BLASTX nr result

ID: Aconitum21_contig00010532 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00010532
         (1007 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143411.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   403   e-110
ref|XP_003536072.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   395   e-107
ref|XP_002530611.1| dead box ATP-dependent RNA helicase, putativ...   382   e-104
gb|ABK92556.1| unknown [Populus trichocarpa]                          380   e-103
ref|XP_003591129.1| DEAD-box ATP-dependent RNA helicase [Medicag...   378   e-102

>ref|XP_004143411.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 16-like [Cucumis
            sativus] gi|449508529|ref|XP_004163338.1| PREDICTED:
            DEAD-box ATP-dependent RNA helicase 16-like [Cucumis
            sativus]
          Length = 596

 Score =  403 bits (1036), Expect = e-110
 Identities = 204/295 (69%), Positives = 234/295 (79%)
 Frame = +2

Query: 122  LGLDPRLIRSLTKKDISTPTPIQRVAIPLILEGKDVVAQAKTGSGKTFAYILPLLQKLFS 301
            LGLDPRL+R+L KK+I  PTPIQ VAIPLILEGKDVVA+AKTGSGKTFAY+LPLLQKLF+
Sbjct: 26   LGLDPRLVRALIKKEIQKPTPIQHVAIPLILEGKDVVARAKTGSGKTFAYLLPLLQKLFT 85

Query: 302  ESSSAAKTAPSVIILVPTRELSQQVYSELLSLIESCRVQLKVVQLTSGTHAADLRAALTG 481
             SS+  K+ PS ++LVPTRELSQQVY E+ SLIE+CRVQ+KV QLTS    +DLR AL G
Sbjct: 86   GSSTKKKSGPSAVVLVPTRELSQQVYKEISSLIETCRVQVKVAQLTSSMSHSDLRTALAG 145

Query: 482  PPDILVSTPACISTCISKNALPAQSIKDSLSVLVLDEADLLLSYGYEDDLNALVHHVPRR 661
            PPDI+V+TPACI  C+S   L   SI +SL +LVLDEADLLLSYGYEDD+ A   HVPR 
Sbjct: 146  PPDIIVATPACIPKCLSAGVLQPTSINESLEILVLDEADLLLSYGYEDDIKAFAAHVPRS 205

Query: 662  CQCLLMSATLSADIEKLKKLVLHNPVSLTLTDVGDKKDEIIPNNVQQYWISCSARDKXXX 841
            CQCLLMSAT S D+EKLKKL+LHNP  LTL +VGD KD++IP NVQQ+ ISC ARDK   
Sbjct: 206  CQCLLMSATSSEDVEKLKKLILHNPFILTLPEVGDVKDDLIPKNVQQFSISCDARDKLLH 265

Query: 842  XXXXXXXXXXXXXXXIFVNAIDMGFRLKLFLEQFGLRSAILNAELPQNSRLHILE 1006
                           IF N+IDMGFRLKLFLE+FG++SAILNAELPQNSRLHILE
Sbjct: 266  ILSLLKLDLVQKKVLIFTNSIDMGFRLKLFLEKFGIKSAILNAELPQNSRLHILE 320


>ref|XP_003536072.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 16-like [Glycine max]
          Length = 601

 Score =  395 bits (1014), Expect = e-107
 Identities = 202/295 (68%), Positives = 230/295 (77%)
 Frame = +2

Query: 122  LGLDPRLIRSLTKKDISTPTPIQRVAIPLILEGKDVVAQAKTGSGKTFAYILPLLQKLFS 301
            LG+D RL+R+L KK I  PTPIQRVAIPLILEGKDVVA+AKTGSGKT AY+LPLLQKLF+
Sbjct: 27   LGVDARLLRALIKKRIEKPTPIQRVAIPLILEGKDVVARAKTGSGKTLAYLLPLLQKLFT 86

Query: 302  ESSSAAKTAPSVIILVPTRELSQQVYSELLSLIESCRVQLKVVQLTSGTHAADLRAALTG 481
             +S   K AP+  +LVPTRELSQQVY+E+ SL+E CRVQLKVVQL S   A DLRAAL G
Sbjct: 87   ANSDRKKLAPNAFVLVPTRELSQQVYAEVKSLVELCRVQLKVVQLNSNMLANDLRAALAG 146

Query: 482  PPDILVSTPACISTCISKNALPAQSIKDSLSVLVLDEADLLLSYGYEDDLNALVHHVPRR 661
            PPDIL+STPAC++ C+S   L A SI  SL  LVLDEADLLLSYGYE+D+ AL  HVPR 
Sbjct: 147  PPDILISTPACVAKCLSCGVLQAASINASLETLVLDEADLLLSYGYENDIKALTPHVPRS 206

Query: 662  CQCLLMSATLSADIEKLKKLVLHNPVSLTLTDVGDKKDEIIPNNVQQYWISCSARDKXXX 841
            CQCLLMSAT SAD++KLKKL+LHNP  LTL +VG+ KDE+IP NVQQ+WISC A DK   
Sbjct: 207  CQCLLMSATSSADVDKLKKLILHNPFILTLPEVGNHKDEVIPKNVQQFWISCPASDKLLY 266

Query: 842  XXXXXXXXXXXXXXXIFVNAIDMGFRLKLFLEQFGLRSAILNAELPQNSRLHILE 1006
                           IF N IDM FRLKLFLE+FG+RSA+LN ELPQNSRLHILE
Sbjct: 267  ILAVLKLGLVQKKVLIFTNTIDMSFRLKLFLEKFGIRSAVLNPELPQNSRLHILE 321


>ref|XP_002530611.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223529859|gb|EEF31791.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 616

 Score =  382 bits (981), Expect = e-104
 Identities = 199/297 (67%), Positives = 230/297 (77%), Gaps = 2/297 (0%)
 Frame = +2

Query: 122  LGLDPRLIRSLTKKDIST--PTPIQRVAIPLILEGKDVVAQAKTGSGKTFAYILPLLQKL 295
            LGLDPRLIR+L KK+IS   PTPIQRVAIPLILEGKDVVA+AKTGSGKT AY+LPLLQKL
Sbjct: 41   LGLDPRLIRALNKKEISIRKPTPIQRVAIPLILEGKDVVARAKTGSGKTLAYLLPLLQKL 100

Query: 296  FSESSSAAKTAPSVIILVPTRELSQQVYSELLSLIESCRVQLKVVQLTSGTHAADLRAAL 475
            FS+S S  K APS  ILVP+ EL QQVY E+ +LI+ C+VQLK VQLTS    +DLR A+
Sbjct: 101  FSDSGSKKKLAPSAFILVPSGELCQQVYKEVSALIDWCKVQLKAVQLTSKMSGSDLRTAI 160

Query: 476  TGPPDILVSTPACISTCISKNALPAQSIKDSLSVLVLDEADLLLSYGYEDDLNALVHHVP 655
             GPPDIL+S+PA ++ C+S   L + SI DSL +LVLDEADLLLS+GYEDDL AL   +P
Sbjct: 161  AGPPDILISSPASLAKCLSVGLLQSASINDSLEILVLDEADLLLSFGYEDDLRALTALIP 220

Query: 656  RRCQCLLMSATLSADIEKLKKLVLHNPVSLTLTDVGDKKDEIIPNNVQQYWISCSARDKX 835
            RRCQCLLMSAT S D++KLKKL+LHNP  LTL +V   KDE IP NVQQ+WISCS RDK 
Sbjct: 221  RRCQCLLMSATSSDDVDKLKKLMLHNPYILTLPEVEGNKDEAIPKNVQQFWISCSGRDKL 280

Query: 836  XXXXXXXXXXXXXXXXXIFVNAIDMGFRLKLFLEQFGLRSAILNAELPQNSRLHILE 1006
                             IF N+IDM FRL+LFLE+FG++SAILNAELPQNSRLHILE
Sbjct: 281  VHILALLKLDLVQKKVLIFTNSIDMSFRLRLFLEKFGIKSAILNAELPQNSRLHILE 337


>gb|ABK92556.1| unknown [Populus trichocarpa]
          Length = 619

 Score =  380 bits (976), Expect = e-103
 Identities = 200/298 (67%), Positives = 232/298 (77%), Gaps = 3/298 (1%)
 Frame = +2

Query: 122  LGLDPRLIRSLTKKDIST--PTPIQRVAIPLILEGKDVVAQAKTGSGKTFAYILPLLQKL 295
            LGLDPRLIR+L KK+IS   PTPIQR AIPLIL+GKDVVA+AKTGSGKT AY+LPLLQKL
Sbjct: 43   LGLDPRLIRALNKKEISIAEPTPIQRAAIPLILQGKDVVARAKTGSGKTLAYLLPLLQKL 102

Query: 296  FSES-SSAAKTAPSVIILVPTRELSQQVYSELLSLIESCRVQLKVVQLTSGTHAADLRAA 472
             S + S+  K +PS  ILVP+ EL QQVY E+ SLI+SC+ QLKVVQLTS   A+DLR A
Sbjct: 103  LSTADSNRKKLSPSAFILVPSGELCQQVYKEVSSLIDSCKAQLKVVQLTSNMPASDLRNA 162

Query: 473  LTGPPDILVSTPACISTCISKNALPAQSIKDSLSVLVLDEADLLLSYGYEDDLNALVHHV 652
            L GPPDILVSTP+C++  +S   L ++SI DSL +LVLDEADLLLS+GYE+DL AL   V
Sbjct: 163  LAGPPDILVSTPSCVAKSLSVGVLKSESINDSLEILVLDEADLLLSFGYEEDLKALTALV 222

Query: 653  PRRCQCLLMSATLSADIEKLKKLVLHNPVSLTLTDVGDKKDEIIPNNVQQYWISCSARDK 832
            PRRCQCLLMSAT SAD++KLKKLVLHNP  LTL +V   KDE+IP NVQQ+W+SC  RDK
Sbjct: 223  PRRCQCLLMSATSSADVDKLKKLVLHNPYVLTLPEVEGVKDEVIPKNVQQFWVSCGDRDK 282

Query: 833  XXXXXXXXXXXXXXXXXXIFVNAIDMGFRLKLFLEQFGLRSAILNAELPQNSRLHILE 1006
                              IF NAIDM FRLKLFLE+FG++SA+LNAELPQNSRLHILE
Sbjct: 283  LVHILALLKLDLVQKKVLIFTNAIDMSFRLKLFLEKFGIKSAVLNAELPQNSRLHILE 340


>ref|XP_003591129.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
            gi|355480177|gb|AES61380.1| DEAD-box ATP-dependent RNA
            helicase [Medicago truncatula]
          Length = 604

 Score =  378 bits (971), Expect = e-102
 Identities = 191/295 (64%), Positives = 225/295 (76%)
 Frame = +2

Query: 122  LGLDPRLIRSLTKKDISTPTPIQRVAIPLILEGKDVVAQAKTGSGKTFAYILPLLQKLFS 301
            LGLD RL+R+L KK I  PTPIQ VAIPLILEGKDVVA+AKTGSGKT AY+LPLLQKLF+
Sbjct: 30   LGLDARLVRALLKKRIEKPTPIQHVAIPLILEGKDVVARAKTGSGKTLAYLLPLLQKLFT 89

Query: 302  ESSSAAKTAPSVIILVPTRELSQQVYSELLSLIESCRVQLKVVQLTSGTHAADLRAALTG 481
             +    K AP+V +L P+REL QQ+Y E+ SL+E C+V LK VQL S   A DL+AAL G
Sbjct: 90   ANVDRKKLAPNVFVLAPSRELCQQIYVEVKSLLELCKVPLKAVQLNSNMLATDLQAALVG 149

Query: 482  PPDILVSTPACISTCISKNALPAQSIKDSLSVLVLDEADLLLSYGYEDDLNALVHHVPRR 661
            PPD+L+STPACI+ C+S + L A SI  SL  LVLDEADLLLSYGYE+D+ AL  H+PR 
Sbjct: 150  PPDVLISTPACIAKCLSNSVLQAASINGSLETLVLDEADLLLSYGYENDIKALTPHIPRS 209

Query: 662  CQCLLMSATLSADIEKLKKLVLHNPVSLTLTDVGDKKDEIIPNNVQQYWISCSARDKXXX 841
            CQCLLMSAT S D++KLKKL+LHNPV LTL +VG++KDE+IP NVQQ+WI C A DK   
Sbjct: 210  CQCLLMSATSSDDVDKLKKLMLHNPVILTLPEVGNRKDEVIPKNVQQFWIYCPANDKLLY 269

Query: 842  XXXXXXXXXXXXXXXIFVNAIDMGFRLKLFLEQFGLRSAILNAELPQNSRLHILE 1006
                           IF N ID  FRLKLFLE+FG++SA+LNAELPQNSRLHILE
Sbjct: 270  ILAMLKLELVQKKVLIFTNNIDTSFRLKLFLEKFGIKSAVLNAELPQNSRLHILE 324


Top