BLASTX nr result

ID: Aconitum21_contig00012859 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00012859
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281634.1| PREDICTED: U3 small nucleolar RNA-interactin...   115   5e-24
ref|XP_002281628.1| PREDICTED: U3 small nucleolar RNA-interactin...   115   5e-24
emb|CAN60229.1| hypothetical protein VITISV_042496 [Vitis vinifera]   115   5e-24
ref|NP_193845.2| U3-55K-like protein 2 [Arabidopsis thaliana] gi...   109   2e-22
ref|XP_002464179.1| hypothetical protein SORBIDRAFT_01g013700 [S...   108   4e-22

>ref|XP_002281634.1| PREDICTED: U3 small nucleolar RNA-interacting protein 2 isoform 2
           [Vitis vinifera]
          Length = 500

 Score =  115 bits (287), Expect = 5e-24
 Identities = 54/75 (72%), Positives = 64/75 (85%)
 Frame = +3

Query: 3   ASGAGNGLVRLWTVDSDAKRIQPLYGLPLVGFVNSLAFAKSGRFLVAGVGQEQRLGRWGR 182
           ASGA NG VRLW + S+ K I+PL+ LPLVGFVNSLAF+KSG+FLVAGVGQE RLGRWGR
Sbjct: 425 ASGAANGSVRLWAIGSETKDIRPLFNLPLVGFVNSLAFSKSGQFLVAGVGQEPRLGRWGR 484

Query: 183 IPGSQNGVFVQSLNI 227
           +P ++NGV VQSL +
Sbjct: 485 LPAARNGVAVQSLKL 499


>ref|XP_002281628.1| PREDICTED: U3 small nucleolar RNA-interacting protein 2 isoform 1
           [Vitis vinifera] gi|297740813|emb|CBI30995.3| unnamed
           protein product [Vitis vinifera]
          Length = 519

 Score =  115 bits (287), Expect = 5e-24
 Identities = 54/75 (72%), Positives = 64/75 (85%)
 Frame = +3

Query: 3   ASGAGNGLVRLWTVDSDAKRIQPLYGLPLVGFVNSLAFAKSGRFLVAGVGQEQRLGRWGR 182
           ASGA NG VRLW + S+ K I+PL+ LPLVGFVNSLAF+KSG+FLVAGVGQE RLGRWGR
Sbjct: 444 ASGAANGSVRLWAIGSETKDIRPLFNLPLVGFVNSLAFSKSGQFLVAGVGQEPRLGRWGR 503

Query: 183 IPGSQNGVFVQSLNI 227
           +P ++NGV VQSL +
Sbjct: 504 LPAARNGVAVQSLKL 518


>emb|CAN60229.1| hypothetical protein VITISV_042496 [Vitis vinifera]
          Length = 573

 Score =  115 bits (287), Expect = 5e-24
 Identities = 54/75 (72%), Positives = 64/75 (85%)
 Frame = +3

Query: 3   ASGAGNGLVRLWTVDSDAKRIQPLYGLPLVGFVNSLAFAKSGRFLVAGVGQEQRLGRWGR 182
           ASGA NG VRLW + S+ K I+PL+ LPLVGFVNSLAF+KSG+FLVAGVGQE RLGRWGR
Sbjct: 498 ASGAANGSVRLWAIGSETKDIRPLFNLPLVGFVNSLAFSKSGQFLVAGVGQEPRLGRWGR 557

Query: 183 IPGSQNGVFVQSLNI 227
           +P ++NGV VQSL +
Sbjct: 558 LPAARNGVAVQSLKL 572


>ref|NP_193845.2| U3-55K-like protein 2 [Arabidopsis thaliana]
           gi|62910985|gb|AAY21208.1| U3-55K-like protein 2
           [Arabidopsis thaliana] gi|332659006|gb|AEE84406.1|
           U3-55K-like protein 2 [Arabidopsis thaliana]
          Length = 479

 Score =  109 bits (273), Expect = 2e-22
 Identities = 53/75 (70%), Positives = 60/75 (80%)
 Frame = +3

Query: 3   ASGAGNGLVRLWTVDSDAKRIQPLYGLPLVGFVNSLAFAKSGRFLVAGVGQEQRLGRWGR 182
           ASGAGNG VRLW V+S +  IQPLY LPL GFVNSLAFAKSGRFL+AGVGQE RLGRWG 
Sbjct: 404 ASGAGNGCVRLWGVESGSSAIQPLYELPLPGFVNSLAFAKSGRFLIAGVGQEPRLGRWGC 463

Query: 183 IPGSQNGVFVQSLNI 227
           +  +QNGV +  L +
Sbjct: 464 LKSAQNGVAIHPLRL 478


>ref|XP_002464179.1| hypothetical protein SORBIDRAFT_01g013700 [Sorghum bicolor]
           gi|241918033|gb|EER91177.1| hypothetical protein
           SORBIDRAFT_01g013700 [Sorghum bicolor]
          Length = 512

 Score =  108 bits (271), Expect = 4e-22
 Identities = 51/78 (65%), Positives = 62/78 (79%)
 Frame = +3

Query: 3   ASGAGNGLVRLWTVDSDAKRIQPLYGLPLVGFVNSLAFAKSGRFLVAGVGQEQRLGRWGR 182
           ASGAGNGLVRLW V  D+K ++PL+ L L GFVNSLA AKSGRF+VAGVGQE RLGRWGR
Sbjct: 431 ASGAGNGLVRLWAVKPDSKGVEPLFDLKLDGFVNSLAIAKSGRFIVAGVGQEPRLGRWGR 490

Query: 183 IPGSQNGVFVQSLNIVEE 236
           +  +QNGV +  + + +E
Sbjct: 491 VRSAQNGVAIHPIRLKDE 508


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