BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00012529
         (456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGE44298.1| whirly transcription factor domain containing pro...    61   1e-07
sp|D9J034.1|WHY2_SOLTU RecName: Full=Single-stranded DNA-bindig ...    59   4e-07
pdb|3N1H|A Chain A, Crystal Structure Of Stwhy2 gi|302566180|pdb...    59   5e-07
pdb|3R9Y|A Chain A, Crystal Structure Of Stwhy2 K67a (Form I) gi...    56   3e-06
ref|NP_001045956.1| Os02g0158400 [Oryza sativa Japonica Group] g...    56   3e-06

>gb|AGE44298.1| whirly transcription factor domain containing protein [Musa AB
           Group]
          Length = 245

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 28/53 (52%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
 Frame = +3

Query: 303 FADYTIFKGKAAXXXXXXXXX-NKTEAG-SRYGKKGCILLTFWPAIGERKYDW 455
           + +YT+FKGKAA           + ++G SR  KKGC++LTFWPAIG+RKYDW
Sbjct: 62  YVEYTVFKGKAALSVSPILPTFREVDSGVSRVHKKGCVILTFWPAIGQRKYDW 114


>sp|D9J034.1|WHY2_SOLTU RecName: Full=Single-stranded DNA-bindig protein WHY2,
           mitochondrial; AltName: Full=Protein WHIRLY 2;
           Short=StWHY2; Flags: Precursor
           gi|298359665|gb|ADI77438.1| Why2 protein [Solanum
           tuberosum]
          Length = 238

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
 Frame = +3

Query: 258 RHIFTSQSENRPSKIFADYTIFKGKAAXXXXXXXXX-NKTEAGS-RYGKKGCILLTFWPA 431
           R    + +  R  ++FA Y++FKGKAA          N+ ++G  +  ++G I+LTFWP+
Sbjct: 43  RQNVVADAGKREGRVFAPYSVFKGKAALSAEPRLPTFNRLDSGGVKLNRRGVIMLTFWPS 102

Query: 432 IGERKYDW 455
           +GERKYDW
Sbjct: 103 VGERKYDW 110


>pdb|3N1H|A Chain A, Crystal Structure Of Stwhy2 gi|302566180|pdb|3N1I|A Chain
           A, Crystal Structure Of A Stwhy2-Ere32 Complex
           gi|302566182|pdb|3N1J|A Chain A, Crystal Structure Of A
           Stwhy2-Dt32 Complex gi|302566184|pdb|3N1K|A Chain A,
           Crystal Structure Of A Stwhy2-Cere32 Complex
           gi|302566186|pdb|3N1L|A Chain A, Crystal Structure Of A
           Stwhy2-Rcere32 Complex
          Length = 178

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 26/58 (44%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
 Frame = +3

Query: 288 RPSKIFADYTIFKGKAAXXXXXXXXX-NKTEAGS-RYGKKGCILLTFWPAIGERKYDW 455
           R  ++FA Y++FKGKAA          N+ ++G  +  ++G I+LTFWP++GERKYDW
Sbjct: 7   REGRVFAPYSVFKGKAALSAEPRLPTFNRLDSGGVKLNRRGVIMLTFWPSVGERKYDW 64


>pdb|3R9Y|A Chain A, Crystal Structure Of Stwhy2 K67a (Form I)
           gi|347948613|pdb|3R9Z|A Chain A, Crystal Structure Of
           Stwhy2 K67a (Form Ii) gi|347948614|pdb|3RA0|A Chain A,
           Crystal Structure Of A Stwhy2 K67a-Dt32 Complex
          Length = 178

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 25/58 (43%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
 Frame = +3

Query: 288 RPSKIFADYTIFKGKAAXXXXXXXXX-NKTEAGS-RYGKKGCILLTFWPAIGERKYDW 455
           R  ++FA Y++FKG AA          N+ ++G  +  ++G I+LTFWP++GERKYDW
Sbjct: 7   REGRVFAPYSVFKGAAALSAEPRLPTFNRLDSGGVKLNRRGVIMLTFWPSVGERKYDW 64


>ref|NP_001045956.1| Os02g0158400 [Oryza sativa Japonica Group]
           gi|50251252|dbj|BAD28032.1| putative Chain C, Structure
           Of The Plant Transcriptional Regulator Pbf-2 [Oryza
           sativa Japonica Group] gi|50252182|dbj|BAD28177.1|
           putative Chain C, Structure Of The Plant Transcriptional
           Regulator Pbf-2 [Oryza sativa Japonica Group]
           gi|113535487|dbj|BAF07870.1| Os02g0158400 [Oryza sativa
           Japonica Group] gi|215692593|dbj|BAG88013.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215704516|dbj|BAG94149.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215740785|dbj|BAG96941.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218190103|gb|EEC72530.1| hypothetical protein
           OsI_05924 [Oryza sativa Indica Group]
           gi|222622212|gb|EEE56344.1| hypothetical protein
           OsJ_05450 [Oryza sativa Japonica Group]
          Length = 228

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 29/60 (48%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
 Frame = +3

Query: 282 ENRPSKIFADYTIFKGKAAXXXXXXXXX-NKTEAG-SRYGKKGCILLTFWPAIGERKYDW 455
           EN   + FA YT+FKGKAA          +K E+G SR  K G ++LTF+PA+G+RKYD+
Sbjct: 40  ENTSGRKFASYTVFKGKAALSMQPILPSFSKLESGGSRVNKNGSVMLTFFPAVGQRKYDY 99