BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00012753
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279047.1| PREDICTED: mediator of RNA polymerase II tra...   145   3e-33
ref|XP_004146891.1| PREDICTED: mediator of RNA polymerase II tra...   144   6e-33
ref|XP_002321780.1| predicted protein [Populus trichocarpa] gi|2...   137   7e-31
gb|AFK36513.1| unknown [Medicago truncatula]                          136   2e-30
ref|XP_002339509.1| predicted protein [Populus trichocarpa] gi|2...   134   6e-30

>ref|XP_002279047.1| PREDICTED: mediator of RNA polymerase II transcription subunit 31
           [Vitis vinifera] gi|297737389|emb|CBI26590.3| unnamed
           protein product [Vitis vinifera]
          Length = 198

 Score =  145 bits (366), Expect = 3e-33
 Identities = 71/122 (58%), Positives = 84/122 (68%), Gaps = 2/122 (1%)
 Frame = -2

Query: 369 ELLSDVRYPHCLYFLELLQNANFRNAMAHPGSKELAHRQQFFFWKHYRNNRLKHIVPRPL 190
           E +  + YPHCL+FLELLQNANFRNAMAHPGSKELAHRQQFF+WK+YRNNRLKHI+P+PL
Sbjct: 75  EYIKFIMYPHCLFFLELLQNANFRNAMAHPGSKELAHRQQFFYWKNYRNNRLKHILPKPL 134

Query: 189 PEXXXXXXXXXXXXXXXXXXXXXXXXT--QALSPMQFGVPPVPAIAKNDMRNMGGDRRKR 16
           PE                            ALSPMQ+G+P   +++KNDMRN   DRRKR
Sbjct: 135 PEPLAGTPAPGPPPQSAPPTTIAVTSAGSPALSPMQYGIPAGSSLSKNDMRNSAIDRRKR 194

Query: 15  KE 10
           K+
Sbjct: 195 KK 196


>ref|XP_004146891.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           31-like [Cucumis sativus]
          Length = 206

 Score =  144 bits (364), Expect = 6e-33
 Identities = 70/125 (56%), Positives = 83/125 (66%), Gaps = 6/125 (4%)
 Frame = -2

Query: 369 ELLSDVRYPHCLYFLELLQNANFRNAMAHPGSKELAHRQQFFFWKHYRNNRLKHIVPRPL 190
           E +  + YPHCL+FLELLQN+NFRNAMAHPG+KELAHRQQF+FWK+YRNNRLKHI+PRPL
Sbjct: 76  EYIKFIMYPHCLFFLELLQNSNFRNAMAHPGNKELAHRQQFYFWKNYRNNRLKHILPRPL 135

Query: 189 PE------XXXXXXXXXXXXXXXXXXXXXXXXTQALSPMQFGVPPVPAIAKNDMRNMGGD 28
           PE                                ALSP+Q+G+PP P + KNDM+  G D
Sbjct: 136 PEPAALPPPVTAPPQAAVPAPTSAPNMAASPAAPALSPIQYGIPPGPGLPKNDMKGAGID 195

Query: 27  RRKRK 13
           RRKRK
Sbjct: 196 RRKRK 200


>ref|XP_002321780.1| predicted protein [Populus trichocarpa] gi|222868776|gb|EEF05907.1|
           predicted protein [Populus trichocarpa]
          Length = 191

 Score =  137 bits (346), Expect = 7e-31
 Identities = 69/128 (53%), Positives = 80/128 (62%), Gaps = 9/128 (7%)
 Frame = -2

Query: 369 ELLSDVRYPHCLYFLELLQNANFRNAMAHPGSKELAHRQQFFFWKHYRNNRLKHIVPRPL 190
           E +  + YPHCLYFLELLQNANFRNAMAHPG+KELAHRQQFFFWK+YRNNRLKHI+PRPL
Sbjct: 64  EYMKFIMYPHCLYFLELLQNANFRNAMAHPGNKELAHRQQFFFWKNYRNNRLKHILPRPL 123

Query: 189 PEXXXXXXXXXXXXXXXXXXXXXXXXTQ---------ALSPMQFGVPPVPAIAKNDMRNM 37
           PE                                     SPM +G+PP  A  K+D+R+ 
Sbjct: 124 PEPAAAPPAPAPPPPLPVQPVPPVPAATHGMLAASGAVPSPMPYGMPPGSAFGKSDIRSS 183

Query: 36  GGDRRKRK 13
           G +RRKRK
Sbjct: 184 GSERRKRK 191


>gb|AFK36513.1| unknown [Medicago truncatula]
          Length = 204

 Score =  136 bits (342), Expect = 2e-30
 Identities = 70/129 (54%), Positives = 79/129 (61%), Gaps = 10/129 (7%)
 Frame = -2

Query: 369 ELLSDVRYPHCLYFLELLQNANFRNAMAHPGSKELAHRQQFFFWKHYRNNRLKHIVPRPL 190
           E +  + YPHCLYFLELLQNANFRNAMAHP +KEL HRQQF+FWK+YRNNRLKHI+PR L
Sbjct: 76  EYIKFIMYPHCLYFLELLQNANFRNAMAHPTNKELTHRQQFYFWKNYRNNRLKHILPRSL 135

Query: 189 PE----------XXXXXXXXXXXXXXXXXXXXXXXXTQALSPMQFGVPPVPAIAKNDMRN 40
            E                                  +QA SPM +G+PP   IAKNDMRN
Sbjct: 136 AEPSAALPAPASTQPQPPVPALPPVPATSVAVTTSSSQAPSPMPYGIPPGSGIAKNDMRN 195

Query: 39  MGGDRRKRK 13
              DRRKRK
Sbjct: 196 TSADRRKRK 204


>ref|XP_002339509.1| predicted protein [Populus trichocarpa] gi|222832585|gb|EEE71062.1|
           predicted protein [Populus trichocarpa]
          Length = 182

 Score =  134 bits (338), Expect = 6e-30
 Identities = 68/119 (57%), Positives = 75/119 (63%), Gaps = 5/119 (4%)
 Frame = -2

Query: 354 VRYPHCLYFLELLQNANFRNAMAHPGSKELAHRQQFFFWKHYRNNRLKHIVPRPLPEXXX 175
           + YPHCLYFLELLQNANFRNAMAHPG+KELAHRQQFFFWK+YRNNRLKHI+PRPLPE   
Sbjct: 64  IMYPHCLYFLELLQNANFRNAMAHPGNKELAHRQQFFFWKNYRNNRLKHILPRPLPEPVT 123

Query: 174 XXXXXXXXXXXXXXXXXXXXXTQALSPMQFGVPPVP-----AIAKNDMRNMGGDRRKRK 13
                                     P   G  P+P     A  K+D+RN G DRRKRK
Sbjct: 124 APPALAPPPQTPVQPVPPVSAATLGMPAAPGAVPLPMPPGSAFGKSDIRNSGSDRRKRK 182