BLASTX nr result

ID: Aconitum21_contig00010723 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00010723
         (612 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277489.1| PREDICTED: putative SWI/SNF-related matrix-a...   281   5e-74
ref|XP_002308876.1| chromatin remodeling complex subunit [Populu...   264   8e-69
ref|XP_002517285.1| helicase, putative [Ricinus communis] gi|223...   261   7e-68
ref|NP_196132.2| DNA/RNA helicase [Arabidopsis thaliana] gi|2026...   252   3e-65
sp|Q9FF61.1|SM3L1_ARATH RecName: Full=Putative SWI/SNF-related m...   252   3e-65

>ref|XP_002277489.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A member 3-like 1-like
            [Vitis vinifera]
          Length = 874

 Score =  281 bits (720), Expect = 5e-74
 Identities = 140/204 (68%), Positives = 159/204 (77%), Gaps = 1/204 (0%)
 Frame = +2

Query: 2    SLLPSSNIEDVSNNPEXXXXXXXXXQDGDDFDCPICISPPTNTVITRCAHVFCRSCILKA 181
            SLL S+NIEDVSNNPE         QDG+DFDCPICISPPTN VIT CAH+FCR CILK 
Sbjct: 598  SLLLSNNIEDVSNNPELLKKMVLVLQDGEDFDCPICISPPTNIVITCCAHIFCRVCILKT 657

Query: 182  LKRPNPSCPLCRQTLSESDLFSAPPEPSDSDDNTVPSKE-TSSXXXXXXXXXXXDREQDP 358
            LKR  P CPLCR  LS+SDLFSAPPE +++D++ +PS E TSS            R+Q+P
Sbjct: 658  LKRTKPCCPLCRHPLSQSDLFSAPPESTETDNSEIPSSECTSSKVLTLLKFLSASRDQNP 717

Query: 359  STKSVIFSQFRKMLILLEQPLKASGFSILRLDGSMTAKKRAEVIDEFGNRDSGSPTVLLA 538
            STKSV+FSQFRKML+LLEQPLKA+GF  LRLDGSM AK+RA+VI+EFG      PTVLLA
Sbjct: 718  STKSVVFSQFRKMLLLLEQPLKAAGFKTLRLDGSMNAKRRAQVIEEFGAPGPNGPTVLLA 777

Query: 539  SIKASGAGINLTVASRVYLLEPWW 610
            S+KASGAGINLT ASRVYLLEPWW
Sbjct: 778  SLKASGAGINLTAASRVYLLEPWW 801


>ref|XP_002308876.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222854852|gb|EEE92399.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 799

 Score =  264 bits (675), Expect = 8e-69
 Identities = 134/204 (65%), Positives = 152/204 (74%), Gaps = 1/204 (0%)
 Frame = +2

Query: 2    SLLPSSNIEDVSNNPEXXXXXXXXXQDGDDFDCPICISPPTNTVITRCAHVFCRSCILKA 181
            SLLPS++IEDVSNNPE         QDG+DFDCPICI PPT TVITRCAH+FCR CILK 
Sbjct: 523  SLLPSNSIEDVSNNPELLMKMVTVLQDGEDFDCPICICPPTETVITRCAHIFCRPCILKT 582

Query: 182  LKRPNPSCPLCRQTLSESDLFSAPPEPSDSDD-NTVPSKETSSXXXXXXXXXXXDREQDP 358
            L+R    CPLCR+ LS SDLFSAPPE S SD+ NT     TSS            R ++P
Sbjct: 583  LQRAKQCCPLCRRPLSVSDLFSAPPESSGSDNANTSSRTTTSSKVSALIKLLIASRVENP 642

Query: 359  STKSVIFSQFRKMLILLEQPLKASGFSILRLDGSMTAKKRAEVIDEFGNRDSGSPTVLLA 538
            + KSV+FSQF+KML+LLE+PLK +GF ILRLDGSM AKKRA+VI +FG      PTVLLA
Sbjct: 643  ARKSVVFSQFQKMLVLLEEPLKEAGFKILRLDGSMNAKKRAQVIKQFGVPGPDGPTVLLA 702

Query: 539  SIKASGAGINLTVASRVYLLEPWW 610
            S+KASGAGINL VASRVYLLEPWW
Sbjct: 703  SLKASGAGINLAVASRVYLLEPWW 726


>ref|XP_002517285.1| helicase, putative [Ricinus communis] gi|223543548|gb|EEF45078.1|
           helicase, putative [Ricinus communis]
          Length = 363

 Score =  261 bits (667), Expect = 7e-68
 Identities = 130/205 (63%), Positives = 156/205 (76%), Gaps = 2/205 (0%)
 Frame = +2

Query: 2   SLLPSSNIEDVSNNPEXXXXXXXXXQDGDDFDCPICISPPTNTVITRCAHVFCRSCILKA 181
           +LLPS++IEDVSNNPE         QDG+DFDCPICISPP +TVITRCAHVFCR CILK 
Sbjct: 87  ALLPSNSIEDVSNNPELLEKVVAVLQDGEDFDCPICISPPIDTVITRCAHVFCRPCILKT 146

Query: 182 LKRPNPSCPLCRQTLSESDLFSAPPEPSDSDDNTVPS--KETSSXXXXXXXXXXXDREQD 355
           L+R  P CPLCR++L+ SDLFSAPPE S +D+  + S  + TSS            R+++
Sbjct: 147 LQRMKPCCPLCRRSLTMSDLFSAPPESSHTDNTEISSSKRNTSSKVSALLNLLMAARDKN 206

Query: 356 PSTKSVIFSQFRKMLILLEQPLKASGFSILRLDGSMTAKKRAEVIDEFGNRDSGSPTVLL 535
           P+ KSVIFSQF+KML+LLE+PLKA+GF ILRLDG+M AKK+A+VI EFG      PTVLL
Sbjct: 207 PTAKSVIFSQFQKMLVLLEEPLKAAGFKILRLDGTMNAKKKAQVIKEFGIPGPNGPTVLL 266

Query: 536 ASIKASGAGINLTVASRVYLLEPWW 610
           AS+KAS AGINL  AS+VYLLEPWW
Sbjct: 267 ASLKASCAGINLAAASKVYLLEPWW 291


>ref|NP_196132.2| DNA/RNA helicase [Arabidopsis thaliana] gi|20260624|gb|AAM13210.1|
            helicase-like transcription factor-like protein
            [Arabidopsis thaliana] gi|31711770|gb|AAP68241.1|
            At5g05130 [Arabidopsis thaliana]
            gi|332003449|gb|AED90832.1| DNA/RNA helicase [Arabidopsis
            thaliana]
          Length = 862

 Score =  252 bits (644), Expect = 3e-65
 Identities = 121/206 (58%), Positives = 150/206 (72%), Gaps = 3/206 (1%)
 Frame = +2

Query: 2    SLLPSSNIEDVSNNPEXXXXXXXXXQDGDDFDCPICISPPTNTVITRCAHVFCRSCILKA 181
            S   S+++EDV++ PE         QDG+DFDCPICISPPTN +ITRCAH+FCR+CIL+ 
Sbjct: 584  SFTTSTSVEDVTDKPELLQKLVAALQDGEDFDCPICISPPTNIIITRCAHIFCRACILQT 643

Query: 182  LKRPNPSCPLCRQTLSESDLFSAPPEPSDS---DDNTVPSKETSSXXXXXXXXXXXDREQ 352
            L+R  P CPLCR +L++SDL++APP P DS   D     S   SS            R++
Sbjct: 644  LQRSKPLCPLCRGSLTQSDLYNAPPPPPDSSNTDGEDAKSSTKSSKVSALLSLLMASRQE 703

Query: 353  DPSTKSVIFSQFRKMLILLEQPLKASGFSILRLDGSMTAKKRAEVIDEFGNRDSGSPTVL 532
            +P+TKSV+FSQFRKML+LLE PLKA+GF+ILRLDG+MT KKR +VI EFGN +   P VL
Sbjct: 704  NPNTKSVVFSQFRKMLLLLETPLKAAGFTILRLDGAMTVKKRTQVIGEFGNPELTGPVVL 763

Query: 533  LASIKASGAGINLTVASRVYLLEPWW 610
            LAS+KASG GINLT ASRVYL +PWW
Sbjct: 764  LASLKASGTGINLTAASRVYLFDPWW 789


>sp|Q9FF61.1|SM3L1_ARATH RecName: Full=Putative SWI/SNF-related matrix-associated
            actin-dependent regulator of chromatin subfamily A member
            3-like 1; Short=SMARCA3-like protein 1
            gi|10178052|dbj|BAB11535.1| helicase-like transcription
            factor-like protein [Arabidopsis thaliana]
          Length = 881

 Score =  252 bits (644), Expect = 3e-65
 Identities = 121/206 (58%), Positives = 150/206 (72%), Gaps = 3/206 (1%)
 Frame = +2

Query: 2    SLLPSSNIEDVSNNPEXXXXXXXXXQDGDDFDCPICISPPTNTVITRCAHVFCRSCILKA 181
            S   S+++EDV++ PE         QDG+DFDCPICISPPTN +ITRCAH+FCR+CIL+ 
Sbjct: 603  SFTTSTSVEDVTDKPELLQKLVAALQDGEDFDCPICISPPTNIIITRCAHIFCRACILQT 662

Query: 182  LKRPNPSCPLCRQTLSESDLFSAPPEPSDS---DDNTVPSKETSSXXXXXXXXXXXDREQ 352
            L+R  P CPLCR +L++SDL++APP P DS   D     S   SS            R++
Sbjct: 663  LQRSKPLCPLCRGSLTQSDLYNAPPPPPDSSNTDGEDAKSSTKSSKVSALLSLLMASRQE 722

Query: 353  DPSTKSVIFSQFRKMLILLEQPLKASGFSILRLDGSMTAKKRAEVIDEFGNRDSGSPTVL 532
            +P+TKSV+FSQFRKML+LLE PLKA+GF+ILRLDG+MT KKR +VI EFGN +   P VL
Sbjct: 723  NPNTKSVVFSQFRKMLLLLETPLKAAGFTILRLDGAMTVKKRTQVIGEFGNPELTGPVVL 782

Query: 533  LASIKASGAGINLTVASRVYLLEPWW 610
            LAS+KASG GINLT ASRVYL +PWW
Sbjct: 783  LASLKASGTGINLTAASRVYLFDPWW 808


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