BLASTX nr result

ID: Aconitum21_contig00012585 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00012585
         (820 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526650.1| PREDICTED: pentatricopeptide repeat-containi...    78   3e-12
ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containi...    76   8e-12
emb|CBI18974.3| unnamed protein product [Vitis vinifera]               76   8e-12
ref|XP_002520317.1| pentatricopeptide repeat-containing protein,...    72   2e-10
ref|XP_002307458.1| predicted protein [Populus trichocarpa] gi|2...    71   3e-10

>ref|XP_003526650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Glycine max]
          Length = 461

 Score = 77.8 bits (190), Expect = 3e-12
 Identities = 48/113 (42%), Positives = 63/113 (55%), Gaps = 9/113 (7%)
 Frame = +3

Query: 117 RNSSITELDVDAYTVT-KT*CKKDQLVMTLKVWKCMSLKSILPSMHTFSMFVNGFFERES 293
           R   + E D D YT+  K  C+K++L M LK+WK M  K  +PSMHTFS  + G  E+++
Sbjct: 346 RMIKLCEPDADTYTMMIKMFCEKNELEMALKIWKYMKSKQFVPSMHTFSALIKGLCEKDN 405

Query: 294 YKFLC----PFRRRRYPTVRLTFRRLQQFLI----NDVLEFHF*KMNLLVKEP 428
               C        +     R+TF RL+Q LI     DVL+F   KMNLLVKEP
Sbjct: 406 AAKACVVMEEMIEKGIRPSRITFGRLRQLLIKEGREDVLKFLHEKMNLLVKEP 458


>ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Vitis vinifera]
          Length = 476

 Score = 76.3 bits (186), Expect = 8e-12
 Identities = 48/113 (42%), Positives = 63/113 (55%), Gaps = 9/113 (7%)
 Frame = +3

Query: 117 RNSSITELDVDAYTVT-KT*CKKDQLVMTLKVWKCMSLKSILPSMHTFSMFVNGFFERES 293
           R   + + D D YT+  K  C+ D+L M LKVWK M LK  +PSMHTFS+ +NG  ++ +
Sbjct: 345 RMIKVCDPDADTYTMMIKMFCENDKLEMALKVWKYMRLKQFVPSMHTFSVLINGLCKKGN 404

Query: 294 YKFLC----PFRRRRYPTVRLTFRRLQQFLI----NDVLEFHF*KMNLLVKEP 428
               C        +      +TF +L+Q LI     DVLEF   KMNLLVKEP
Sbjct: 405 ASKACILLEEMIEKGIRPSSVTFGKLKQLLIKEGREDVLEFLQEKMNLLVKEP 457


>emb|CBI18974.3| unnamed protein product [Vitis vinifera]
          Length = 324

 Score = 76.3 bits (186), Expect = 8e-12
 Identities = 48/113 (42%), Positives = 63/113 (55%), Gaps = 9/113 (7%)
 Frame = +3

Query: 117 RNSSITELDVDAYTVT-KT*CKKDQLVMTLKVWKCMSLKSILPSMHTFSMFVNGFFERES 293
           R   + + D D YT+  K  C+ D+L M LKVWK M LK  +PSMHTFS+ +NG  ++ +
Sbjct: 193 RMIKVCDPDADTYTMMIKMFCENDKLEMALKVWKYMRLKQFVPSMHTFSVLINGLCKKGN 252

Query: 294 YKFLC----PFRRRRYPTVRLTFRRLQQFLI----NDVLEFHF*KMNLLVKEP 428
               C        +      +TF +L+Q LI     DVLEF   KMNLLVKEP
Sbjct: 253 ASKACILLEEMIEKGIRPSSVTFGKLKQLLIKEGREDVLEFLQEKMNLLVKEP 305


>ref|XP_002520317.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540536|gb|EEF42103.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 439

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 45/113 (39%), Positives = 60/113 (53%), Gaps = 9/113 (7%)
 Frame = +3

Query: 117 RNSSITELDVDAYTVT-KT*CKKDQLVMTLKVWKCMSLKSILPSMHTFSMFVNGFFERES 293
           R   + E D D YT+  K  C++++L M LKVWK M  K  +PSMHTFS+ +NG  E   
Sbjct: 324 RMIKVCEPDADTYTMMIKMFCERNELEMALKVWKYMKKKHFVPSMHTFSVLINGLCEEGD 383

Query: 294 YKFLC----PFRRRRYPTVRLTFRRLQQFLI----NDVLEFHF*KMNLLVKEP 428
               C        +      +TF RL+  LI     DVLEF   K+N+L+KEP
Sbjct: 384 VSHACVMLEDMIEKGIRPSGVTFGRLRHLLIKEGREDVLEFLQQKINVLIKEP 436


>ref|XP_002307458.1| predicted protein [Populus trichocarpa] gi|222856907|gb|EEE94454.1|
           predicted protein [Populus trichocarpa]
          Length = 440

 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 45/114 (39%), Positives = 62/114 (54%), Gaps = 9/114 (7%)
 Frame = +3

Query: 114 IRNSSITELDVDAYTVT-KT*CKKDQLVMTLKVWKCMSLKSILPSMHTFSMFVNGFFERE 290
           +R   + E D D YT+  K  C++D+L   LKVWK M LK  +PSMHTF + +NG  E+ 
Sbjct: 323 LRMIKVCEPDADTYTMMIKMFCERDELKKALKVWKYMKLKRFMPSMHTFQVLINGLCEKG 382

Query: 291 SYKFLCPFRRRRYPT-VR---LTFRRLQQFLI----NDVLEFHF*KMNLLVKEP 428
                C          +R   +TF RL+Q LI     DVL+F   K+N+LV +P
Sbjct: 383 DVTQACVLLEEMIEKGIRPSGVTFGRLRQLLIKEGREDVLKFLQKKINVLVNDP 436


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