BLASTX nr result

ID: Aconitum21_contig00012821 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00012821
         (547 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32804.3| unnamed protein product [Vitis vinifera]               94   1e-17
ref|XP_002277489.1| PREDICTED: putative SWI/SNF-related matrix-a...    94   1e-17
ref|XP_002308876.1| chromatin remodeling complex subunit [Populu...    86   4e-15
ref|NP_196132.2| DNA/RNA helicase [Arabidopsis thaliana] gi|2026...    83   2e-14
sp|Q9FF61.1|SM3L1_ARATH RecName: Full=Putative SWI/SNF-related m...    83   2e-14

>emb|CBI32804.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 47/63 (74%), Positives = 56/63 (88%)
 Frame = +2

Query: 2   DRVHRIGQTKDVKIVRLINSNSIEERILELQDKKKKLAREAFRKRSGKDSRQIGVEDLRV 181
           DRVHRIGQ +DVKIVRLI  NSIEERILELQ++KKKLA+EAF +R  KD R++GVEDLR+
Sbjct: 750 DRVHRIGQKEDVKIVRLIARNSIEERILELQERKKKLAKEAFGRRGLKDRREVGVEDLRM 809

Query: 182 LMA 190
           LM+
Sbjct: 810 LMS 812


>ref|XP_002277489.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 1-like [Vitis vinifera]
          Length = 874

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 47/63 (74%), Positives = 56/63 (88%)
 Frame = +2

Query: 2   DRVHRIGQTKDVKIVRLINSNSIEERILELQDKKKKLAREAFRKRSGKDSRQIGVEDLRV 181
           DRVHRIGQ +DVKIVRLI  NSIEERILELQ++KKKLA+EAF +R  KD R++GVEDLR+
Sbjct: 811 DRVHRIGQKEDVKIVRLIARNSIEERILELQERKKKLAKEAFGRRGLKDRREVGVEDLRM 870

Query: 182 LMA 190
           LM+
Sbjct: 871 LMS 873


>ref|XP_002308876.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222854852|gb|EEE92399.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 799

 Score = 85.9 bits (211), Expect = 4e-15
 Identities = 40/63 (63%), Positives = 53/63 (84%)
 Frame = +2

Query: 2   DRVHRIGQTKDVKIVRLINSNSIEERILELQDKKKKLAREAFRKRSGKDSRQIGVEDLRV 181
           DRVHRIGQ +DV +VRLI  +SIEERILE+Q++KKKLA+EAF +R  K  R++G++DLR 
Sbjct: 736 DRVHRIGQEEDVTVVRLIAQSSIEERILEMQERKKKLAKEAFGRRGTKTQREVGIDDLRA 795

Query: 182 LMA 190
           LM+
Sbjct: 796 LMS 798


>ref|NP_196132.2| DNA/RNA helicase [Arabidopsis thaliana] gi|20260624|gb|AAM13210.1|
           helicase-like transcription factor-like protein
           [Arabidopsis thaliana] gi|31711770|gb|AAP68241.1|
           At5g05130 [Arabidopsis thaliana]
           gi|332003449|gb|AED90832.1| DNA/RNA helicase
           [Arabidopsis thaliana]
          Length = 862

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 38/63 (60%), Positives = 51/63 (80%)
 Frame = +2

Query: 2   DRVHRIGQTKDVKIVRLINSNSIEERILELQDKKKKLAREAFRKRSGKDSRQIGVEDLRV 181
           DR+HRIGQ ++VK++R+I  NSIEER+LELQ KKK LA EAF++R  KD R++ VED+  
Sbjct: 799 DRIHRIGQKQEVKMIRMIARNSIEERVLELQQKKKNLANEAFKRRQKKDEREVNVEDVVA 858

Query: 182 LMA 190
           LM+
Sbjct: 859 LMS 861


>sp|Q9FF61.1|SM3L1_ARATH RecName: Full=Putative SWI/SNF-related matrix-associated
            actin-dependent regulator of chromatin subfamily A member
            3-like 1; Short=SMARCA3-like protein 1
            gi|10178052|dbj|BAB11535.1| helicase-like transcription
            factor-like protein [Arabidopsis thaliana]
          Length = 881

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 38/63 (60%), Positives = 51/63 (80%)
 Frame = +2

Query: 2    DRVHRIGQTKDVKIVRLINSNSIEERILELQDKKKKLAREAFRKRSGKDSRQIGVEDLRV 181
            DR+HRIGQ ++VK++R+I  NSIEER+LELQ KKK LA EAF++R  KD R++ VED+  
Sbjct: 818  DRIHRIGQKQEVKMIRMIARNSIEERVLELQQKKKNLANEAFKRRQKKDEREVNVEDVVA 877

Query: 182  LMA 190
            LM+
Sbjct: 878  LMS 880


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