BLASTX nr result
ID: Aconitum21_contig00012945
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Aconitum21_contig00012945
(410 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279505.2| PREDICTED: chloroplastic group IIA intron sp... 89 5e-25
emb|CBI27903.3| unnamed protein product [Vitis vinifera] 89 5e-25
ref|XP_002309217.1| predicted protein [Populus trichocarpa] gi|2... 86 7e-24
ref|XP_004144114.1| PREDICTED: chloroplastic group IIA intron sp... 69 2e-18
ref|XP_004171699.1| PREDICTED: chloroplastic group IIA intron sp... 69 2e-18
>ref|XP_002279505.2| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Vitis vinifera]
Length = 884
Score = 88.6 bits (218), Expect(2) = 5e-25
Identities = 45/76 (59%), Positives = 56/76 (73%)
Frame = -1
Query: 245 SNVKTAKGQRVAGTLAETLAAKSRWGNDPSVEDMEKMKRDFVSAKHA*LVRYLEKKIVRA 66
S ++AKG VAGTLAETLAA SRWG++PS ED+ KM RD A+HA LVRY+ KK+ A
Sbjct: 594 SKARSAKGPLVAGTLAETLAATSRWGSEPSEEDVGKMIRDSALARHASLVRYVGKKLAHA 653
Query: 65 RDKANRAENALRRVQE 18
+ K + E ALR+VQE
Sbjct: 654 KAKLKKTEKALRKVQE 669
Score = 50.8 bits (120), Expect(2) = 5e-25
Identities = 29/53 (54%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Frame = -2
Query: 406 LTGGTLLSRNTEYIVFY*GNDFLSPR--RCLKGRNRLRPDMKKKREHETELHR 254
LTGGTL+SRN +YIVFY GNDFL P LK R +LR D+++ E + HR
Sbjct: 537 LTGGTLVSRNKDYIVFYRGNDFLPPHVMEALKERRKLR-DLQQDEEEQAR-HR 587
>emb|CBI27903.3| unnamed protein product [Vitis vinifera]
Length = 881
Score = 88.6 bits (218), Expect(2) = 5e-25
Identities = 45/76 (59%), Positives = 56/76 (73%)
Frame = -1
Query: 245 SNVKTAKGQRVAGTLAETLAAKSRWGNDPSVEDMEKMKRDFVSAKHA*LVRYLEKKIVRA 66
S ++AKG VAGTLAETLAA SRWG++PS ED+ KM RD A+HA LVRY+ KK+ A
Sbjct: 591 SKARSAKGPLVAGTLAETLAATSRWGSEPSEEDVGKMIRDSALARHASLVRYVGKKLAHA 650
Query: 65 RDKANRAENALRRVQE 18
+ K + E ALR+VQE
Sbjct: 651 KAKLKKTEKALRKVQE 666
Score = 50.8 bits (120), Expect(2) = 5e-25
Identities = 29/53 (54%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Frame = -2
Query: 406 LTGGTLLSRNTEYIVFY*GNDFLSPR--RCLKGRNRLRPDMKKKREHETELHR 254
LTGGTL+SRN +YIVFY GNDFL P LK R +LR D+++ E + HR
Sbjct: 534 LTGGTLVSRNKDYIVFYRGNDFLPPHVMEALKERRKLR-DLQQDEEEQAR-HR 584
>ref|XP_002309217.1| predicted protein [Populus trichocarpa] gi|222855193|gb|EEE92740.1|
predicted protein [Populus trichocarpa]
Length = 977
Score = 85.9 bits (211), Expect(2) = 7e-24
Identities = 43/76 (56%), Positives = 56/76 (73%)
Frame = -1
Query: 245 SNVKTAKGQRVAGTLAETLAAKSRWGNDPSVEDMEKMKRDFVSAKHA*LVRYLEKKIVRA 66
S+VKT KG VAGTL ET+AA SRWGN PS ED+E+M RD A+HA LV++LE K+ +A
Sbjct: 691 SSVKTTKGPLVAGTLVETVAAISRWGNQPSSEDVEEMIRDSALARHASLVKHLENKLAQA 750
Query: 65 RDKANRAENALRRVQE 18
+ K ++E L +VQE
Sbjct: 751 KGKLKKSEKDLAKVQE 766
Score = 49.7 bits (117), Expect(2) = 7e-24
Identities = 26/38 (68%), Positives = 28/38 (73%), Gaps = 2/38 (5%)
Frame = -2
Query: 409 KLTGGTLLSRNTEYIVFY*GNDFLSP--RRCLKGRNRL 302
+LTGGTLLSRN EYIVFY GNDFL P LK R +L
Sbjct: 633 RLTGGTLLSRNKEYIVFYRGNDFLPPVINETLKERRKL 670
>ref|XP_004144114.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Cucumis sativus]
Length = 846
Score = 69.3 bits (168), Expect(2) = 2e-18
Identities = 35/76 (46%), Positives = 47/76 (61%)
Frame = -1
Query: 245 SNVKTAKGQRVAGTLAETLAAKSRWGNDPSVEDMEKMKRDFVSAKHA*LVRYLEKKIVRA 66
S VK + VAGTL ET+AA SRWG+ PS D+E M+ D AK L+ YL+KK+ A
Sbjct: 606 SKVKASNAPLVAGTLTETIAATSRWGSQPSGHDIENMREDSALAKLDSLIEYLKKKLALA 665
Query: 65 RDKANRAENALRRVQE 18
+ K AE + ++QE
Sbjct: 666 KCKVKNAEKIIAKLQE 681
Score = 47.8 bits (112), Expect(2) = 2e-18
Identities = 25/37 (67%), Positives = 27/37 (72%), Gaps = 2/37 (5%)
Frame = -2
Query: 406 LTGGTLLSRNTEYIVFY*GNDFLSP--RRCLKGRNRL 302
LTGGTLLSRN EYIVFY GND+L P LK R +L
Sbjct: 549 LTGGTLLSRNKEYIVFYRGNDYLPPTITEALKERRKL 585
>ref|XP_004171699.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like, partial [Cucumis sativus]
Length = 789
Score = 69.3 bits (168), Expect(2) = 2e-18
Identities = 35/76 (46%), Positives = 47/76 (61%)
Frame = -1
Query: 245 SNVKTAKGQRVAGTLAETLAAKSRWGNDPSVEDMEKMKRDFVSAKHA*LVRYLEKKIVRA 66
S VK + VAGTL ET+AA SRWG+ PS D+E M+ D AK L+ YL+KK+ A
Sbjct: 549 SKVKASNAPLVAGTLTETIAATSRWGSQPSGHDIENMREDSALAKLDSLIEYLKKKLALA 608
Query: 65 RDKANRAENALRRVQE 18
+ K AE + ++QE
Sbjct: 609 KCKVKNAEKIIAKLQE 624
Score = 47.8 bits (112), Expect(2) = 2e-18
Identities = 25/37 (67%), Positives = 27/37 (72%), Gaps = 2/37 (5%)
Frame = -2
Query: 406 LTGGTLLSRNTEYIVFY*GNDFLSP--RRCLKGRNRL 302
LTGGTLLSRN EYIVFY GND+L P LK R +L
Sbjct: 492 LTGGTLLSRNKEYIVFYRGNDYLPPTITEALKERRKL 528