BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00012714
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein...    72   5e-11
ref|XP_002326116.1| PAF1 complex component [Populus trichocarpa]...    59   5e-07

>ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Vitis
            vinifera] gi|297738576|emb|CBI27821.3| unnamed protein
            product [Vitis vinifera]
          Length = 1091

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 38/73 (52%), Positives = 50/73 (68%)
 Frame = -3

Query: 359  DDTNQMNEEGHNGEENPQDLLAAAGLXXXXXXXXXXEGPSSALNRRRRAWSESDEEEPSD 180
            + TNQMN +  +GE++ QDLLAAAGL           GPSS  NRR+RAWSESDE+EP D
Sbjct: 995  ESTNQMNNQDDDGEDDAQDLLAAAGLEDSDAEDDMA-GPSSG-NRRKRAWSESDEDEPQD 1052

Query: 179  RKLDSDPNKDNVA 141
            ++ +S P ++N A
Sbjct: 1053 QRPESSPVRENSA 1065


>ref|XP_002326116.1| PAF1 complex component [Populus trichocarpa]
            gi|222833309|gb|EEE71786.1| PAF1 complex component
            [Populus trichocarpa]
          Length = 1056

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 37/74 (50%), Positives = 44/74 (59%), Gaps = 8/74 (10%)
 Frame = -3

Query: 362  EDDTN--------QMNEEGHNGEENPQDLLAAAGLXXXXXXXXXXEGPSSALNRRRRAWS 207
            +DD N        QMN++  N EEN QD+LAAAGL            PSSA  RR+RAWS
Sbjct: 984  DDDANVNFREPGYQMNDQDDNAEENAQDVLAAAGL-EDSDADDDAAAPSSA-GRRKRAWS 1041

Query: 206  ESDEEEPSDRKLDS 165
            ESDE+E S+RK  S
Sbjct: 1042 ESDEDEISERKPQS 1055