BLASTX nr result

ID: Aconitum21_contig00010404 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00010404
         (844 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536433.1| PREDICTED: eukaryotic translation initiation...    60   8e-07
ref|XP_003592124.1| Eukaryotic translation initiation factor 5B ...    60   8e-07
ref|XP_002318326.1| predicted protein [Populus trichocarpa] gi|2...    57   5e-06

>ref|XP_003536433.1| PREDICTED: eukaryotic translation initiation factor 5B-like
           [Glycine max]
          Length = 1344

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 30/55 (54%), Positives = 41/55 (74%), Gaps = 2/55 (3%)
 Frame = -3

Query: 641 MGRKKPTPVDENPPTQ--GGGKSKKKSRVIDDDEYTIGSEVYEDQSHKNPEEELA 483
           MG+KKPT  DE   +Q  GGGKSKKK+ VIDDDEY++G+E+ E+Q+  + E+  A
Sbjct: 1   MGKKKPTARDEENASQQGGGGKSKKKAVVIDDDEYSVGTELSEEQAPASEEKPAA 55


>ref|XP_003592124.1| Eukaryotic translation initiation factor 5B [Medicago truncatula]
           gi|355481172|gb|AES62375.1| Eukaryotic translation
           initiation factor 5B [Medicago truncatula]
          Length = 1438

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 30/44 (68%), Positives = 34/44 (77%), Gaps = 2/44 (4%)
 Frame = -3

Query: 641 MGRKKPTPVDEN--PPTQGGGKSKKKSRVIDDDEYTIGSEVYED 516
           MG+KKP   D+   PP QGGGKSKKK+ VIDDDEY+IG EV ED
Sbjct: 1   MGKKKPAIRDDENPPPQQGGGKSKKKAPVIDDDEYSIGVEVSED 44


>ref|XP_002318326.1| predicted protein [Populus trichocarpa] gi|222858999|gb|EEE96546.1|
           predicted protein [Populus trichocarpa]
          Length = 1331

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 31/57 (54%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
 Frame = -3

Query: 641 MGRKKPTPVDE-NPPTQGGGKSKKKSRVIDDDEYTIGSEVYEDQSHKNPEEELAVAT 474
           MGRKKP   DE N P  GGGKSKKK  +IDDDEY++G+E+ E+      +EE  V T
Sbjct: 1   MGRKKPAARDEENAPAGGGGKSKKKGLMIDDDEYSVGTELSEE---TQVQEEKVVIT 54


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