BLASTX nr result

ID: Aconitum21_contig00012839 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00012839
         (691 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521718.1| heterogeneous nuclear ribonucleoprotein, put...   332   4e-89
ref|XP_002280225.2| PREDICTED: epithelial splicing regulatory pr...   328   6e-88
ref|XP_004134826.1| PREDICTED: heterogeneous nuclear ribonucleop...   326   2e-87
ref|XP_004158841.1| PREDICTED: heterogeneous nuclear ribonucleop...   321   1e-85
emb|CAN70556.1| hypothetical protein VITISV_016468 [Vitis vinifera]   321   1e-85

>ref|XP_002521718.1| heterogeneous nuclear ribonucleoprotein, putative [Ricinus
           communis] gi|223539109|gb|EEF40705.1| heterogeneous
           nuclear ribonucleoprotein, putative [Ricinus communis]
          Length = 264

 Score =  332 bits (851), Expect = 4e-89
 Identities = 170/232 (73%), Positives = 196/232 (84%), Gaps = 3/232 (1%)
 Frame = -3

Query: 689 MYGSR-AMLGSGGFSDGYEIGSKRQRMIESHPYFAVSSGTSNYQPYNYGIEWGSA-FPVV 516
           MYGSR AMLGSGG SDGYE+GSKR RM+ES+PYFAVS G+S +QPY YG  + SA FPVV
Sbjct: 1   MYGSRGAMLGSGGVSDGYEVGSKRPRMMESNPYFAVSGGSSGFQPYGYGGGFQSAPFPVV 60

Query: 515 KLRGLPFDCSDIDIFKFFAGLHIVDVLLVNKNGRFTGEAFVVFANSVQSDCALQRDRQNL 336
           +LRGLPF+C+DIDIFKFFAGL IVDVLLVNKNGRFTGEAFVVFA ++Q + ALQRDRQN+
Sbjct: 61  RLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFTGEAFVVFAGAMQVEFALQRDRQNM 120

Query: 335 GRRYVEVFRCSKQDYYRAVASEVKHDGIYD-EYRGSPPPTSTKRSKKSMDKDQLEQHTDI 159
           GRRYVEVFRC +QDYY AVA+EV ++GIYD +Y GSPPP+  KR     DKDQLE +T+I
Sbjct: 121 GRRYVEVFRCKRQDYYNAVAAEVNYEGIYDTDYHGSPPPSKAKRFS---DKDQLE-YTEI 176

Query: 158 LKMRGLPYSATKSDIIEFFDEFELTEESVHIGRRPDGKATGEAYVEFESVDD 3
           LKMRGLP+SA K +IIEFF EFEL E+ +HI  RPDGKATGEAYVEF S D+
Sbjct: 177 LKMRGLPFSAKKPEIIEFFKEFELVEDRIHIACRPDGKATGEAYVEFASADE 228



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 28/83 (33%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
 Frame = -3

Query: 521 VVKLRGLPFDCSDIDIFKFFAGLHIVDV---LLVNKNGRFTGEAFVVFANSVQSDCALQR 351
           ++K+RGLPF     +I +FF    +V+    +    +G+ TGEA+V FA++ ++  A+ +
Sbjct: 176 ILKMRGLPFSAKKPEIIEFFKEFELVEDRIHIACRPDGKATGEAYVEFASADEAKRAMSK 235

Query: 350 DRQNLGRRYVEVFRCSKQDYYRA 282
           D+  +G RYVE+F  +  +  RA
Sbjct: 236 DKMTIGSRYVELFPSTPDEARRA 258


>ref|XP_002280225.2| PREDICTED: epithelial splicing regulatory protein 2-like [Vitis
           vinifera]
          Length = 264

 Score =  328 bits (841), Expect = 6e-88
 Identities = 167/232 (71%), Positives = 196/232 (84%), Gaps = 3/232 (1%)
 Frame = -3

Query: 689 MYGSR-AMLGSGGFSDGYEIGSKRQRMIESHPYFAVSSGTSNYQPYNYGIEWGS-AFPVV 516
           MYGSR AMLGSGG SDGYEIGSKRQRM+ES+PYFAVSS  S +QPY YG  +    FPVV
Sbjct: 1   MYGSRGAMLGSGGVSDGYEIGSKRQRMMESNPYFAVSSSASGFQPYGYGSGFQPPTFPVV 60

Query: 515 KLRGLPFDCSDIDIFKFFAGLHIVDVLLVNKNGRFTGEAFVVFANSVQSDCALQRDRQNL 336
           +LRGLPF+C+DIDIFKFFAGL IVDVLLVNK+GRF+GEA+VVFA S+Q+D ALQRDRQN+
Sbjct: 61  RLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKSGRFSGEAYVVFAGSMQADFALQRDRQNM 120

Query: 335 GRRYVEVFRCSKQDYYRAVASEVKHDGIYD-EYRGSPPPTSTKRSKKSMDKDQLEQHTDI 159
           GRRYVEVFRC KQDYY AVASEV ++GIYD ++ GSPPP+   RSK+  DKDQ+E HT+I
Sbjct: 121 GRRYVEVFRCKKQDYYHAVASEVNYEGIYDNDFHGSPPPS---RSKRFSDKDQME-HTEI 176

Query: 158 LKMRGLPYSATKSDIIEFFDEFELTEESVHIGRRPDGKATGEAYVEFESVDD 3
           LK+RGLP+S  KS I+EFF +FEL ++ VHI  RPDGKATGEAYVEF S ++
Sbjct: 177 LKLRGLPFSVKKSQILEFFGDFELGDDKVHIACRPDGKATGEAYVEFASAEE 228



 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
 Frame = -3

Query: 521 VVKLRGLPFDCSDIDIFKFFAGLHIVDV---LLVNKNGRFTGEAFVVFANSVQSDCALQR 351
           ++KLRGLPF      I +FF    + D    +    +G+ TGEA+V FA++ ++  A+ +
Sbjct: 176 ILKLRGLPFSVKKSQILEFFGDFELGDDKVHIACRPDGKATGEAYVEFASAEEAKKAMGK 235

Query: 350 DRQNLGRRYVEVFRCSKQDYYRA 282
           D+  +G RYVE+F  +  +  RA
Sbjct: 236 DKMTIGSRYVELFPSTPDEARRA 258


>ref|XP_004134826.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like [Cucumis
           sativus]
          Length = 263

 Score =  326 bits (836), Expect = 2e-87
 Identities = 166/232 (71%), Positives = 193/232 (83%), Gaps = 3/232 (1%)
 Frame = -3

Query: 689 MYGSR-AMLGSGGFSDGYEIGSKRQRMIESHPYFAVSSGTSNYQPYNYG-IEWGSAFPVV 516
           MYG R AMLGSGG SDGYE+GSKRQRM+E +PYFAVSS T+ +QPY YG      AFPVV
Sbjct: 1   MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVV 60

Query: 515 KLRGLPFDCSDIDIFKFFAGLHIVDVLLVNKNGRFTGEAFVVFANSVQSDCALQRDRQNL 336
           +LRGLPF+C+DIDIFKFFAGL IVDVLLVNKNGRF GEAFVVFA SVQ + ALQRDRQN+
Sbjct: 61  RLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNM 120

Query: 335 GRRYVEVFRCSKQDYYRAVASEVKHDGIYD-EYRGSPPPTSTKRSKKSMDKDQLEQHTDI 159
           GRRYVEVFRC +QDYY AVA+EV ++GIYD +Y GSPPP    R K+  DKDQ+E +T+I
Sbjct: 121 GRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPP----RQKRFSDKDQME-YTEI 175

Query: 158 LKMRGLPYSATKSDIIEFFDEFELTEESVHIGRRPDGKATGEAYVEFESVDD 3
           LK+RGLP+S TKS+IIEFF EF+L E+ +HI  RPDGKATGEAYVEF S ++
Sbjct: 176 LKLRGLPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEE 227



 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 28/83 (33%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
 Frame = -3

Query: 521 VVKLRGLPFDCSDIDIFKFFAGLHIVDV---LLVNKNGRFTGEAFVVFANSVQSDCALQR 351
           ++KLRGLPF  +  +I +FF    + +    +    +G+ TGEA+V FA++ ++  A+ +
Sbjct: 175 ILKLRGLPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSK 234

Query: 350 DRQNLGRRYVEVFRCSKQDYYRA 282
           D+  +G RYVE+F  +  +  RA
Sbjct: 235 DKMTIGSRYVELFPSTPNEARRA 257


>ref|XP_004158841.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like [Cucumis
           sativus]
          Length = 256

 Score =  321 bits (822), Expect = 1e-85
 Identities = 161/225 (71%), Positives = 188/225 (83%), Gaps = 2/225 (0%)
 Frame = -3

Query: 671 MLGSGGFSDGYEIGSKRQRMIESHPYFAVSSGTSNYQPYNYG-IEWGSAFPVVKLRGLPF 495
           MLGSGG SDGYE+GSKRQRM+E +PYFAVSS T+ +QPY YG      AFPVV+LRGLPF
Sbjct: 1   MLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPF 60

Query: 494 DCSDIDIFKFFAGLHIVDVLLVNKNGRFTGEAFVVFANSVQSDCALQRDRQNLGRRYVEV 315
           +C+DIDIFKFFAGL IVDVLLVNKNGRF GEAFVVFA SVQ + ALQRDRQN+GRRYVEV
Sbjct: 61  NCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEV 120

Query: 314 FRCSKQDYYRAVASEVKHDGIYD-EYRGSPPPTSTKRSKKSMDKDQLEQHTDILKMRGLP 138
           FRC +QDYY AVA+EV ++GIYD +Y GSPPP    R K+  DKDQ+E +T+ILK+RGLP
Sbjct: 121 FRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPP----RQKRFSDKDQME-YTEILKLRGLP 175

Query: 137 YSATKSDIIEFFDEFELTEESVHIGRRPDGKATGEAYVEFESVDD 3
           +S TKS+IIEFF EF+L E+ +HI  RPDGKATGEAYVEF S ++
Sbjct: 176 FSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEE 220



 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 28/83 (33%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
 Frame = -3

Query: 521 VVKLRGLPFDCSDIDIFKFFAGLHIVDV---LLVNKNGRFTGEAFVVFANSVQSDCALQR 351
           ++KLRGLPF  +  +I +FF    + +    +    +G+ TGEA+V FA++ ++  A+ +
Sbjct: 168 ILKLRGLPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSK 227

Query: 350 DRQNLGRRYVEVFRCSKQDYYRA 282
           D+  +G RYVE+F  +  +  RA
Sbjct: 228 DKMTIGSRYVELFPSTPNEARRA 250


>emb|CAN70556.1| hypothetical protein VITISV_016468 [Vitis vinifera]
          Length = 257

 Score =  321 bits (822), Expect = 1e-85
 Identities = 161/225 (71%), Positives = 190/225 (84%), Gaps = 2/225 (0%)
 Frame = -3

Query: 671 MLGSGGFSDGYEIGSKRQRMIESHPYFAVSSGTSNYQPYNYGIEWGS-AFPVVKLRGLPF 495
           MLGSGG SDGYEIGSKRQRM+ES+PYFAVSS  S +QPY YG  +    FPVV+LRGLPF
Sbjct: 1   MLGSGGVSDGYEIGSKRQRMMESNPYFAVSSSASGFQPYGYGSGFQPPTFPVVRLRGLPF 60

Query: 494 DCSDIDIFKFFAGLHIVDVLLVNKNGRFTGEAFVVFANSVQSDCALQRDRQNLGRRYVEV 315
           +C+DIDIFKFFAGL IVDVLLVNK+GRF+GEA+VVFA S+Q+D ALQRDRQN+GRRYVEV
Sbjct: 61  NCTDIDIFKFFAGLDIVDVLLVNKSGRFSGEAYVVFAGSMQADFALQRDRQNMGRRYVEV 120

Query: 314 FRCSKQDYYRAVASEVKHDGIYD-EYRGSPPPTSTKRSKKSMDKDQLEQHTDILKMRGLP 138
           FRC KQDYY AVASEV ++GIYD ++ GSPPP+   RSK+  DKDQ+E HT+ILK+RGLP
Sbjct: 121 FRCKKQDYYHAVASEVNYEGIYDNDFHGSPPPS---RSKRFSDKDQME-HTEILKLRGLP 176

Query: 137 YSATKSDIIEFFDEFELTEESVHIGRRPDGKATGEAYVEFESVDD 3
           +S  KS I+EFF +FEL ++ VHI  RPDGKATGEAYVEF S ++
Sbjct: 177 FSVKKSQILEFFGDFELGDDKVHIACRPDGKATGEAYVEFASAEE 221



 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
 Frame = -3

Query: 521 VVKLRGLPFDCSDIDIFKFFAGLHIVDV---LLVNKNGRFTGEAFVVFANSVQSDCALQR 351
           ++KLRGLPF      I +FF    + D    +    +G+ TGEA+V FA++ ++  A+ +
Sbjct: 169 ILKLRGLPFSVKKSQILEFFGDFELGDDKVHIACRPDGKATGEAYVEFASAEEAKKAMGK 228

Query: 350 DRQNLGRRYVEVFRCSKQDYYRA 282
           D+  +G RYVE+F  +  +  RA
Sbjct: 229 DKMTIGSRYVELFPSTPDEARRA 251


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