BLASTX nr result

ID: Aconitum21_contig00010894 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00010894
         (482 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548315.1| PREDICTED: probable cyclic nucleotide-gated ...    80   2e-13
ref|XP_003529780.1| PREDICTED: probable cyclic nucleotide-gated ...    78   8e-13
ref|XP_003534111.1| PREDICTED: probable cyclic nucleotide-gated ...    76   2e-12
ref|XP_002524633.1| Cyclic nucleotide-gated ion channel, putativ...    71   1e-10
ref|XP_002334224.1| cyclic nucleotide-gated channel [Populus tri...    68   9e-10

>ref|XP_003548315.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
           chloroplastic-like [Glycine max]
          Length = 772

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 45/80 (56%), Positives = 54/80 (67%), Gaps = 9/80 (11%)
 Frame = +1

Query: 241 MSGYEKDEIPMLSST--RLSDENTDVEPQRIRSRTRSASMSIPMHSIDSYESETRYVSHT 414
           M+ +EKDE+PMLS T  RLSDE  D   +R+ SRTRSAS+SIPM S++SYE ET  V HT
Sbjct: 1   MAHFEKDEVPMLSETHARLSDEVVDSNFRRLVSRTRSASISIPMASLESYEKETNLVGHT 60

Query: 415 G-------LPLTQMSDPLYS 453
           G        P  QMS PLY+
Sbjct: 61  GPLRSVRKTPFVQMSGPLYA 80


>ref|XP_003529780.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
           chloroplastic-like [Glycine max]
          Length = 217

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 44/80 (55%), Positives = 54/80 (67%), Gaps = 9/80 (11%)
 Frame = +1

Query: 241 MSGYEKDEIPMLSST--RLSDENTDVEPQRIRSRTRSASMSIPMHSIDSYESETRYVSHT 414
           M+ +EKDE+PMLS T  +LSDE  D   +R+ SRTRSAS+SIPM S++SYE ET  V HT
Sbjct: 1   MAHFEKDEVPMLSETHAQLSDEVVDSSFRRLVSRTRSASISIPMASLESYEKETSLVGHT 60

Query: 415 G-------LPLTQMSDPLYS 453
           G        P  QMS PLY+
Sbjct: 61  GPLCSVRKTPFVQMSGPLYA 80


>ref|XP_003534111.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
           chloroplastic-like [Glycine max]
          Length = 770

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 43/80 (53%), Positives = 54/80 (67%), Gaps = 9/80 (11%)
 Frame = +1

Query: 241 MSGYEKDEIPMLSST--RLSDENTDVEPQRIRSRTRSASMSIPMHSIDSYESETRYVSHT 414
           M+ +EKDE+PMLS T  +LSDE  D   +R+ SRT+SAS+SIPM S++SYE ET  V HT
Sbjct: 1   MAHFEKDEVPMLSETHAQLSDEVVDSNFRRLVSRTQSASISIPMASLESYEKETSLVGHT 60

Query: 415 G-------LPLTQMSDPLYS 453
           G        P  QMS PLY+
Sbjct: 61  GPLRSVRKTPFVQMSGPLYA 80


>ref|XP_002524633.1| Cyclic nucleotide-gated ion channel, putative [Ricinus communis]
           gi|223536102|gb|EEF37758.1| Cyclic nucleotide-gated ion
           channel, putative [Ricinus communis]
          Length = 778

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 39/83 (46%), Positives = 54/83 (65%), Gaps = 9/83 (10%)
 Frame = +1

Query: 241 MSGYEKDEIPMLSST--RLSDENTDVEPQRIRSRTRSASMSIPMHSIDSYESETRYVSHT 414
           M+ Y+KDE+PMLS    +L DEN D   Q   SRT+SAS+SIPM++++SY +E   V +T
Sbjct: 1   MASYDKDEVPMLSDVHPQLLDENPDSRFQAFVSRTQSASISIPMNTMESYGNEANLVGYT 60

Query: 415 G-------LPLTQMSDPLYSNQK 462
           G         + QMS P+YSN+K
Sbjct: 61  GPLRSERRAQMNQMSGPIYSNRK 83


>ref|XP_002334224.1| cyclic nucleotide-gated channel [Populus trichocarpa]
           gi|222869985|gb|EEF07116.1| cyclic nucleotide-gated
           channel [Populus trichocarpa]
          Length = 190

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 40/82 (48%), Positives = 51/82 (62%), Gaps = 9/82 (10%)
 Frame = +1

Query: 241 MSGYEKDEIPMLSST--RLSDENTDVEPQRIRSRTRSASMSIPMHSIDSYESETRYVSHT 414
           M+ ++KD+IPMLS T  +  DEN D   +   SRT+SAS SIP+ S++SY SET  V  T
Sbjct: 1   MANHDKDDIPMLSDTHPKSVDENVDSRFRPFLSRTQSASTSIPLDSMESYGSETNLVGFT 60

Query: 415 G-------LPLTQMSDPLYSNQ 459
           G        PL QMS PLY N+
Sbjct: 61  GPLRSARKAPLVQMSGPLYINR 82


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