BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00010443
         (1282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270559.1| PREDICTED: DNA-directed RNA polymerases I an...   601   e-169
ref|XP_002522786.1| DNA-directed RNA polymerase I/III subunits, ...   569   e-160
ref|XP_004148257.1| PREDICTED: DNA-directed RNA polymerases I an...   542   e-152
ref|NP_001242652.1| uncharacterized protein LOC100786622 [Glycin...   536   e-150
ref|XP_003532185.1| PREDICTED: DNA-directed RNA polymerases I an...   535   e-150

>ref|XP_002270559.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1
            [Vitis vinifera] gi|296089944|emb|CBI39763.3| unnamed
            protein product [Vitis vinifera]
          Length = 372

 Score =  601 bits (1550), Expect = e-169
 Identities = 292/370 (78%), Positives = 327/370 (88%)
 Frame = -3

Query: 1256 RISALDMPDVPMGQLPPHLQLQRTRVVCASDAPIHTESIQYSGAYASLGVDNSLLMDTFI 1077
            R  ALDMPDVP GQLPPH++LQRTRV+C  DAP HTE++QYSGAY+S+GVDNSL MD F 
Sbjct: 3    RSPALDMPDVPKGQLPPHIELQRTRVLCNFDAPTHTENVQYSGAYSSMGVDNSLRMDQFC 62

Query: 1076 KNFKVQVIRLSQDDMEFDMIGIDASIANAFRRILISEVPTMAIEKVLIANNTSVVQDEVL 897
             NF+V+VIRLS+DDMEFDMIGID SIANAFRRILI+E+PTMAIEKVLIANNTS+VQDEVL
Sbjct: 63   NNFRVEVIRLSEDDMEFDMIGIDPSIANAFRRILIAELPTMAIEKVLIANNTSIVQDEVL 122

Query: 896  AHRLGLIPIKVDPRLFEYKSENDTPNEKNTIVFKLHVRCTRGSPRITVKSDELRWLPSGS 717
            AHRLGLIPI  DPRLF+  SENDTPNEKNTIVF LHVRC RG PR+TVKS+EL+WLP GS
Sbjct: 123  AHRLGLIPINADPRLFDDLSENDTPNEKNTIVFNLHVRCERGGPRLTVKSNELKWLPHGS 182

Query: 716  SFEIETGNPPSDQKSKSKTYTSFSRSQDSMPEFANNPIGPKHEDIIISKLGPGQEIELEA 537
             F + T N  S   SK KTYTSFS SQDS+PEF++  IGPKH DIII+KLGPGQEIELEA
Sbjct: 183  EFPLATENTTSSSTSKPKTYTSFSCSQDSLPEFSDKSIGPKHPDIIIAKLGPGQEIELEA 242

Query: 536  HAVKGIGKTHAKWSPVCTAWYRMLPEVELLQDIEDEMAKELVVKCPVGVFDIEDIGKGKK 357
            HAVKG+GKTHAKWSPV TAWYRMLPEV LLQ+IEDE A+ELV KCPV VFDIEDI KGKK
Sbjct: 243  HAVKGMGKTHAKWSPVATAWYRMLPEVVLLQEIEDEKAEELVKKCPVNVFDIEDIAKGKK 302

Query: 356  RATVAKPRACTLCRECIRGEGWENRVALRRVKDHFIFTIESSGALPPEVLFTEALKILED 177
            +ATVA+PRACTLCRECIRG+ W+  VA+RRVK+HFIFTIES+GALPPEVLF EA+K+LED
Sbjct: 303  KATVARPRACTLCRECIRGDDWDKHVAIRRVKNHFIFTIESTGALPPEVLFNEAVKVLED 362

Query: 176  KCERVISELS 147
            KCERVI+ELS
Sbjct: 363  KCERVITELS 372


>ref|XP_002522786.1| DNA-directed RNA polymerase I/III subunits, putative [Ricinus
            communis] gi|223538024|gb|EEF39637.1| DNA-directed RNA
            polymerase I/III subunits, putative [Ricinus communis]
          Length = 374

 Score =  569 bits (1467), Expect = e-160
 Identities = 282/375 (75%), Positives = 319/375 (85%)
 Frame = -3

Query: 1271 EQAKKRISALDMPDVPMGQLPPHLQLQRTRVVCASDAPIHTESIQYSGAYASLGVDNSLL 1092
            ++  K+ S  D+PDVPMGQLPPHLQLQRTRVVC SDAPIHT++I YSGAYAS+GVDNSL 
Sbjct: 8    KEKNKKFSIWDLPDVPMGQLPPHLQLQRTRVVCKSDAPIHTDNIVYSGAYASIGVDNSLQ 67

Query: 1091 MDTFIKNFKVQVIRLSQDDMEFDMIGIDASIANAFRRILISEVPTMAIEKVLIANNTSVV 912
            +D F  NFKV+VI+L++DDMEFDMIGIDA+IANAFRRILISE+PTMAIEKVLIANNTS++
Sbjct: 68   LDCFRDNFKVEVIQLTKDDMEFDMIGIDAAIANAFRRILISELPTMAIEKVLIANNTSLI 127

Query: 911  QDEVLAHRLGLIPIKVDPRLFEYKSENDTPNEKNTIVFKLHVRCTRGSPRITVKSDELRW 732
            QDEVLAHRLGLIPI  DPRLFEY S NDTPNEKNTIVFKLH  C RG PR TV S+EL+W
Sbjct: 128  QDEVLAHRLGLIPINADPRLFEYLSANDTPNEKNTIVFKLHASCKRGEPRRTVYSEELKW 187

Query: 731  LPSGSSFEIETGNPPSDQKSKSKTYTSFSRSQDSMPEFANNPIGPKHEDIIISKLGPGQE 552
            LP GS    E+        SK  TYTSF+  QD +P+    P+ P  + II++KLGPGQE
Sbjct: 188  LPGGSQLLKES----EKADSKPSTYTSFTDKQDFIPK----PVSPSEDKIIVAKLGPGQE 239

Query: 551  IELEAHAVKGIGKTHAKWSPVCTAWYRMLPEVELLQDIEDEMAKELVVKCPVGVFDIEDI 372
            IELEAHAVKG+GKTHAKWSPV TAWYRMLPEV LL+DIEDE+A+EL  KCPV VFDIEDI
Sbjct: 240  IELEAHAVKGLGKTHAKWSPVATAWYRMLPEVVLLEDIEDEIAEELTKKCPVNVFDIEDI 299

Query: 371  GKGKKRATVAKPRACTLCRECIRGEGWENRVALRRVKDHFIFTIESSGALPPEVLFTEAL 192
            G GKKRATVA+PRACTLCRECIRG  W+ RV+LRRVKDHFIFTIES+GALPPEVLFTEA+
Sbjct: 300  GNGKKRATVARPRACTLCRECIRGGEWDKRVSLRRVKDHFIFTIESTGALPPEVLFTEAV 359

Query: 191  KILEDKCERVISELS 147
            K+LEDKCERVI+ELS
Sbjct: 360  KVLEDKCERVITELS 374


>ref|XP_004148257.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
            [Cucumis sativus] gi|449522768|ref|XP_004168398.1|
            PREDICTED: DNA-directed RNA polymerases I and III subunit
            RPAC1-like [Cucumis sativus]
          Length = 391

 Score =  542 bits (1396), Expect = e-152
 Identities = 269/367 (73%), Positives = 317/367 (86%), Gaps = 1/367 (0%)
 Frame = -3

Query: 1244 LDMPDVPMGQLPPHLQLQRTRVVCASDAPIHTESIQYSGAYASLGVDNSLLMDTFIKNFK 1065
            +++PDVPM +LPPH++LQRTRV C +DAPIHT++IQYSGA+AS+G DNSL +D F  NFK
Sbjct: 30   MNLPDVPM-KLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGFDNSLRLDNFRNNFK 88

Query: 1064 VQVIRLSQDDMEFDMIGIDASIANAFRRILISEVPTMAIEKVLIANNTSVVQDEVLAHRL 885
            ++VI L +DD+EFDMIGID ++ANAFRRILISEVPTMAIEKVL ANNTS+VQDEVLAHRL
Sbjct: 89   IEVIDLKEDDIEFDMIGIDPALANAFRRILISEVPTMAIEKVLFANNTSIVQDEVLAHRL 148

Query: 884  GLIPIKVDPRLFEYKSENDTPNEKNTIVFKLHVRCTRGSPRITVKSDELRWLPSGSSFEI 705
            GL+PI+VDPRLF+Y S+ D PNE NTIVF+LH  C RG PR+TV S  L WLP+GS F +
Sbjct: 149  GLVPIRVDPRLFKY-SDKDAPNENNTIVFRLHACCERGKPRLTVTSKALTWLPNGSEFPL 207

Query: 704  ETGNPPSDQKSKSKTYTSFSRSQDSM-PEFANNPIGPKHEDIIISKLGPGQEIELEAHAV 528
             +    S+  SK KTYTSFS SQ+++  EF+NNPIGPK  DII+++LGPGQEIELEAHAV
Sbjct: 208  VSDKSVSN--SKPKTYTSFSCSQNTLSKEFSNNPIGPKDSDIILARLGPGQEIELEAHAV 265

Query: 527  KGIGKTHAKWSPVCTAWYRMLPEVELLQDIEDEMAKELVVKCPVGVFDIEDIGKGKKRAT 348
            KG+GKTHAKWSPV TAWYRMLPEV L+++IEDE+A+EL  KCPV VFDIEDI  GKKRAT
Sbjct: 266  KGMGKTHAKWSPVATAWYRMLPEVVLMEEIEDELAEELEKKCPVNVFDIEDIA-GKKRAT 324

Query: 347  VAKPRACTLCRECIRGEGWENRVALRRVKDHFIFTIESSGALPPEVLFTEALKILEDKCE 168
            VA+PR CTLCRECIRG+ WE RVALRRVKDHFIF IES+GALPPEVLFTEA+KILEDKCE
Sbjct: 325  VARPRDCTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCE 384

Query: 167  RVISELS 147
            R+I+ELS
Sbjct: 385  RLIAELS 391


>ref|NP_001242652.1| uncharacterized protein LOC100786622 [Glycine max]
            gi|255637183|gb|ACU18922.1| unknown [Glycine max]
          Length = 388

 Score =  536 bits (1382), Expect = e-150
 Identities = 269/368 (73%), Positives = 318/368 (86%), Gaps = 2/368 (0%)
 Frame = -3

Query: 1244 LDMPDVPMGQLPPHLQLQRTRVVCASDAPIHTESIQYSGAYASLGVDNSLLMDTFIKNFK 1065
            L + +VP  +LPPHL+L +TRV+C +DAP+HT+++QYSGAYA LGVDNS+ +D+F +NFK
Sbjct: 24   LSLDNVP-SKLPPHLELFKTRVLCNNDAPVHTDTVQYSGAYAILGVDNSVRLDSFCENFK 82

Query: 1064 VQVIRLSQDDMEFDMIGIDASIANAFRRILISEVPTMAIEKVLIANNTSVVQDEVLAHRL 885
            V+V RL+  D+EFDMIGID +IANAFRRILI+EVPTMAIE+V IANNTSVVQDEVL+HRL
Sbjct: 83   VEVKRLTDSDIEFDMIGIDPAIANAFRRILIAEVPTMAIERVYIANNTSVVQDEVLSHRL 142

Query: 884  GLIPIKVDPRLFEY-KSENDTPNEKNTIVFKLHVRCTRGSPRITVKSDELRWLPSGSSFE 708
            GLIPI+ DPRLFEY ++  D  NEKNTIVFKLHVRC  G PRITVKSD+L+WLP+GS   
Sbjct: 143  GLIPIRADPRLFEYPENAGDDKNEKNTIVFKLHVRCQVGQPRITVKSDKLKWLPNGSELP 202

Query: 707  IETGNPPSDQKSKSKTYTSFSRSQDSMPEFANNPIGPKHEDIIISKLGPGQEIELEAHAV 528
             E   P +   SK KT+TSF+ SQDS+PEF+NN IG  + DII++KLGPGQEIELEAHAV
Sbjct: 203  CEGVKPNAG--SKPKTFTSFTCSQDSLPEFSNNSIGLTYSDIILAKLGPGQEIELEAHAV 260

Query: 527  KGIGKTHAKWSPVCTAWYRMLPEVELLQDIEDEMAKELVVKCPVGVFDIEDIGKGKKRAT 348
            KGIGKTHAKWSPV TAWYRMLPEV LL+ +EDE+A+EL  KCPV VFDIEDIGKGK+RA 
Sbjct: 261  KGIGKTHAKWSPVATAWYRMLPEVVLLEAVEDELAEELKNKCPVNVFDIEDIGKGKRRAK 320

Query: 347  VAKPRACTLCRECIR-GEGWENRVALRRVKDHFIFTIESSGALPPEVLFTEALKILEDKC 171
            VA+PR CTLCRECIR G+ WE+RV+LRRVK+HFIFTIES+GALPPEVLFTEA+KILEDKC
Sbjct: 321  VARPRDCTLCRECIRGGKEWEDRVSLRRVKNHFIFTIESTGALPPEVLFTEAVKILEDKC 380

Query: 170  ERVISELS 147
            ERVI+ELS
Sbjct: 381  ERVITELS 388


>ref|XP_003532185.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
            [Glycine max]
          Length = 393

 Score =  535 bits (1379), Expect = e-150
 Identities = 267/368 (72%), Positives = 317/368 (86%), Gaps = 2/368 (0%)
 Frame = -3

Query: 1244 LDMPDVPMGQLPPHLQLQRTRVVCASDAPIHTESIQYSGAYASLGVDNSLLMDTFIKNFK 1065
            L + +VP  +LPPHL+L +TRV+C +DAP+HT+++QYSGAYA +GVDNS+ +D+F +NFK
Sbjct: 29   LSLDNVP-SKLPPHLELFKTRVLCNNDAPVHTDTVQYSGAYAIMGVDNSVRLDSFCENFK 87

Query: 1064 VQVIRLSQDDMEFDMIGIDASIANAFRRILISEVPTMAIEKVLIANNTSVVQDEVLAHRL 885
            V+V RL+  D+EFDMIGID +IANAFRRILI+EVPTMAIE+V IANNTSVVQDEVL+HRL
Sbjct: 88   VEVKRLTDSDIEFDMIGIDPAIANAFRRILIAEVPTMAIERVYIANNTSVVQDEVLSHRL 147

Query: 884  GLIPIKVDPRLFEY-KSENDTPNEKNTIVFKLHVRCTRGSPRITVKSDELRWLPSGSSFE 708
            GLIPI+ DPRLFEY ++  D  NEKNTIVFKLHVRC  G PRITVKSD+L+WLP+GS   
Sbjct: 148  GLIPIRADPRLFEYPENAGDDKNEKNTIVFKLHVRCQVGQPRITVKSDKLKWLPNGSELP 207

Query: 707  IETGNPPSDQKSKSKTYTSFSRSQDSMPEFANNPIGPKHEDIIISKLGPGQEIELEAHAV 528
             E   P +   SK KT+TSF+ SQDS+PEF+NN IG  + DII++KLGPGQEIELEAHAV
Sbjct: 208  CEDVKPNAG--SKPKTFTSFTCSQDSLPEFSNNSIGLTYSDIILAKLGPGQEIELEAHAV 265

Query: 527  KGIGKTHAKWSPVCTAWYRMLPEVELLQDIEDEMAKELVVKCPVGVFDIEDIGKGKKRAT 348
            KG GKTHAKWSPV T WYRMLPEV LL+D+EDE+A+EL  KCPV VFDIEDIGKGK+RA 
Sbjct: 266  KGTGKTHAKWSPVATTWYRMLPEVVLLKDVEDELAEELKNKCPVNVFDIEDIGKGKRRAK 325

Query: 347  VAKPRACTLCRECIR-GEGWENRVALRRVKDHFIFTIESSGALPPEVLFTEALKILEDKC 171
            VA+PR CTLCRECIR G+ WE+RV+LRRVK+HFIFTIES+GALPPEVLFTEA+KILEDKC
Sbjct: 326  VARPRDCTLCRECIRGGKEWEDRVSLRRVKNHFIFTIESTGALPPEVLFTEAVKILEDKC 385

Query: 170  ERVISELS 147
            ERVI+ELS
Sbjct: 386  ERVITELS 393