BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00012692
         (1318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containi...   674   0.0  
emb|CBI21289.3| unnamed protein product [Vitis vinifera]              674   0.0  
ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226...   650   0.0  
ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212...   650   0.0  
ref|XP_003624481.1| Pentatricopeptide repeat-containing protein ...   638   e-180

>ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
            mitochondrial-like [Vitis vinifera]
          Length = 735

 Score =  674 bits (1740), Expect = 0.0
 Identities = 313/404 (77%), Positives = 361/404 (89%)
 Frame = +1

Query: 1    SMIAIYAQNGLSMEALEVFYGMLMERKIKYNEVTLSAVLLACAHAGAWQLGQCIHDQVIK 180
            S+IA+YAQNG+S E++E+F+ M+ + +I YN VTLSAVLLACAH+G+ +LG+CIHDQVIK
Sbjct: 332  SIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIK 391

Query: 181  TGLEENVFIGTSVIDMYCKCGRVEMARKVFNCMKEKNVKSWTAMLSGYGMHGRAREALQV 360
             GLE NVF+GTS+IDMYCKCG+VEMARK F+ M+EKNVKSW+AM++GYGMHG A+EAL+V
Sbjct: 392  MGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEV 451

Query: 361  FYEMQREGVKPNYITFVGILAACSHAGLLEEGRHWFQTMNQDFGIEPGMEHYGCMVDLLG 540
            FYEM   GVKPNYITFV +LAACSHAGLLEEG HWF+ M+ +F +EPG+EHYGCMVDLLG
Sbjct: 452  FYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLG 511

Query: 541  RAGYLNEAYCLIKGMKTKPDFVVWGALLAACKIHKNVELGEISARKLFELDPNNCGYYVL 720
            RAGYL EA+ LIKGMK +PDFVVWGALL AC++HKNV+LGEISARKLFELDP NCGYYVL
Sbjct: 512  RAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVL 571

Query: 721  LSNIYADAGRWVDVERMRVFMKSHGLVKPPGFSLVEAKGRVHVFLVGDRHHPQHDEIYKY 900
            LSNIYADAGRW DVERMR+ MK+ GLVKPPGFSLV+ KGRVHVFLVGDR HPQH++IY+Y
Sbjct: 572  LSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEY 631

Query: 901  LEKLAIKMQAVGYVPDTTSVFHDVDQEEKETVLRVHSEKLAVVFGIMNSVPGTTIQVIKN 1080
            LEKL++K+Q VGYVPD TSV HDV  EEKE VLRVHSEKLAV FGIMN+VPGTTI +IKN
Sbjct: 632  LEKLSMKLQEVGYVPDMTSVLHDVGHEEKEMVLRVHSEKLAVAFGIMNTVPGTTIHIIKN 691

Query: 1081 LRVCGDCHTAIKFLSMIANRVIVVRDSNRFHQFRDGLCSCGDYW 1212
            LRVCGDCHTAIKF+S I +R IVVRDS RFH FRDGLCSCGDYW
Sbjct: 692  LRVCGDCHTAIKFISKIVDREIVVRDSKRFHHFRDGLCSCGDYW 735



 Score = 95.9 bits (237), Expect = 2e-17
 Identities = 58/222 (26%), Positives = 118/222 (53%), Gaps = 8/222 (3%)
 Frame = +1

Query: 1   SMIAIYAQNGLSMEALEVFYGMLMER-------KIKYNEVTLSAVLLACAHAGAWQLGQC 159
           SMI  Y QN  +  AL +F   L+E        ++  + + + +VL AC+      + + 
Sbjct: 223 SMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEG 282

Query: 160 IHDQVIKTGLEENVFIGTSVIDMYCKCGRVEMARKVFNCMKEKNVKSWTAMLSGYGMHGR 339
           +H  +IK G E ++ +  +++D Y KCG + ++R+VF+ M E++V SW ++++ Y  +G 
Sbjct: 283 VHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGM 342

Query: 340 AREALQVFYEMQREG-VKPNYITFVGILAACSHAGLLEEGRHWFQTMNQDFGIEPGMEHY 516
           + E++++F+ M ++G +  N +T   +L AC+H+G    G+     + +  G+E  +   
Sbjct: 343 STESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIK-MGLESNVFVG 401

Query: 517 GCMVDLLGRAGYLNEAYCLIKGMKTKPDFVVWGALLAACKIH 642
             ++D+  + G +  A      M+ K +   W A++A   +H
Sbjct: 402 TSIIDMYCKCGKVEMARKAFDRMREK-NVKSWSAMVAGYGMH 442



 Score = 93.6 bits (231), Expect = 1e-16
 Identities = 65/219 (29%), Positives = 113/219 (51%), Gaps = 10/219 (4%)
 Frame = +1

Query: 1   SMIAIYAQNGLSMEALEVFYGMLMERKIKYNEVTLSAVLLACAHAGAWQLGQCIHDQVIK 180
           S+IA  A++G S+EAL  F  M  +  +K N  T    + +C+       G+  H Q + 
Sbjct: 122 SVIAELARSGDSVEALRAFSSM-RKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQALI 180

Query: 181 TGLEENVFIGTSVIDMYCKCGRVEMARKVFNCMKEKNVKSWTAMLSGYGMHGRAREALQV 360
            G E ++F+ ++++DMY KCG +  AR +F+ +  +N+ SWT+M++GY  +  A  AL +
Sbjct: 181 FGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALLL 240

Query: 361 FYEMQRE--------GVKPNYITFVGILAACSHAG--LLEEGRHWFQTMNQDFGIEPGME 510
           F E   E         V  + I  V +L+ACS      + EG H F  + + F  + G+E
Sbjct: 241 FKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGF-LIKRGFEGDLGVE 299

Query: 511 HYGCMVDLLGRAGYLNEAYCLIKGMKTKPDFVVWGALLA 627
           +   ++D   + G L  +  +  GM  + D + W +++A
Sbjct: 300 N--TLMDAYAKCGELGVSRRVFDGMAER-DVISWNSIIA 335


>emb|CBI21289.3| unnamed protein product [Vitis vinifera]
          Length = 581

 Score =  674 bits (1740), Expect = 0.0
 Identities = 313/404 (77%), Positives = 361/404 (89%)
 Frame = +1

Query: 1    SMIAIYAQNGLSMEALEVFYGMLMERKIKYNEVTLSAVLLACAHAGAWQLGQCIHDQVIK 180
            S+IA+YAQNG+S E++E+F+ M+ + +I YN VTLSAVLLACAH+G+ +LG+CIHDQVIK
Sbjct: 178  SIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIK 237

Query: 181  TGLEENVFIGTSVIDMYCKCGRVEMARKVFNCMKEKNVKSWTAMLSGYGMHGRAREALQV 360
             GLE NVF+GTS+IDMYCKCG+VEMARK F+ M+EKNVKSW+AM++GYGMHG A+EAL+V
Sbjct: 238  MGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEV 297

Query: 361  FYEMQREGVKPNYITFVGILAACSHAGLLEEGRHWFQTMNQDFGIEPGMEHYGCMVDLLG 540
            FYEM   GVKPNYITFV +LAACSHAGLLEEG HWF+ M+ +F +EPG+EHYGCMVDLLG
Sbjct: 298  FYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLG 357

Query: 541  RAGYLNEAYCLIKGMKTKPDFVVWGALLAACKIHKNVELGEISARKLFELDPNNCGYYVL 720
            RAGYL EA+ LIKGMK +PDFVVWGALL AC++HKNV+LGEISARKLFELDP NCGYYVL
Sbjct: 358  RAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVL 417

Query: 721  LSNIYADAGRWVDVERMRVFMKSHGLVKPPGFSLVEAKGRVHVFLVGDRHHPQHDEIYKY 900
            LSNIYADAGRW DVERMR+ MK+ GLVKPPGFSLV+ KGRVHVFLVGDR HPQH++IY+Y
Sbjct: 418  LSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEY 477

Query: 901  LEKLAIKMQAVGYVPDTTSVFHDVDQEEKETVLRVHSEKLAVVFGIMNSVPGTTIQVIKN 1080
            LEKL++K+Q VGYVPD TSV HDV  EEKE VLRVHSEKLAV FGIMN+VPGTTI +IKN
Sbjct: 478  LEKLSMKLQEVGYVPDMTSVLHDVGHEEKEMVLRVHSEKLAVAFGIMNTVPGTTIHIIKN 537

Query: 1081 LRVCGDCHTAIKFLSMIANRVIVVRDSNRFHQFRDGLCSCGDYW 1212
            LRVCGDCHTAIKF+S I +R IVVRDS RFH FRDGLCSCGDYW
Sbjct: 538  LRVCGDCHTAIKFISKIVDREIVVRDSKRFHHFRDGLCSCGDYW 581



 Score = 89.7 bits (221), Expect = 1e-15
 Identities = 61/246 (24%), Positives = 117/246 (47%), Gaps = 32/246 (13%)
 Frame = +1

Query: 1   SMIAIYAQNGLSMEALEVFYGMLMERKIKYNEVTLSAVLLACAHAGAWQLGQCIHDQVIK 180
           S+IA  A++G S+EAL  F  M  +  +K N  T    + +C+       G+  H Q + 
Sbjct: 46  SVIAELARSGDSVEALRAFSSM-RKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQALI 104

Query: 181 TGLEENVFIGTSVIDMYCKCGRVEMARKVFNCMKEKNVKSWTAMLSG------------- 321
            G E ++F+ ++++DMY KCG +  AR +F+ +  +N+ SWT+M++G             
Sbjct: 105 FGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALRV 164

Query: 322 ------------------YGMHGRAREALQVFYEMQREG-VKPNYITFVGILAACSHAGL 444
                             Y  +G + E++++F+ M ++G +  N +T   +L AC+H+G 
Sbjct: 165 FDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGS 224

Query: 445 LEEGRHWFQTMNQDFGIEPGMEHYGCMVDLLGRAGYLNEAYCLIKGMKTKPDFVVWGALL 624
              G+     + +  G+E  +     ++D+  + G +  A      M+ K +   W A++
Sbjct: 225 QRLGKCIHDQVIK-MGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREK-NVKSWSAMV 282

Query: 625 AACKIH 642
           A   +H
Sbjct: 283 AGYGMH 288


>ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
          Length = 1725

 Score =  650 bits (1677), Expect = 0.0
 Identities = 303/404 (75%), Positives = 349/404 (86%)
 Frame = +1

Query: 1    SMIAIYAQNGLSMEALEVFYGMLMERKIKYNEVTLSAVLLACAHAGAWQLGQCIHDQVIK 180
            SMIA+YAQ+GLS EALEVF+GM+    ++YN VTLSAVLLACAHAGA + G+CIHDQVIK
Sbjct: 1322 SMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIK 1381

Query: 181  TGLEENVFIGTSVIDMYCKCGRVEMARKVFNCMKEKNVKSWTAMLSGYGMHGRAREALQV 360
              LE NV +GTS+IDMYCKCGRVEMA+K F+ MKEKNVKSWTAM++GYGMHGRA+EAL +
Sbjct: 1382 MDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDI 1441

Query: 361  FYEMQREGVKPNYITFVGILAACSHAGLLEEGRHWFQTMNQDFGIEPGMEHYGCMVDLLG 540
            FY+M R GVKPNYITFV +LAACSHAGL+EEG HWF  M   + IEPG+EHYGCMVDL G
Sbjct: 1442 FYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFG 1501

Query: 541  RAGYLNEAYCLIKGMKTKPDFVVWGALLAACKIHKNVELGEISARKLFELDPNNCGYYVL 720
            RAG LNEAY LIK MK KPDFVVWG+LL AC+IHKNV+LGEI+A+KLFELDP+NCGYYVL
Sbjct: 1502 RAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVL 1561

Query: 721  LSNIYADAGRWVDVERMRVFMKSHGLVKPPGFSLVEAKGRVHVFLVGDRHHPQHDEIYKY 900
            LSN+YADAGRW DVERMR+ MK+  LVKPPGFSLVE KGRVHVFLVGD+ HP H+ IYKY
Sbjct: 1562 LSNLYADAGRWADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKY 1621

Query: 901  LEKLAIKMQAVGYVPDTTSVFHDVDQEEKETVLRVHSEKLAVVFGIMNSVPGTTIQVIKN 1080
            LEKL +++Q +GYVP+ TSV HDVD+EEKE +LRVHSEKLAV FG+MNS PGTTI +IKN
Sbjct: 1622 LEKLTLELQKIGYVPNMTSVLHDVDEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIKN 1681

Query: 1081 LRVCGDCHTAIKFLSMIANRVIVVRDSNRFHQFRDGLCSCGDYW 1212
            LRVCGDCHT IK +S + +R  VVRDS RFH F+DG+CSCGDYW
Sbjct: 1682 LRVCGDCHTVIKLISKLVHRDFVVRDSKRFHHFKDGVCSCGDYW 1725



 Score =  158 bits (400), Expect = 3e-36
 Identities = 82/189 (43%), Positives = 119/189 (62%)
 Frame = +1

Query: 1   SMIAIYAQNGLSMEALEVFYGMLMERKIKYNEVTLSAVLLACAHAGAWQLGQCIHDQVIK 180
           +MI  Y +N    EALE+F  M  E  I  NE T+ +++ AC   G   LG+ IHD  IK
Sbjct: 227 AMINGYIRNQQPEEALELFKRMQAEN-IFPNEYTMVSLIKACTEMGILTLGRGIHDYAIK 285

Query: 181 TGLEENVFIGTSVIDMYCKCGRVEMARKVFNCMKEKNVKSWTAMLSGYGMHGRAREALQV 360
             +E  V++GT++IDMY KCG ++ A +VF  M  K++ +W +M++  G+HG  +EAL +
Sbjct: 286 NCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNL 345

Query: 361 FYEMQREGVKPNYITFVGILAACSHAGLLEEGRHWFQTMNQDFGIEPGMEHYGCMVDLLG 540
           F EM+R  VKP+ ITF+G+L AC H   ++EG  +F  M Q +GI P  EHY CM +L  
Sbjct: 346 FSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYA 405

Query: 541 RAGYLNEAY 567
           R+  L+EA+
Sbjct: 406 RSNNLDEAF 414



 Score =  105 bits (263), Expect = 2e-20
 Identities = 70/226 (30%), Positives = 118/226 (52%), Gaps = 12/226 (5%)
 Frame = +1

Query: 1    SMIAIYAQNGLSMEALEVFYGMLMER-------KIKYNEVTLSAVLLACAHAGAWQLGQC 159
            SMI  Y QN  +  AL +F   L E         +  + V + +VL AC+      + + 
Sbjct: 1213 SMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEG 1272

Query: 160  IHDQVIKTGLEENVFIGTSVIDMYCKCGRVEMARKVFNCMKEKNVKSWTAMLSGYGMHGR 339
            +H  V+K G + ++ +G +++D Y KCG+  +++KVF+ M+EK+  SW +M++ Y   G 
Sbjct: 1273 VHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGL 1332

Query: 340  AREALQVFYEMQRE-GVKPNYITFVGILAACSHAGLLEEGRHWFQTMNQDFGIEPGMEHY 516
            + EAL+VF+ M R  GV+ N +T   +L AC+HAG L  G+        D  I+  +E+ 
Sbjct: 1333 SGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGK-----CIHDQVIKMDLEYN 1387

Query: 517  GC----MVDLLGRAGYLNEAYCLIKGMKTKPDFVVWGALLAACKIH 642
             C    ++D+  + G +  A      MK K +   W A++A   +H
Sbjct: 1388 VCVGTSIIDMYCKCGRVEMAKKTFDRMKEK-NVKSWTAMVAGYGMH 1432



 Score =  103 bits (258), Expect = 8e-20
 Identities = 70/239 (29%), Positives = 114/239 (47%), Gaps = 33/239 (13%)
 Frame = +1

Query: 25  NGLSMEALEVFYGMLMERKIKYNEVTLSAVLLACAHAGAWQLGQCIHDQVIKTGLEENVF 204
           NGLS +AL ++  M+ +  I  ++ T   V+ AC +  +  LG+ +H  +IK G   +VF
Sbjct: 103 NGLSEQALMLYKNMVCQG-IAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVF 161

Query: 205 IGTSVIDMYCKCGRVEMARKVFNCMK-------------------------------EKN 291
           +  ++ID Y KCG    A KVF  M+                                KN
Sbjct: 162 VQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKN 221

Query: 292 VKSWTAMLSGYGMHGRAREALQVFYEMQREGVKPNYITFVGILAACSHAGLLEEGR--HW 465
           V SWTAM++GY  + +  EAL++F  MQ E + PN  T V ++ AC+  G+L  GR  H 
Sbjct: 222 VVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHD 281

Query: 466 FQTMNQDFGIEPGMEHYGCMVDLLGRAGYLNEAYCLIKGMKTKPDFVVWGALLAACKIH 642
           +   N    IE G+     ++D+  + G + +A  + + M  K     W +++ +  +H
Sbjct: 282 YAIKN---CIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRK-SLPTWNSMITSLGVH 336



 Score = 79.0 bits (193), Expect = 3e-12
 Identities = 59/219 (26%), Positives = 106/219 (48%), Gaps = 10/219 (4%)
 Frame = +1

Query: 1    SMIAIYAQNGLSMEALEVFYGMLMERKIKYNEVTLSAVLLACAHAGAWQLGQCIHDQVIK 180
            S+IA  A+ G S+EAL  F   L +  +     +    + +C+       G+  H Q   
Sbjct: 1112 SVIADLARGGDSVEALRAF-SSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQAFV 1170

Query: 181  TGLEENVFIGTSVIDMYCKCGRVEMARKVFNCMKEKNVKSWTAMLSGYGMHGRAREALQV 360
             G E ++F+ +++IDMY KCG+++ AR +F+ +  +NV SWT+M++GY  + +A  AL +
Sbjct: 1171 FGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLL 1230

Query: 361  FYEMQRE--------GVKPNYITFVGILAACSHAG--LLEEGRHWFQTMNQDFGIEPGME 510
            F +   E         V  + +  V +L+ACS      + EG H F       G +  + 
Sbjct: 1231 FKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKK---GFDGSIG 1287

Query: 511  HYGCMVDLLGRAGYLNEAYCLIKGMKTKPDFVVWGALLA 627
                ++D   + G    +  +   M+ K D + W +++A
Sbjct: 1288 VGNTLMDAYAKCGQPLVSKKVFDWMEEKDD-ISWNSMIA 1325


>ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
          Length = 2598

 Score =  650 bits (1677), Expect = 0.0
 Identities = 303/404 (75%), Positives = 349/404 (86%)
 Frame = +1

Query: 1    SMIAIYAQNGLSMEALEVFYGMLMERKIKYNEVTLSAVLLACAHAGAWQLGQCIHDQVIK 180
            SMIA+YAQ+GLS EALEVF+GM+    ++YN VTLSAVLLACAHAGA + G+CIHDQVIK
Sbjct: 2195 SMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIK 2254

Query: 181  TGLEENVFIGTSVIDMYCKCGRVEMARKVFNCMKEKNVKSWTAMLSGYGMHGRAREALQV 360
              LE NV +GTS+IDMYCKCGRVEMA+K F+ MKEKNVKSWTAM++GYGMHGRA+EAL +
Sbjct: 2255 MDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDI 2314

Query: 361  FYEMQREGVKPNYITFVGILAACSHAGLLEEGRHWFQTMNQDFGIEPGMEHYGCMVDLLG 540
            FY+M R GVKPNYITFV +LAACSHAGL+EEG HWF  M   + IEPG+EHYGCMVDL G
Sbjct: 2315 FYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFG 2374

Query: 541  RAGYLNEAYCLIKGMKTKPDFVVWGALLAACKIHKNVELGEISARKLFELDPNNCGYYVL 720
            RAG LNEAY LIK MK KPDFVVWG+LL AC+IHKNV+LGEI+A+KLFELDP+NCGYYVL
Sbjct: 2375 RAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVL 2434

Query: 721  LSNIYADAGRWVDVERMRVFMKSHGLVKPPGFSLVEAKGRVHVFLVGDRHHPQHDEIYKY 900
            LSN+YADAGRW DVERMR+ MK+  LVKPPGFSLVE KGRVHVFLVGD+ HP H+ IYKY
Sbjct: 2435 LSNLYADAGRWADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKY 2494

Query: 901  LEKLAIKMQAVGYVPDTTSVFHDVDQEEKETVLRVHSEKLAVVFGIMNSVPGTTIQVIKN 1080
            LEKL +++Q +GYVP+ TSV HDVD+EEKE +LRVHSEKLAV FG+MNS PGTTI +IKN
Sbjct: 2495 LEKLTLELQKIGYVPNMTSVLHDVDEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIKN 2554

Query: 1081 LRVCGDCHTAIKFLSMIANRVIVVRDSNRFHQFRDGLCSCGDYW 1212
            LRVCGDCHT IK +S + +R  VVRDS RFH F+DG+CSCGDYW
Sbjct: 2555 LRVCGDCHTVIKLISKLVHRDFVVRDSKRFHHFKDGVCSCGDYW 2598



 Score =  158 bits (400), Expect = 3e-36
 Identities = 82/189 (43%), Positives = 119/189 (62%)
 Frame = +1

Query: 1   SMIAIYAQNGLSMEALEVFYGMLMERKIKYNEVTLSAVLLACAHAGAWQLGQCIHDQVIK 180
           +MI  Y +N    EALE+F  M  E  I  NE T+ +++ AC   G   LG+ IHD  IK
Sbjct: 227 AMINGYIRNQQPEEALELFKRMQAEN-IFPNEYTMVSLIKACTEMGILTLGRGIHDYAIK 285

Query: 181 TGLEENVFIGTSVIDMYCKCGRVEMARKVFNCMKEKNVKSWTAMLSGYGMHGRAREALQV 360
             +E  V++GT++IDMY KCG ++ A +VF  M  K++ +W +M++  G+HG  +EAL +
Sbjct: 286 NCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNL 345

Query: 361 FYEMQREGVKPNYITFVGILAACSHAGLLEEGRHWFQTMNQDFGIEPGMEHYGCMVDLLG 540
           F EM+R  VKP+ ITF+G+L AC H   ++EG  +F  M Q +GI P  EHY CM +L  
Sbjct: 346 FSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYA 405

Query: 541 RAGYLNEAY 567
           R+  L+EA+
Sbjct: 406 RSNNLDEAF 414



 Score =  105 bits (263), Expect = 2e-20
 Identities = 70/226 (30%), Positives = 118/226 (52%), Gaps = 12/226 (5%)
 Frame = +1

Query: 1    SMIAIYAQNGLSMEALEVFYGMLMER-------KIKYNEVTLSAVLLACAHAGAWQLGQC 159
            SMI  Y QN  +  AL +F   L E         +  + V + +VL AC+      + + 
Sbjct: 2086 SMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEG 2145

Query: 160  IHDQVIKTGLEENVFIGTSVIDMYCKCGRVEMARKVFNCMKEKNVKSWTAMLSGYGMHGR 339
            +H  V+K G + ++ +G +++D Y KCG+  +++KVF+ M+EK+  SW +M++ Y   G 
Sbjct: 2146 VHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGL 2205

Query: 340  AREALQVFYEMQRE-GVKPNYITFVGILAACSHAGLLEEGRHWFQTMNQDFGIEPGMEHY 516
            + EAL+VF+ M R  GV+ N +T   +L AC+HAG L  G+        D  I+  +E+ 
Sbjct: 2206 SGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGK-----CIHDQVIKMDLEYN 2260

Query: 517  GC----MVDLLGRAGYLNEAYCLIKGMKTKPDFVVWGALLAACKIH 642
             C    ++D+  + G +  A      MK K +   W A++A   +H
Sbjct: 2261 VCVGTSIIDMYCKCGRVEMAKKTFDRMKEK-NVKSWTAMVAGYGMH 2305



 Score =  103 bits (258), Expect = 8e-20
 Identities = 70/239 (29%), Positives = 114/239 (47%), Gaps = 33/239 (13%)
 Frame = +1

Query: 25  NGLSMEALEVFYGMLMERKIKYNEVTLSAVLLACAHAGAWQLGQCIHDQVIKTGLEENVF 204
           NGLS +AL ++  M+ +  I  ++ T   V+ AC +  +  LG+ +H  +IK G   +VF
Sbjct: 103 NGLSEQALMLYKNMVCQG-IAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVF 161

Query: 205 IGTSVIDMYCKCGRVEMARKVFNCMK-------------------------------EKN 291
           +  ++ID Y KCG    A KVF  M+                                KN
Sbjct: 162 VQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKN 221

Query: 292 VKSWTAMLSGYGMHGRAREALQVFYEMQREGVKPNYITFVGILAACSHAGLLEEGR--HW 465
           V SWTAM++GY  + +  EAL++F  MQ E + PN  T V ++ AC+  G+L  GR  H 
Sbjct: 222 VVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHD 281

Query: 466 FQTMNQDFGIEPGMEHYGCMVDLLGRAGYLNEAYCLIKGMKTKPDFVVWGALLAACKIH 642
           +   N    IE G+     ++D+  + G + +A  + + M  K     W +++ +  +H
Sbjct: 282 YAIKN---CIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRK-SLPTWNSMITSLGVH 336



 Score = 79.0 bits (193), Expect = 3e-12
 Identities = 59/219 (26%), Positives = 106/219 (48%), Gaps = 10/219 (4%)
 Frame = +1

Query: 1    SMIAIYAQNGLSMEALEVFYGMLMERKIKYNEVTLSAVLLACAHAGAWQLGQCIHDQVIK 180
            S+IA  A+ G S+EAL  F   L +  +     +    + +C+       G+  H Q   
Sbjct: 1985 SVIADLARGGDSVEALRAF-SSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQAFV 2043

Query: 181  TGLEENVFIGTSVIDMYCKCGRVEMARKVFNCMKEKNVKSWTAMLSGYGMHGRAREALQV 360
             G E ++F+ +++IDMY KCG+++ AR +F+ +  +NV SWT+M++GY  + +A  AL +
Sbjct: 2044 FGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLL 2103

Query: 361  FYEMQRE--------GVKPNYITFVGILAACSHAG--LLEEGRHWFQTMNQDFGIEPGME 510
            F +   E         V  + +  V +L+ACS      + EG H F       G +  + 
Sbjct: 2104 FKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKK---GFDGSIG 2160

Query: 511  HYGCMVDLLGRAGYLNEAYCLIKGMKTKPDFVVWGALLA 627
                ++D   + G    +  +   M+ K D + W +++A
Sbjct: 2161 VGNTLMDAYAKCGQPLVSKKVFDWMEEKDD-ISWNSMIA 2198


>ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical
            [Medicago truncatula] gi|355499496|gb|AES80699.1|
            Pentatricopeptide repeat-containing protein [Medicago
            truncatula]
          Length = 672

 Score =  638 bits (1645), Expect = e-180
 Identities = 292/404 (72%), Positives = 350/404 (86%)
 Frame = +1

Query: 1    SMIAIYAQNGLSMEALEVFYGMLMERKIKYNEVTLSAVLLACAHAGAWQLGQCIHDQVIK 180
            S+IA+YAQNGLS+EA  +F  M+   +++YN VTLSAVLLACAH+GA Q+G+CIHDQV+K
Sbjct: 269  SLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVK 328

Query: 181  TGLEENVFIGTSVIDMYCKCGRVEMARKVFNCMKEKNVKSWTAMLSGYGMHGRAREALQV 360
              LE+N+ +GTS++DMYCKCGRVEMARK F+ +K KNVKSWT M++GYGMHG  +EA++V
Sbjct: 329  MELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKV 388

Query: 361  FYEMQREGVKPNYITFVGILAACSHAGLLEEGRHWFQTMNQDFGIEPGMEHYGCMVDLLG 540
            FYEM R G+KPNYITFV +LAACSHAGLL+EG HWF  M  +F +EPG+EHY CMVDLLG
Sbjct: 389  FYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLG 448

Query: 541  RAGYLNEAYCLIKGMKTKPDFVVWGALLAACKIHKNVELGEISARKLFELDPNNCGYYVL 720
            RAGYL EAY LI+ MK KPDF+VWG+LL AC+IHKNVELGEISARKLF+LDP+NCGYYVL
Sbjct: 449  RAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVL 508

Query: 721  LSNIYADAGRWVDVERMRVFMKSHGLVKPPGFSLVEAKGRVHVFLVGDRHHPQHDEIYKY 900
            LSNIYADAGRW DVERMR+ MK+HGL+K PG+S+VE KGRVHVFLVGD+ HPQH++IY+Y
Sbjct: 509  LSNIYADAGRWDDVERMRILMKNHGLLKTPGYSIVEHKGRVHVFLVGDKEHPQHEKIYEY 568

Query: 901  LEKLAIKMQAVGYVPDTTSVFHDVDQEEKETVLRVHSEKLAVVFGIMNSVPGTTIQVIKN 1080
            L++L +K+Q VGY+P+ TSV +DVD EEK  VLRVHSEKLAV FGIMNSVPG+ IQ+IKN
Sbjct: 569  LDELNVKLQEVGYMPNVTSVLYDVDVEEKGMVLRVHSEKLAVAFGIMNSVPGSVIQIIKN 628

Query: 1081 LRVCGDCHTAIKFLSMIANRVIVVRDSNRFHQFRDGLCSCGDYW 1212
            LR+CGDCH AIK +S I NR IV+RDS RFH F+DGLCSCGDYW
Sbjct: 629  LRICGDCHFAIKLISKIVNREIVIRDSKRFHHFKDGLCSCGDYW 672



 Score =  104 bits (259), Expect = 6e-20
 Identities = 54/164 (32%), Positives = 94/164 (57%), Gaps = 11/164 (6%)
 Frame = +1

Query: 1   SMIAIYAQNGLSMEALEVFYGMLMERKIKYNEVT----------LSAVLLACAHAGAWQL 150
           SMI+ Y QN  + EA+ +F   L+  +  Y+E+           L  V+ ACA      +
Sbjct: 157 SMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSV 216

Query: 151 GQCIHDQVIKTGLEENVFIGTSVIDMYCKCGRVEMARKVFNCMKEKNVKSWTAMLSGYGM 330
            +C+H   +K G E  + +G +++D Y KCG + ++RKVF+ M+E +V SW ++++ Y  
Sbjct: 217 TECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQ 276

Query: 331 HGRAREALQVFYEMQREG-VKPNYITFVGILAACSHAGLLEEGR 459
           +G + EA  +F +M + G V+ N +T   +L AC+H+G L+ G+
Sbjct: 277 NGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGK 320



 Score = 87.0 bits (214), Expect = 1e-14
 Identities = 63/222 (28%), Positives = 112/222 (50%), Gaps = 13/222 (5%)
 Frame = +1

Query: 1   SMIAIYAQNGLSMEALEVFYGMLMERKIKY--NEVTLSAVLLACAHAGAWQLGQCIHDQV 174
           S+IA +A++G S++AL  F  M   RK+    N  T    + +C+       G+ IH Q 
Sbjct: 56  SIIADFARSGDSLQALYAFSSM---RKLSLHPNRSTFPCTIKSCSSLYDLCAGKQIHQQA 112

Query: 175 IKTGLEENVFIGTSVIDMYCKCGRVEMARKVFNCMKEKNVKSWTAMLSGYGMHGRAREAL 354
              G   ++F+ +++IDMY KCG +  ARK+F+ + E+NV SWT+M+SGY  + RAREA+
Sbjct: 113 FVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERAREAV 172

Query: 355 QVFY-----------EMQREGVKPNYITFVGILAACSHAGLLEEGRHWFQTMNQDFGIEP 501
            +F            E+   GV  + +    +++AC+    ++        +    G E 
Sbjct: 173 FLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARV-CVKSVTECVHGLAVKKGFEG 231

Query: 502 GMEHYGCMVDLLGRAGYLNEAYCLIKGMKTKPDFVVWGALLA 627
            +     ++D   + G ++ +  +  GM+ + D   W +L+A
Sbjct: 232 CLAVGNTLMDAYAKCGEISVSRKVFDGME-ETDVCSWNSLIA 272