BLASTX nr result

ID: Aconitum21_contig00012771 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00012771
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001233788.1| DNA repair protein RAD51 homolog [Solanum ly...   198   4e-49
ref|XP_004144057.1| PREDICTED: DNA repair protein RAD51 homolog ...   195   4e-48
dbj|BAF02935.1| RAD51 homolog [Populus nigra]                         192   2e-47
ref|XP_002516197.1| DNA repair protein rad51, putative [Ricinus ...   187   6e-46
ref|XP_002273803.1| PREDICTED: DNA repair protein RAD51 homolog ...   186   2e-45

>ref|NP_001233788.1| DNA repair protein RAD51 homolog [Solanum lycopersicum]
           gi|2500107|sp|Q40134.1|RAD51_SOLLC RecName: Full=DNA
           repair protein RAD51 homolog gi|1143810|gb|AAC23700.1|
           LeRAD51 [Solanum lycopersicum]
          Length = 342

 Score =  198 bits (503), Expect = 4e-49
 Identities = 99/122 (81%), Positives = 110/122 (90%)
 Frame = -2

Query: 368 MEQQRHNPKMVEDQEEAAQDIASGPFPIEQLQDSGIASIDVKKLKDAGLCTVESVAYSPR 189
           MEQQ  N K ++DQ +  +D+  GPFP+EQLQ SGIA++DVKKLKDAGLCTVESV Y+PR
Sbjct: 1   MEQQHRNQKSMQDQNDEIEDVQHGPFPVEQLQASGIAALDVKKLKDAGLCTVESVVYAPR 60

Query: 188 KELLQIKGISEAKVDKIIEAASKLVPMGFTSAGQLHAQRLEIIQITSGSRELDKILEGGI 9
           KELLQIKGISEAKVDKIIEAASKLVP+GFTSA QLHAQRLEIIQITSGS+ELDKILEGGI
Sbjct: 61  KELLQIKGISEAKVDKIIEAASKLVPLGFTSASQLHAQRLEIIQITSGSKELDKILEGGI 120

Query: 8   ET 3
           ET
Sbjct: 121 ET 122


>ref|XP_004144057.1| PREDICTED: DNA repair protein RAD51 homolog [Cucumis sativus]
           gi|449518135|ref|XP_004166099.1| PREDICTED: DNA repair
           protein RAD51 homolog [Cucumis sativus]
          Length = 340

 Score =  195 bits (495), Expect = 4e-48
 Identities = 104/122 (85%), Positives = 113/122 (92%)
 Frame = -2

Query: 368 MEQQRHNPKMVEDQEEAAQDIASGPFPIEQLQDSGIASIDVKKLKDAGLCTVESVAYSPR 189
           ME+QR N K  E+QEEA  +I  GPFP+EQLQ SGIA++DVKKLKDAGLCTVESVAYSPR
Sbjct: 1   MERQR-NQKPSEEQEEA-DEIQHGPFPVEQLQASGIAAMDVKKLKDAGLCTVESVAYSPR 58

Query: 188 KELLQIKGISEAKVDKIIEAASKLVPMGFTSAGQLHAQRLEIIQITSGSRELDKILEGGI 9
           KELLQIKGISEAKVDKIIEAASK+VP+GFTSAGQLHAQRLEIIQ+TSGSRELDKILEGGI
Sbjct: 59  KELLQIKGISEAKVDKIIEAASKIVPLGFTSAGQLHAQRLEIIQLTSGSRELDKILEGGI 118

Query: 8   ET 3
           ET
Sbjct: 119 ET 120


>dbj|BAF02935.1| RAD51 homolog [Populus nigra]
          Length = 342

 Score =  192 bits (488), Expect = 2e-47
 Identities = 98/122 (80%), Positives = 109/122 (89%)
 Frame = -2

Query: 368 MEQQRHNPKMVEDQEEAAQDIASGPFPIEQLQDSGIASIDVKKLKDAGLCTVESVAYSPR 189
           MEQQR+   + + Q E  +++  GPFP+EQLQ SGIAS+DVKKLKDAGLCTVESVA+SPR
Sbjct: 1   MEQQRNQKAVNQQQHEDHEEVQHGPFPVEQLQASGIASLDVKKLKDAGLCTVESVAFSPR 60

Query: 188 KELLQIKGISEAKVDKIIEAASKLVPMGFTSAGQLHAQRLEIIQITSGSRELDKILEGGI 9
           KELLQIKGISEAKVDKIIEAASKLVP+GFTSA QLHAQR EIIQITSGSRELDKILEGG+
Sbjct: 61  KELLQIKGISEAKVDKIIEAASKLVPLGFTSASQLHAQRQEIIQITSGSRELDKILEGGV 120

Query: 8   ET 3
           ET
Sbjct: 121 ET 122


>ref|XP_002516197.1| DNA repair protein rad51, putative [Ricinus communis]
           gi|223544683|gb|EEF46199.1| DNA repair protein rad51,
           putative [Ricinus communis]
          Length = 294

 Score =  187 bits (476), Expect = 6e-46
 Identities = 99/124 (79%), Positives = 109/124 (87%)
 Frame = -2

Query: 374 VAMEQQRHNPKMVEDQEEAAQDIASGPFPIEQLQDSGIASIDVKKLKDAGLCTVESVAYS 195
           +A +QQR   K  + + +  Q    GPFP+EQLQ+SGIA++DVKKLKDAGLCTVESVAYS
Sbjct: 1   MAHQQQRQQQKQPQAELDEMQH---GPFPVEQLQESGIAALDVKKLKDAGLCTVESVAYS 57

Query: 194 PRKELLQIKGISEAKVDKIIEAASKLVPMGFTSAGQLHAQRLEIIQITSGSRELDKILEG 15
           PRKELLQIKGISEAKVDKIIEAASKLVP+GFTSA QLHAQRLEIIQITSGSRELDKILEG
Sbjct: 58  PRKELLQIKGISEAKVDKIIEAASKLVPLGFTSASQLHAQRLEIIQITSGSRELDKILEG 117

Query: 14  GIET 3
           GIET
Sbjct: 118 GIET 121


>ref|XP_002273803.1| PREDICTED: DNA repair protein RAD51 homolog [Vitis vinifera]
           gi|297738498|emb|CBI27743.3| unnamed protein product
           [Vitis vinifera]
          Length = 337

 Score =  186 bits (472), Expect = 2e-45
 Identities = 98/122 (80%), Positives = 108/122 (88%)
 Frame = -2

Query: 368 MEQQRHNPKMVEDQEEAAQDIASGPFPIEQLQDSGIASIDVKKLKDAGLCTVESVAYSPR 189
           MEQQ    KM +  EE  +D+  GPFP+E LQ SGIAS+D+KKLKDAGLCTVESVAYSPR
Sbjct: 1   MEQQ----KMAQAHEEV-EDMQHGPFPVEHLQASGIASLDIKKLKDAGLCTVESVAYSPR 55

Query: 188 KELLQIKGISEAKVDKIIEAASKLVPMGFTSAGQLHAQRLEIIQITSGSRELDKILEGGI 9
           K+LLQIKGISEAKVDKI+EAASKLVP+GFTSA QLHAQRLEIIQITSGSRELDKILEGG+
Sbjct: 56  KDLLQIKGISEAKVDKIVEAASKLVPLGFTSASQLHAQRLEIIQITSGSRELDKILEGGL 115

Query: 8   ET 3
           ET
Sbjct: 116 ET 117


Top