

ID: Aconitum21_contig00012960 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00012960
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW70312.1| hypothetical protein ZEAMMB73_348995 [Zea mays]        165   4e-39
ref|XP_002451632.1| hypothetical protein SORBIDRAFT_04g004900 [S...   164   5e-39
ref|XP_003570303.1| PREDICTED: ribosomal RNA large subunit methy...   162   2e-38
ref|XP_002265047.2| PREDICTED: ribosomal RNA large subunit methy...   161   4e-38
ref|XP_004139905.1| PREDICTED: ribosomal RNA large subunit methy...   161   6e-38

>gb|AFW70312.1| hypothetical protein ZEAMMB73_348995 [Zea mays]
          Length = 384

 Score =  165 bits (417), Expect = 4e-39
 Identities = 83/124 (66%), Positives = 97/124 (78%)
 Frame = -3

Query: 372 SSPSSSSICLQEIANTHXXXXXXXXXXXXVQLFRDGSPMVYSGAVDRIIGRPPPKTGDIV 193
           +S SSSS  L+++A  H             Q+FRDGSPMVYSGAV+RIIGRPPPK+GDIV
Sbjct: 38  ASASSSSSTLEDLAAEHRGLAKVILKKGKTQIFRDGSPMVYSGAVNRIIGRPPPKSGDIV 97

Query: 192 LVADGTEKPIGWGMYNSVSMFCVRLMQLEEEAAIDPSSALSMEKLLENRIHDAIHFRTNM 13
           LVADGTEKPIGWG+YNSVSMFCVRLMQLEEEA  DP+ AL+ME+LLE RI  A+  R ++
Sbjct: 98  LVADGTEKPIGWGLYNSVSMFCVRLMQLEEEARRDPTCALNMERLLEARISSAVGLRHSL 157

Query: 12  GLPS 1
           GLPS
Sbjct: 158 GLPS 161


>ref|XP_002451632.1| hypothetical protein SORBIDRAFT_04g004900 [Sorghum bicolor]
           gi|241931463|gb|EES04608.1| hypothetical protein
           SORBIDRAFT_04g004900 [Sorghum bicolor]
          Length = 460

 Score =  164 bits (416), Expect = 5e-39
 Identities = 82/124 (66%), Positives = 96/124 (77%)
 Frame = -3

Query: 372 SSPSSSSICLQEIANTHXXXXXXXXXXXXVQLFRDGSPMVYSGAVDRIIGRPPPKTGDIV 193
           +S SSSS  L+E+A                Q+FRDGSPMVYSGAVDRIIGRPPPK+GD+V
Sbjct: 38  ASASSSSSALEELAAERRGLAKVILKKGKTQIFRDGSPMVYSGAVDRIIGRPPPKSGDVV 97

Query: 192 LVADGTEKPIGWGMYNSVSMFCVRLMQLEEEAAIDPSSALSMEKLLENRIHDAIHFRTNM 13
           LVADGTEKPIGWG+YNSVSMFCVRLMQLEE+A  DP+ AL+ME+LLE RI  A+  R ++
Sbjct: 98  LVADGTEKPIGWGLYNSVSMFCVRLMQLEEDAIRDPTCALNMERLLEARISSAVDLRRSL 157

Query: 12  GLPS 1
           GLPS
Sbjct: 158 GLPS 161


>ref|XP_003570303.1| PREDICTED: ribosomal RNA large subunit methyltransferase I-like
           [Brachypodium distachyon]
          Length = 448

 Score =  162 bits (411), Expect = 2e-38
 Identities = 85/135 (62%), Positives = 99/135 (73%), Gaps = 4/135 (2%)
 Frame = -3

Query: 393 VGVRLMKSSPSS----SSICLQEIANTHXXXXXXXXXXXXVQLFRDGSPMVYSGAVDRII 226
           V  RL K + S+    SS  L+E+A                Q+FRDGSPMVYSGAVDRII
Sbjct: 13  VRARLTKPAASAVAVASSSALEELAADRKGLARVVLKKGKTQIFRDGSPMVYSGAVDRII 72

Query: 225 GRPPPKTGDIVLVADGTEKPIGWGMYNSVSMFCVRLMQLEEEAAIDPSSALSMEKLLENR 46
           GRPPPKTGD+VLVADG+EKPIGWG+YNSVSMFCVRLMQLEEEA  DP+SAL+M +LLE R
Sbjct: 73  GRPPPKTGDVVLVADGSEKPIGWGLYNSVSMFCVRLMQLEEEAKRDPTSALNMGRLLEER 132

Query: 45  IHDAIHFRTNMGLPS 1
           I  A+  R ++GLPS
Sbjct: 133 ISSAVDLRRSLGLPS 147


>ref|XP_002265047.2| PREDICTED: ribosomal RNA large subunit methyltransferase I-like
           [Vitis vinifera]
          Length = 507

 Score =  161 bits (408), Expect = 4e-38
 Identities = 78/94 (82%), Positives = 84/94 (89%)
 Frame = -3

Query: 282 QLFRDGSPMVYSGAVDRIIGRPPPKTGDIVLVADGTEKPIGWGMYNSVSMFCVRLMQLEE 103
           QLFRDGSPMVYSGAVDRIIGRPPP+TGD+V+VADGTEKPIGWG+YNSVSMFCVRLMQ EE
Sbjct: 113 QLFRDGSPMVYSGAVDRIIGRPPPRTGDVVVVADGTEKPIGWGLYNSVSMFCVRLMQQEE 172

Query: 102 EAAIDPSSALSMEKLLENRIHDAIHFRTNMGLPS 1
           EA  DPS AL+MEKLLE RI  AI  R N+GLPS
Sbjct: 173 EATRDPSCALNMEKLLETRIDAAIELRRNLGLPS 206


>ref|XP_004139905.1| PREDICTED: ribosomal RNA large subunit methyltransferase I-like
           [Cucumis sativus] gi|449475849|ref|XP_004154569.1|
           PREDICTED: ribosomal RNA large subunit methyltransferase
           I-like [Cucumis sativus]
          Length = 439

 Score =  161 bits (407), Expect = 6e-38
 Identities = 84/127 (66%), Positives = 98/127 (77%), Gaps = 1/127 (0%)
 Frame = -3

Query: 378 MKSSPSSSSICLQEIANT-HXXXXXXXXXXXXVQLFRDGSPMVYSGAVDRIIGRPPPKTG 202
           + SSP++S+I  QEIA+                QLF+DGSPMVYSGAVDRIIGRPPPKTG
Sbjct: 14  ISSSPAASTI--QEIASACPKGLAKVVLKKGKAQLFKDGSPMVYSGAVDRIIGRPPPKTG 71

Query: 201 DIVLVADGTEKPIGWGMYNSVSMFCVRLMQLEEEAAIDPSSALSMEKLLENRIHDAIHFR 22
           D+VLVADGTEKPIGWG+YNSVSMF VRLMQLEEEAA DPS  L++EK++E R+H A   R
Sbjct: 72  DVVLVADGTEKPIGWGLYNSVSMFSVRLMQLEEEAARDPSCTLNVEKMIETRVHTARELR 131

Query: 21  TNMGLPS 1
            N+GLPS
Sbjct: 132 KNLGLPS 138


Top