BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00011233
         (611 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containi...   194   1e-47
ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containi...   182   3e-44
ref|XP_002511313.1| pentatricopeptide repeat-containing protein,...   181   1e-43
ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containi...   177   1e-42
ref|XP_003549820.1| PREDICTED: pentatricopeptide repeat-containi...   166   2e-39

>ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Vitis vinifera]
          Length = 631

 Score =  194 bits (493), Expect = 1e-47
 Identities = 95/202 (47%), Positives = 141/202 (69%)
 Frame = -2

Query: 610 FHFFNWVYSKNGVKPSSMVYSLMLRILGTKNSLNEFWGLVKQMSQDGFDVDDKAYRVVLR 431
           ++FFNWV  KNG +PSS +YSL+LR L    S+ +FW  +++M + GF +D + Y  +L 
Sbjct: 112 WNFFNWVTEKNGFRPSSAMYSLILRSLVHGESMKQFWVTIRKMKEQGFCIDKETYLTILG 171

Query: 430 NFKSSKMMSDAKTLTQFYNKMKEGSSINGTVKCVVDVVLESELNNDLKKKLGELNVSLCE 251
            FK  KM S+   LT FYN+M + ++++  VK VV++V  S  +++++KKLGEL  S  +
Sbjct: 172 VFKKGKMASEEVALTHFYNRMVQENAMDEVVKKVVELVTMSVWSSEVEKKLGELKNSFSD 231

Query: 250 SIMLRVFWGLYGDPLKAFWFFRWLREDMGYTHNAITYNGILRVLCQEESINEFWNMVDEM 71
           + +L V   L G PLKA  FF+W+ E  GY H++ITYN I RVL +++SI EFW+MV+EM
Sbjct: 232 NFVLHVLRELRGYPLKALRFFQWVGECPGYEHSSITYNVIARVLGRDDSIGEFWSMVEEM 291

Query: 70  KSVGHDIEIDTYIKILRAFERS 5
           KS GH+++IDTYIKI R F+++
Sbjct: 292 KSKGHEMDIDTYIKISRQFQKN 313



 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 51/200 (25%), Positives = 97/200 (48%), Gaps = 5/200 (2%)
 Frame = -2

Query: 604 FFNWVYSKNGVKPSSMVYSLMLRILGTKNSLNEFWGLVKQMSQDGFDVDDKAYRVVLRNF 425
           FF WV    G + SS+ Y+++ R+LG  +S+ EFW +V++M   G ++D   Y  + R F
Sbjct: 251 FFQWVGECPGYEHSSITYNVIARVLGRDDSIGEFWSMVEEMKSKGHEMDIDTYIKISRQF 310

Query: 424 KSSKMMSDAKTLTQFYNKMKEGSSINGTVKCVVDVVLESELNNDLKKKLGELNVSLCESI 245
           + +KM+ DA  L +         S+      +  + L S  +  L  ++ E   ++  S+
Sbjct: 311 QKNKMLEDAVKLYEIMMDGPYKPSVQDCTMLLRSISLSSNPDLALVFRVTEKYEAVGNSL 370

Query: 244 MLRVFWGLYGDPLKAFWFFR--WLREDM---GYTHNAITYNGILRVLCQEESINEFWNMV 80
              V+ G++        F     + E M   G   + ITY+ ++  LC+   + E   ++
Sbjct: 371 CKAVYDGIHRSLTSVGRFDEAGKIMESMRSAGCEPDNITYSQLVYGLCKARKLEEACKLL 430

Query: 79  DEMKSVGHDIEIDTYIKILR 20
           DEM++ G   +I T+  +++
Sbjct: 431 DEMEACGCVPDIKTWTILIQ 450



 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 34/108 (31%), Positives = 64/108 (59%)
 Frame = -2

Query: 331 VVDVVLESELNNDLKKKLGELNVSLCESIMLRVFWGLYGDPLKAFWFFRWLREDMGYTHN 152
           +V++VLE++ +++L+ +L + +  L    ++ V   L  DP + + FF W+ E  G+  +
Sbjct: 68  IVELVLENDWSDELESELEKSSSVLTHETVIYVLKKLDKDPQRTWNFFNWVTEKNGFRPS 127

Query: 151 AITYNGILRVLCQEESINEFWNMVDEMKSVGHDIEIDTYIKILRAFER 8
           +  Y+ ILR L   ES+ +FW  + +MK  G  I+ +TY+ IL  F++
Sbjct: 128 SAMYSLILRSLVHGESMKQFWVTIRKMKEQGFCIDKETYLTILGVFKK 175


>ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Glycine max]
          Length = 635

 Score =  182 bits (463), Expect = 3e-44
 Identities = 84/200 (42%), Positives = 132/200 (66%)
 Frame = -2

Query: 604 FFNWVYSKNGVKPSSMVYSLMLRILGTKNSLNEFWGLVKQMSQDGFDVDDKAYRVVLRNF 425
           FFNWV  K   +PS  VYSL++RIL  K+++ +FW  ++ M ++GF +D++ Y  +   F
Sbjct: 113 FFNWVCKKVWFRPSCSVYSLIVRILAAKDTMKQFWVTLRMMKENGFFLDEETYLTISVGF 172

Query: 424 KSSKMMSDAKTLTQFYNKMKEGSSINGTVKCVVDVVLESELNNDLKKKLGELNVSLCESI 245
           K  KM SD+  LT FYN+M E +++   V  VV ++  SE  +++  +L +L + L ++ 
Sbjct: 173 KREKMDSDSVALTHFYNRMLEENAMQSVVSNVVGIISRSEWGDEVVGELAKLEIQLSDNF 232

Query: 244 MLRVFWGLYGDPLKAFWFFRWLREDMGYTHNAITYNGILRVLCQEESINEFWNMVDEMKS 65
           ++RV   L   PLKA+ FF W+ +  GY H+ +TYN + RVL + ESI EFW++++EMK 
Sbjct: 233 VIRVLKELRKTPLKAYKFFHWVGKQSGYEHDTVTYNAVARVLPRAESIEEFWSVIEEMKR 292

Query: 64  VGHDIEIDTYIKILRAFERS 5
           VGH+++IDTYIKI R  +R+
Sbjct: 293 VGHELDIDTYIKITRQLQRN 312



 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 47/196 (23%), Positives = 93/196 (47%)
 Frame = -2

Query: 610 FHFFNWVYSKNGVKPSSMVYSLMLRILGTKNSLNEFWGLVKQMSQDGFDVDDKAYRVVLR 431
           + FF+WV  ++G +  ++ Y+ + R+L    S+ EFW ++++M + G ++D   Y  + R
Sbjct: 248 YKFFHWVGKQSGYEHDTVTYNAVARVLPRAESIEEFWSVIEEMKRVGHELDIDTYIKITR 307

Query: 430 NFKSSKMMSDAKTLTQFYNKMKEGSSINGTVKCVVDVVLESELNNDLKKKLGELNVSLCE 251
             + ++MM DA    + Y  M +GS       C  +++L+S   ND      + N+ L  
Sbjct: 308 QLQRNRMMEDA---VKLYELMMDGSCKPLVQDC--NMLLKSISAND------KPNLDLVF 356

Query: 250 SIMLRVFWGLYGDPLKAFWFFRWLREDMGYTHNAITYNGILRVLCQEESINEFWNMVDEM 71
            +  +                    E  G+T +   Y+GI R L    + +E  N+V  M
Sbjct: 357 RVAKKY-------------------ESTGHTLSKAIYDGIHRSLTSAGNFDEAENIVRTM 397

Query: 70  KSVGHDIEIDTYIKIL 23
           ++ G++ +  TY +++
Sbjct: 398 RNAGYEPDNITYSQMV 413


>ref|XP_002511313.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550428|gb|EEF51915.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 627

 Score =  181 bits (458), Expect = 1e-43
 Identities = 88/200 (44%), Positives = 134/200 (67%)
 Frame = -2

Query: 604 FFNWVYSKNGVKPSSMVYSLMLRILGTKNSLNEFWGLVKQMSQDGFDVDDKAYRVVLRNF 425
           FFNWV  +NG KPSS +YSLMLRIL  K+S+  FW  +++M + GF  D++ Y  +L  F
Sbjct: 112 FFNWVCDRNGFKPSSPLYSLMLRILVKKDSMKNFWITLRKMKEQGFYTDEETYLTILGVF 171

Query: 424 KSSKMMSDAKTLTQFYNKMKEGSSINGTVKCVVDVVLESELNNDLKKKLGELNVSLCESI 245
           +  +M SDA     F+++M E ++++  VK VV VV  +E +N+++K+L  + + L ++ 
Sbjct: 172 RKERMDSDAVAFKHFFDRMVEENAMDSVVKNVVSVVSATEWSNEVEKELEGMGILLTDNF 231

Query: 244 MLRVFWGLYGDPLKAFWFFRWLREDMGYTHNAITYNGILRVLCQEESINEFWNMVDEMKS 65
           ++RV   L   PLKA  FF W  +   Y  N ITYN I RVL +++SI EFW++V+EMK+
Sbjct: 232 VIRVLKELRNYPLKALQFFNWAGKCERYECNTITYNAIARVLGRDDSIGEFWSVVEEMKN 291

Query: 64  VGHDIEIDTYIKILRAFERS 5
            GH+++IDTYIKI R F+++
Sbjct: 292 AGHEMDIDTYIKISRQFQKN 311



 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 46/201 (22%), Positives = 98/201 (48%), Gaps = 6/201 (2%)
 Frame = -2

Query: 604 FFNWVYSKNGVKPSSMVYSLMLRILGTKNSLNEFWGLVKQMSQDGFDVDDKAYRVVLRNF 425
           FFNW       + +++ Y+ + R+LG  +S+ EFW +V++M   G ++D   Y  + R F
Sbjct: 249 FFNWAGKCERYECNTITYNAIARVLGRDDSIGEFWSVVEEMKNAGHEMDIDTYIKISRQF 308

Query: 424 KSSKMMSDAKTLTQFYNKMKEGSSINGTVKCVVDVVLESELNNDLKKKLGELNVSLCESI 245
           + +K+M DA  L +F        S+      +  +   +  + +L  ++     +   S+
Sbjct: 309 QKNKLMGDAVKLYEFMMDGPFKPSVQDCSMLLRSISASNYPDLNLVFRVVNKYEATGNSL 368

Query: 244 MLRVFWGLY------GDPLKAFWFFRWLREDMGYTHNAITYNGILRVLCQEESINEFWNM 83
              V+ G++      G+  +A    + + +  GY  + ITY+ ++  LC+   + E   +
Sbjct: 369 SKAVYDGIHRSLTSIGNFDEAAKMMKCM-QTAGYEPDNITYSQLVFGLCKARRLEEACEV 427

Query: 82  VDEMKSVGHDIEIDTYIKILR 20
           +DEM++ G   +I T+  +++
Sbjct: 428 LDEMEAHGCLPDIKTWTILIQ 448


>ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cucumis sativus]
           gi|449524136|ref|XP_004169079.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cucumis sativus]
          Length = 632

 Score =  177 bits (450), Expect = 1e-42
 Identities = 85/200 (42%), Positives = 129/200 (64%)
 Frame = -2

Query: 604 FFNWVYSKNGVKPSSMVYSLMLRILGTKNSLNEFWGLVKQMSQDGFDVDDKAYRVVLRNF 425
           FFNW   KNG   SS +YS++LRI     S+  FW  ++ M + GF +D++ Y+ +L   
Sbjct: 107 FFNWASGKNGSTQSSSIYSMLLRIFVQNESMKLFWITLRLMKERGFYLDEETYKTILGVL 166

Query: 424 KSSKMMSDAKTLTQFYNKMKEGSSINGTVKCVVDVVLESELNNDLKKKLGELNVSLCESI 245
           + SK  +DA  LT FYN+M + ++++  V+ VVD+VL S+ +ND+  KL EL ++L ++ 
Sbjct: 167 RKSKKAADATGLTHFYNRMLQQNAMDSVVQKVVDIVLGSDWSNDVPGKLEELGIALSDNF 226

Query: 244 MLRVFWGLYGDPLKAFWFFRWLREDMGYTHNAITYNGILRVLCQEESINEFWNMVDEMKS 65
           ++RV   L   PLKA  FF W+     Y HN ++YN I RVL +++SI  FW +++EMK 
Sbjct: 227 VIRVLKELRNSPLKALSFFHWVGCRPDYDHNTVSYNAIARVLGRDDSIEAFWGVIEEMKH 286

Query: 64  VGHDIEIDTYIKILRAFERS 5
             H+I+IDTYIKI R F++S
Sbjct: 287 ANHEIDIDTYIKISRQFQKS 306



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 50/207 (24%), Positives = 96/207 (46%), Gaps = 12/207 (5%)
 Frame = -2

Query: 604 FFNWVYSKNGVKPSSMVYSLMLRILGTKNSLNEFWGLVKQMSQDGFDVDDKAYRVVLRNF 425
           FF+WV  +     +++ Y+ + R+LG  +S+  FWG++++M     ++D   Y  + R F
Sbjct: 244 FFHWVGCRPDYDHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDIDTYIKISRQF 303

Query: 424 KSSKMMSDAKTLTQFYNKMKEGSSINGTVKCVVDV-VLESELNNDLK------KKLGELN 266
           + SKMM +A    + Y  M +G        C V +  + +  N DL       KK     
Sbjct: 304 QKSKMMGEA---VKLYELMMDGPYKPSLQDCSVLLRTIAASDNPDLSLVYRVAKKFEATG 360

Query: 265 VSLCESIMLRVF-----WGLYGDPLKAFWFFRWLREDMGYTHNAITYNGILRVLCQEESI 101
            SL +++   +       G + D        R    + GY  + +TY+ ++  LC+   +
Sbjct: 361 YSLSKAMYDGIHRSLTSTGKFDDAENIVKSMR----NAGYEPDNVTYSQLVFGLCKARRL 416

Query: 100 NEFWNMVDEMKSVGHDIEIDTYIKILR 20
            E   ++DEM++ G   +I T+  +++
Sbjct: 417 EEARKVLDEMEAQGCIPDIKTWTILIQ 443


>ref|XP_003549820.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Glycine max]
          Length = 635

 Score =  166 bits (421), Expect = 2e-39
 Identities = 77/200 (38%), Positives = 127/200 (63%)
 Frame = -2

Query: 604 FFNWVYSKNGVKPSSMVYSLMLRILGTKNSLNEFWGLVKQMSQDGFDVDDKAYRVVLRNF 425
           FFNWV +K   +PSS +Y L+LR+L T+ ++  FW  ++ M   GF  D++ Y  +L  F
Sbjct: 117 FFNWVSAKEWYRPSSSLYGLILRVLATEETIKLFWITLRTMKTKGFYFDEEMYFPILAGF 176

Query: 424 KSSKMMSDAKTLTQFYNKMKEGSSINGTVKCVVDVVLESELNNDLKKKLGELNVSLCESI 245
           K   M  D  +LT+FY++  + +++   V  VVD++  SE  +++   L +L + + ++ 
Sbjct: 177 KRKNMNKDRVSLTRFYSQGIQENAMQIVVTKVVDIISGSEWGDEVMSNLAKLEIRMSDNF 236

Query: 244 MLRVFWGLYGDPLKAFWFFRWLREDMGYTHNAITYNGILRVLCQEESINEFWNMVDEMKS 65
           + RV   L   PLKA+ FF W+ +  GY H+ +TYN I RVL   +SI +FW++++EMKS
Sbjct: 237 VTRVLKELRNCPLKAYEFFNWVGKQSGYEHDTVTYNAIARVLASTDSIEKFWSVIEEMKS 296

Query: 64  VGHDIEIDTYIKILRAFERS 5
           VGH+++IDTYIKI +  +++
Sbjct: 297 VGHELDIDTYIKISKKLQKN 316



 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 46/203 (22%), Positives = 99/203 (48%), Gaps = 6/203 (2%)
 Frame = -2

Query: 610 FHFFNWVYSKNGVKPSSMVYSLMLRILGTKNSLNEFWGLVKQMSQDGFDVDDKAYRVVLR 431
           + FFNWV  ++G +  ++ Y+ + R+L + +S+ +FW ++++M   G ++D   Y  + +
Sbjct: 252 YEFFNWVGKQSGYEHDTVTYNAIARVLASTDSIEKFWSVIEEMKSVGHELDIDTYIKISK 311

Query: 430 NFKSSKMMSDAKTLTQFYNKMKEGSSINGTVKCVVDVVLESELNNDLKKKLGELNVSLCE 251
             + +KMM DA  L +         S+      +  +    + N DL  ++ +   S   
Sbjct: 312 KLQKNKMMEDAVKLYELTMDGSYKPSVKDCSLLLKSISASDDPNLDLVFRVSKKYESTWH 371

Query: 250 SIMLRVFWGLY------GDPLKAFWFFRWLREDMGYTHNAITYNGILRVLCQEESINEFW 89
           ++   ++ G++      G   +A      +R + GY  + ITYN  +   C+   ++E  
Sbjct: 372 TLSKAIYDGIHRSLSGAGKLDEAESIVNHMR-NAGYEPDNITYNQTIFGFCKMRKLDEAC 430

Query: 88  NMVDEMKSVGHDIEIDTYIKILR 20
            +++EM+S G   EI T+  +++
Sbjct: 431 KVLEEMESCGFIPEIKTWTILIQ 453



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 34/108 (31%), Positives = 58/108 (53%)
 Frame = -2

Query: 331 VVDVVLESELNNDLKKKLGELNVSLCESIMLRVFWGLYGDPLKAFWFFRWLREDMGYTHN 152
           +V++VL S+ +  L+++L +   S+    ++ V   +  +P KA+ FF W+     Y  +
Sbjct: 71  IVELVLTSDWSKGLEQELEKCYPSMTHETVVYVLKRMEANPEKAWCFFNWVSAKEWYRPS 130

Query: 151 AITYNGILRVLCQEESINEFWNMVDEMKSVGHDIEIDTYIKILRAFER 8
           +  Y  ILRVL  EE+I  FW  +  MK+ G   + + Y  IL  F+R
Sbjct: 131 SSLYGLILRVLATEETIKLFWITLRTMKTKGFYFDEEMYFPILAGFKR 178