BLASTX nr result

ID: Aconitum21_contig00012721 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00012721
         (632 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279575.1| PREDICTED: ribosome biogenesis protein WDR12...   286   3e-75
ref|XP_002526121.1| WD-repeat protein, putative [Ricinus communi...   277   1e-72
ref|XP_003524849.1| PREDICTED: ribosome biogenesis protein WDR12...   274   1e-71
ref|XP_002324109.1| predicted protein [Populus trichocarpa] gi|2...   269   4e-70
ref|XP_003625440.1| Ribosome biogenesis protein wdr12 [Medicago ...   268   6e-70

>ref|XP_002279575.1| PREDICTED: ribosome biogenesis protein WDR12 homolog [Vitis
           vinifera] gi|296082215|emb|CBI21220.3| unnamed protein
           product [Vitis vinifera]
          Length = 438

 Score =  286 bits (731), Expect = 3e-75
 Identities = 131/195 (67%), Positives = 157/195 (80%)
 Frame = -1

Query: 587 LTGCYDSFGRIWKGDGVCTHILEGHKDAITSVSVFNPKGVESKSSLHIATASKDRTLRLW 408
           LTGCYD  GR+WK  G CTHILEGH DAITSV   +PKG+ES ++  +ATASKDRTLRLW
Sbjct: 127 LTGCYDGLGRLWKAAGSCTHILEGHNDAITSVKFIDPKGLESVNNSVVATASKDRTLRLW 186

Query: 407 KFDAEESFKHPRKITAYKVLEGHKAAVQSVVSHPSGEMVCSGSWDSTISLWRTNESDAEG 228
           KFDA E    P KI A+K+L GH A+VQSV   P+G MVCSGSWD TI+LWRT+E D EG
Sbjct: 187 KFDAGERHDLPLKIRAFKILHGHNASVQSVAVQPTGNMVCSGSWDCTINLWRTDEFDVEG 246

Query: 227 NEASIKKRKVGTDSQESQLQGKAESTFVGHTQCVSSVVWPENETIYSASWDHSIRRWDIE 48
           +  S+KKRKV  +++ESQ +G+A ST VGHTQCVSSV+WP++ETIYSASWDHS+RRWD+E
Sbjct: 247 DLVSVKKRKVNNEAEESQAEGEAVSTIVGHTQCVSSVIWPQHETIYSASWDHSVRRWDVE 306

Query: 47  SGKDSLNVFTGKVLN 3
           +GKDS N+F GK LN
Sbjct: 307 TGKDSWNLFCGKALN 321


>ref|XP_002526121.1| WD-repeat protein, putative [Ricinus communis]
           gi|223534618|gb|EEF36315.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 401

 Score =  277 bits (708), Expect = 1e-72
 Identities = 128/195 (65%), Positives = 153/195 (78%)
 Frame = -1

Query: 587 LTGCYDSFGRIWKGDGVCTHILEGHKDAITSVSVFNPKGVESKSSLHIATASKDRTLRLW 408
           LTGCYD  GR+WK  GVCTHILEGH DA+TSV++ NP G+++ +   + TASKD+TLRLW
Sbjct: 123 LTGCYDGLGRVWKAAGVCTHILEGHSDAVTSVNIMNPGGLDTVT---VVTASKDQTLRLW 179

Query: 407 KFDAEESFKHPRKITAYKVLEGHKAAVQSVVSHPSGEMVCSGSWDSTISLWRTNESDAEG 228
           KFD EE   H  K+TA+KVL GH A+VQSV +  SG M+CSGSWD TI+LWRTNE + EG
Sbjct: 180 KFDTEEPGNHLTKLTAFKVLRGHNASVQSVAAEASGSMICSGSWDCTINLWRTNELNTEG 239

Query: 227 NEASIKKRKVGTDSQESQLQGKAESTFVGHTQCVSSVVWPENETIYSASWDHSIRRWDIE 48
              SIKKRKV  +++ESQL+G+A ST VGHTQCVSSVVWPE ETIYSASWDHS+R WD E
Sbjct: 240 ELVSIKKRKVKNETEESQLEGEALSTLVGHTQCVSSVVWPERETIYSASWDHSVRHWDAE 299

Query: 47  SGKDSLNVFTGKVLN 3
           +GKD   +F GK LN
Sbjct: 300 TGKDLSKIFCGKALN 314


>ref|XP_003524849.1| PREDICTED: ribosome biogenesis protein WDR12 homolog [Glycine max]
          Length = 427

 Score =  274 bits (700), Expect = 1e-71
 Identities = 126/195 (64%), Positives = 157/195 (80%)
 Frame = -1

Query: 587 LTGCYDSFGRIWKGDGVCTHILEGHKDAITSVSVFNPKGVESKSSLHIATASKDRTLRLW 408
           LTGCYD  GR+WKG G+CTHIL+GH DA+TSVS+ NPKG E+ +   +ATASKDRTLRLW
Sbjct: 120 LTGCYDGLGRVWKGAGLCTHILDGHSDAVTSVSIINPKGAETVT---VATASKDRTLRLW 176

Query: 407 KFDAEESFKHPRKITAYKVLEGHKAAVQSVVSHPSGEMVCSGSWDSTISLWRTNESDAEG 228
           K + E+   HP ++ AYK+L GHK++VQSV    SGEMVCSGSWD TI+LW+TN+ +AE 
Sbjct: 177 KLNTEDPVNHPMRVRAYKILRGHKSSVQSVAVQTSGEMVCSGSWDCTINLWQTNDFNAED 236

Query: 227 NEASIKKRKVGTDSQESQLQGKAESTFVGHTQCVSSVVWPENETIYSASWDHSIRRWDIE 48
           ++ S KKRKVG   +ESQL+G+A +T VGHTQCVSSVVWP+ E IYSASWDHSIR+WD+E
Sbjct: 237 DQVS-KKRKVGGQVEESQLEGEAFTTLVGHTQCVSSVVWPQRELIYSASWDHSIRKWDVE 295

Query: 47  SGKDSLNVFTGKVLN 3
            GK+  ++F GKVLN
Sbjct: 296 IGKNLTDIFCGKVLN 310


>ref|XP_002324109.1| predicted protein [Populus trichocarpa] gi|222867111|gb|EEF04242.1|
           predicted protein [Populus trichocarpa]
          Length = 433

 Score =  269 bits (687), Expect = 4e-70
 Identities = 129/195 (66%), Positives = 147/195 (75%)
 Frame = -1

Query: 587 LTGCYDSFGRIWKGDGVCTHILEGHKDAITSVSVFNPKGVESKSSLHIATASKDRTLRLW 408
           LTGCYD+ GR+WK  G CTHILEGH  AITSVSV N +G +S +   +ATASKD TLRLW
Sbjct: 125 LTGCYDNLGRVWKAAGECTHILEGHGGAITSVSVVNSEGTDSVT---VATASKDETLRLW 181

Query: 407 KFDAEESFKHPRKITAYKVLEGHKAAVQSVVSHPSGEMVCSGSWDSTISLWRTNESDAEG 228
           KFD EE    P KI A+K+L GH A VQSV +  SG M+CSGSWD TI+LWRTNESD E 
Sbjct: 182 KFDTEEHLDQPSKIRAFKILRGHNAPVQSVAAEASGSMICSGSWDCTINLWRTNESDTES 241

Query: 227 NEASIKKRKVGTDSQESQLQGKAESTFVGHTQCVSSVVWPENETIYSASWDHSIRRWDIE 48
           +  SIKKRKV   + ESQL+G A ST VGHTQCVSSV WPE  TIYSASWDHS+RRWD+E
Sbjct: 242 DLVSIKKRKVKNKAGESQLEGGALSTLVGHTQCVSSVYWPEPNTIYSASWDHSVRRWDVE 301

Query: 47  SGKDSLNVFTGKVLN 3
            GKD  N+F GK L+
Sbjct: 302 MGKDLSNIFCGKALH 316


>ref|XP_003625440.1| Ribosome biogenesis protein wdr12 [Medicago truncatula]
           gi|355500455|gb|AES81658.1| Ribosome biogenesis protein
           wdr12 [Medicago truncatula]
          Length = 463

 Score =  268 bits (685), Expect = 6e-70
 Identities = 121/195 (62%), Positives = 158/195 (81%)
 Frame = -1

Query: 587 LTGCYDSFGRIWKGDGVCTHILEGHKDAITSVSVFNPKGVESKSSLHIATASKDRTLRLW 408
           LTGCYD FGR+W+G G+CTHILEGH D +TSVSV NP+GVE+ +   +ATASKDRTLRLW
Sbjct: 156 LTGCYDGFGRVWEGAGLCTHILEGHSDGVTSVSVINPEGVETVT---LATASKDRTLRLW 212

Query: 407 KFDAEESFKHPRKITAYKVLEGHKAAVQSVVSHPSGEMVCSGSWDSTISLWRTNESDAEG 228
           K + EE+  HP ++ AYK+L GHK++VQSV +  +GEM+CSGSWD TI+LW+ N+++AE 
Sbjct: 213 KINTEEATNHPARVRAYKILRGHKSSVQSVAAQTNGEMICSGSWDCTINLWQINDTNAE- 271

Query: 227 NEASIKKRKVGTDSQESQLQGKAESTFVGHTQCVSSVVWPENETIYSASWDHSIRRWDIE 48
           N+   KKRKV    ++SQL+G+A +T VGHTQCVSSV+WP+ E+IYSASWDHSIR+WD+E
Sbjct: 272 NDLVSKKRKVDGRVEDSQLEGEAFTTLVGHTQCVSSVIWPQRESIYSASWDHSIRKWDVE 331

Query: 47  SGKDSLNVFTGKVLN 3
            GK+  ++F GK LN
Sbjct: 332 KGKNVTDIFCGKALN 346


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