BLASTX nr result

ID: Aconitum21_contig00011281 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00011281
         (2125 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593623.1| Zinc finger CCCH domain-containing protein [...   168   5e-39
ref|XP_002329830.1| predicted protein [Populus trichocarpa] gi|2...   135   4e-29
ref|XP_004155642.1| PREDICTED: uncharacterized protein LOC101231...   125   3e-26
ref|XP_004134949.1| PREDICTED: zinc finger CCCH domain-containin...   125   3e-26
ref|XP_002305122.1| predicted protein [Populus trichocarpa] gi|2...   124   8e-26

>ref|XP_003593623.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
            gi|355482671|gb|AES63874.1| Zinc finger CCCH
            domain-containing protein [Medicago truncatula]
          Length = 892

 Score =  168 bits (426), Expect = 5e-39
 Identities = 159/553 (28%), Positives = 226/553 (40%), Gaps = 81/553 (14%)
 Frame = +2

Query: 281  KRVAVEGCIDVHKGNDEAQGGDQNILDFITPGAEKSKPSCINEKEVAAGTPSRDD--SSK 454
            +R A EGC +    N +A   D   +D     +  +KPS    K+V  G   RD+     
Sbjct: 353  QRKASEGCSEPDC-NSKASLSDVMDID-----SRATKPSSDTGKDVVTGIILRDNFVEDA 406

Query: 455  KSNVLFKEETKQMDMEIGDDIKLKASSSITPQIRPRSSSPGTEFEDGNKRPAIICDFFAR 634
              +   KE+  Q +ME   D+K K S       R R  SP  E +DGNKRPAIIC FFA+
Sbjct: 407  DGDQNSKEKVMQSEMESTVDVKQKPS-------RTRIHSPSAEIKDGNKRPAIICAFFAK 459

Query: 635  GWCIKGSSCKFLHQKDGVTSTSKSDKQD-APAGSTDNLAPEHRFLSSGALAQSSGYGNIN 811
            GWCI+GSSC FLH KD V +T +  + D   A     L  E     +   A  S + +  
Sbjct: 460  GWCIRGSSCSFLHVKDSVNNTDQGAEGDVVTAHQKRELKLEKGVKENEEEASPSWHPSHE 519

Query: 812  S---------IPYDKYGSRTSTGFFSSLNSDFNTSVPSQGIPALHQTYTWAG-------S 943
                       P +K    TS  +FSS  S +++   ++ + A+   + + G       S
Sbjct: 520  KEKFLMRDSLFPENKSAFNTSNNYFSSNLSSYSSR--AEEMIAIRNQHMYRGYTSTKDFS 577

Query: 944  ALSQRSSFDGDHGXXXXXXXXXXXXXXXXXXRHDPENFSLPI---NNWE-XXXXXXXXXX 1111
            +    S+ D  H                   R  P      +   +NWE           
Sbjct: 578  SPLGASALD-SHAHKSSFSSDREDFHLVGSSRVAPHANGYTLKTRSNWEPSVPFRPSFFI 636

Query: 1112 XXXXXXXXRNQYDPLLDSIDRPNGEDRTFQEFSVAQGVITHNISHQQAKRDSVFF-HQQT 1288
                    R+ YDPL +SI+ PN  D + +   + +G      S  +   DS     Q +
Sbjct: 637  TSMNVSSPRDLYDPLRNSIEIPNIGDGSLKASLLIRGSSVQASSQVRTYDDSAAVGKQMS 696

Query: 1289 QYGALRPSAEAATTFVTKEEN---------------PLKPGNNANTSNA----------- 1390
                 + S  +   F   E N                +  G  AN  N            
Sbjct: 697  DVNDDKSSVSSHHKFYENEPNRSSVPRGKDCLATKAEITSGTCANYQNGDIGVGQYAFGV 756

Query: 1391 ----------MEVDHRNLSHQADGSKPN---------------------KESKALKHFRA 1477
                       E D R+ S +++  K                       KE+K LK F A
Sbjct: 757  EDRIETLKKRTEHDARHHSDESEHKKNRVAKDNKFHEMEVDFQTDGSVLKETKTLKIFHA 816

Query: 1478 SLVEFVKELVKPHWRDGHLSKDAHNTVVKKAVEKVLSAFQPHQIPNTAESTTHYLSSCRP 1657
             LV+ VKEL+KP W +G LSKDAH  +VKK+V+KV+S  +P QIP T ++   Y+S CRP
Sbjct: 817  VLVDLVKELLKPFWHEGRLSKDAHILIVKKSVDKVISTLEPRQIPTTEDTAKQYVSLCRP 876

Query: 1658 KLTRLVEGYVGKY 1696
            K+ +LV GYV K+
Sbjct: 877  KIAKLVHGYVNKH 889


>ref|XP_002329830.1| predicted protein [Populus trichocarpa] gi|222870892|gb|EEF08023.1|
            predicted protein [Populus trichocarpa]
          Length = 669

 Score =  135 bits (340), Expect = 4e-29
 Identities = 65/110 (59%), Positives = 81/110 (73%)
 Frame = +2

Query: 1367 NNANTSNAMEVDHRNLSHQADGSKPNKESKALKHFRASLVEFVKELVKPHWRDGHLSKDA 1546
            ++   +N MEVD      Q  G    KESK L+HFR++L++FVK+L+KP WR+GHLSKDA
Sbjct: 563  DSVRQNNDMEVD------QKIGGDTQKESKVLRHFRSALIDFVKDLLKPTWREGHLSKDA 616

Query: 1547 HNTVVKKAVEKVLSAFQPHQIPNTAESTTHYLSSCRPKLTRLVEGYVGKY 1696
            HNT+VKK VEKVLS  QPHQIP T ES   YLSS +PK+ +LVEGY+ KY
Sbjct: 617  HNTIVKKTVEKVLSTLQPHQIPATVESIKQYLSSSQPKMAKLVEGYISKY 666



 Score = 87.0 bits (214), Expect = 2e-14
 Identities = 53/134 (39%), Positives = 76/134 (56%), Gaps = 6/134 (4%)
 Frame = +2

Query: 380 EKSKPSCINEKEVAAGTPSRDDSSKKSNVLF--KEETKQMDMEIGDDIKLKASSSITPQI 553
           E ++P  I   EV      R+   +++NV+   KEE K +D++  +D K +  S I+  +
Sbjct: 89  ETTEPFVITGIEVDVVLSKRNCLGQEANVVLDSKEELKPVDVK-SEDSKEQTESRISRLV 147

Query: 554 ----RPRSSSPGTEFEDGNKRPAIICDFFARGWCIKGSSCKFLHQKDGVTSTSKSDKQDA 721
               R RS SP TE  DGNKR A+ICDFFA+GWCI+GSSC+FLH      +T+K+D    
Sbjct: 148 ASGTRARSLSPSTELRDGNKRAAVICDFFAKGWCIRGSSCRFLH------TTNKADNTGQ 201

Query: 722 PAGSTDNLAPEHRF 763
             G  +    E +F
Sbjct: 202 QLGVDEVATREDQF 215


>ref|XP_004155642.1| PREDICTED: uncharacterized protein LOC101231580 [Cucumis sativus]
          Length = 738

 Score =  125 bits (315), Expect = 3e-26
 Identities = 58/93 (62%), Positives = 71/93 (76%)
 Frame = +2

Query: 1418 HQADGSKPNKESKALKHFRASLVEFVKELVKPHWRDGHLSKDAHNTVVKKAVEKVLSAFQ 1597
            H  +G+ P KESKA +HFR++L+E VKE++KP WR+GHL KD HNTVVKK  +KVL A Q
Sbjct: 644  HLMEGNAP-KESKATRHFRSALIELVKEILKPKWREGHLKKDVHNTVVKKTFDKVLGALQ 702

Query: 1598 PHQIPNTAESTTHYLSSCRPKLTRLVEGYVGKY 1696
             HQ+P T ES   YLSS RPK+ +LVEGYV KY
Sbjct: 703  SHQVPTTVESVKQYLSSSRPKIEKLVEGYVSKY 735



 Score = 72.4 bits (176), Expect = 5e-10
 Identities = 60/219 (27%), Positives = 95/219 (43%), Gaps = 23/219 (10%)
 Frame = +2

Query: 140 NTKVGDVSHVGDGDTKPQV-----LGKEVVASEDK--GIQDSFSDSKVI-DSQPQKRVAV 295
           N++V  +S VG+ +    +      GK +   E++  G    F   K + D   + +   
Sbjct: 20  NSEVNKLSFVGETENSGNIEFSSPSGKPLEKKEEQSHGESTKFESQKCLKDKGTEDQEPT 79

Query: 296 EGCIDVHKGNDEAQGGDQNILDFITPGAEKSKPSCINEKEVAAGTPSRDDSSKKSNVLFK 475
            G  DV    ++  GG           +    P C +E  VA  T    D+ + S++  K
Sbjct: 80  VGDKDVEALRNKDFGGS----------SYNKVPLCNSEVMVATATNGSSDTLEDSDIGSK 129

Query: 476 E--------------ETKQMDMEIGDDIKLKASSSITPQIRPRSSSPGTEFEDGNKRPAI 613
                          E++QM M++ +     AS S   + R RS +P  +     K PA 
Sbjct: 130 NHSAGRIIGTKNPERESEQMGMQLDNGENQMASRSTASKKRSRSLTPVADVNGEEKHPAA 189

Query: 614 -ICDFFARGWCIKGSSCKFLHQKDGVTSTSKSDKQDAPA 727
            ICDF+A+GWCIKGSSC FLH K+    + +  ++ A A
Sbjct: 190 AICDFYAKGWCIKGSSCSFLHIKNNAYGSDQHSEERAGA 228


>ref|XP_004134949.1| PREDICTED: zinc finger CCCH domain-containing protein 27-like
            [Cucumis sativus]
          Length = 458

 Score =  125 bits (315), Expect = 3e-26
 Identities = 58/93 (62%), Positives = 71/93 (76%)
 Frame = +2

Query: 1418 HQADGSKPNKESKALKHFRASLVEFVKELVKPHWRDGHLSKDAHNTVVKKAVEKVLSAFQ 1597
            H  +G+ P KESKA +HFR++L+E VKE++KP WR+GHL KD HNTVVKK  +KVL A Q
Sbjct: 364  HLMEGNAP-KESKATRHFRSALIELVKEILKPKWREGHLKKDVHNTVVKKTFDKVLGALQ 422

Query: 1598 PHQIPNTAESTTHYLSSCRPKLTRLVEGYVGKY 1696
             HQ+P T ES   YLSS RPK+ +LVEGYV KY
Sbjct: 423  SHQVPTTVESVKQYLSSSRPKIEKLVEGYVSKY 455


>ref|XP_002305122.1| predicted protein [Populus trichocarpa] gi|222848086|gb|EEE85633.1|
            predicted protein [Populus trichocarpa]
          Length = 120

 Score =  124 bits (312), Expect = 8e-26
 Identities = 56/84 (66%), Positives = 70/84 (83%)
 Frame = +2

Query: 1445 KESKALKHFRASLVEFVKELVKPHWRDGHLSKDAHNTVVKKAVEKVLSAFQPHQIPNTAE 1624
            +ESK L+HFR+ L++FVKEL+KP WR+GHLS+DAHNT+VKK  EKVLS+ QPHQIP   E
Sbjct: 34   EESKVLRHFRSVLIDFVKELLKPTWREGHLSEDAHNTIVKKTAEKVLSSLQPHQIPAAVE 93

Query: 1625 STTHYLSSCRPKLTRLVEGYVGKY 1696
            S   +LSS +PK+T+LVEGYV KY
Sbjct: 94   SIKQFLSSSQPKMTKLVEGYVSKY 117


Top