BLASTX nr result

ID: Aconitum21_contig00010321 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00010321
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26799.3| unnamed protein product [Vitis vinifera]              127   9e-28
ref|XP_002325475.1| predicted protein [Populus trichocarpa] gi|2...   120   1e-25
ref|XP_004142861.1| PREDICTED: THO complex subunit 2-like [Cucum...   119   3e-25
ref|XP_002328963.1| predicted protein [Populus trichocarpa] gi|2...   115   5e-24
ref|XP_003631008.1| THO complex subunit [Medicago truncatula] gi...   109   2e-22

>emb|CBI26799.3| unnamed protein product [Vitis vinifera]
          Length = 1767

 Score =  127 bits (319), Expect = 9e-28
 Identities = 57/89 (64%), Positives = 70/89 (78%)
 Frame = -1

Query: 388  SSEGGDYSSTVPPPLPLSRGMSQAYDGRDGGDRKGPLVQRAGYADDPMLRMHAKEAGSKI 209
            S E G+Y+   PPP P +  MSQAYDGR+ GDRKG +VQRAGY D+P LR+H KE   K+
Sbjct: 1679 SGEAGEYTPAAPPPPPPAISMSQAYDGRERGDRKGAMVQRAGYLDEPGLRIHGKEVTGKM 1738

Query: 208  PRRDSDQIYERDWDDEKRQRAEQKRRHSR 122
             RRD+DQ+Y+R+WDDEKRQRAEQKRRH +
Sbjct: 1739 ARRDADQMYDREWDDEKRQRAEQKRRHRK 1767


>ref|XP_002325475.1| predicted protein [Populus trichocarpa] gi|222862350|gb|EEE99856.1|
            predicted protein [Populus trichocarpa]
          Length = 1836

 Score =  120 bits (301), Expect = 1e-25
 Identities = 50/89 (56%), Positives = 67/89 (75%)
 Frame = -1

Query: 388  SSEGGDYSSTVPPPLPLSRGMSQAYDGRDGGDRKGPLVQRAGYADDPMLRMHAKEAGSKI 209
            + E G+YS   PPP PL  GMSQ+YDGRD GDRKG  +QR  Y ++P +R+H K+   K+
Sbjct: 1748 TGEAGEYSPVAPPPPPLGSGMSQSYDGRDRGDRKGGTIQRTSYLEEPSIRIHGKDVAGKM 1807

Query: 208  PRRDSDQIYERDWDDEKRQRAEQKRRHSR 122
             RRD+D +Y+R+WD++KRQRAEQKRRH +
Sbjct: 1808 ARRDADPMYDREWDEDKRQRAEQKRRHRK 1836


>ref|XP_004142861.1| PREDICTED: THO complex subunit 2-like [Cucumis sativus]
            gi|449506883|ref|XP_004162874.1| PREDICTED: THO complex
            subunit 2-like [Cucumis sativus]
          Length = 1887

 Score =  119 bits (298), Expect = 3e-25
 Identities = 52/87 (59%), Positives = 68/87 (78%)
 Frame = -1

Query: 382  EGGDYSSTVPPPLPLSRGMSQAYDGRDGGDRKGPLVQRAGYADDPMLRMHAKEAGSKIPR 203
            E G+YS   PPP P+  G+SQ+YDGR+ GDRKG ++QR GY DDP LR+H KE  +K+ R
Sbjct: 1801 EAGEYSPVGPPPPPMGGGVSQSYDGRERGDRKGVMMQRPGYLDDPGLRIHGKEVVNKMTR 1860

Query: 202  RDSDQIYERDWDDEKRQRAEQKRRHSR 122
            R++D +YER+WDDEKR RA+QKRRH +
Sbjct: 1861 READLMYEREWDDEKRMRADQKRRHRK 1887


>ref|XP_002328963.1| predicted protein [Populus trichocarpa] gi|222839197|gb|EEE77548.1|
            predicted protein [Populus trichocarpa]
          Length = 1805

 Score =  115 bits (287), Expect = 5e-24
 Identities = 48/89 (53%), Positives = 68/89 (76%)
 Frame = -1

Query: 388  SSEGGDYSSTVPPPLPLSRGMSQAYDGRDGGDRKGPLVQRAGYADDPMLRMHAKEAGSKI 209
            + E G+YS   PPP PL  G+S +YDGR+ GDRKG + QRA Y ++P++R+H K+   K+
Sbjct: 1717 TGEAGEYSPVAPPPPPLGIGISHSYDGRERGDRKGAMNQRASYLEEPLMRIHGKDVVGKM 1776

Query: 208  PRRDSDQIYERDWDDEKRQRAEQKRRHSR 122
             RRD+D +Y+R+WD++KRQRAEQKRRH +
Sbjct: 1777 GRRDTDPMYDREWDEDKRQRAEQKRRHRK 1805


>ref|XP_003631008.1| THO complex subunit [Medicago truncatula] gi|355525030|gb|AET05484.1|
            THO complex subunit [Medicago truncatula]
          Length = 2048

 Score =  109 bits (273), Expect = 2e-22
 Identities = 52/87 (59%), Positives = 65/87 (74%)
 Frame = -1

Query: 382  EGGDYSSTVPPPLPLSRGMSQAYDGRDGGDRKGPLVQRAGYADDPMLRMHAKEAGSKIPR 203
            E G+YS   PP   +  GMSQAYDGRD   RKGP++Q A Y D+P LR+H KE  SK+ R
Sbjct: 1967 EPGEYSPVAPPLSGI--GMSQAYDGRD---RKGPMIQHASYIDEPSLRIHGKEVASKLNR 2021

Query: 202  RDSDQIYERDWDDEKRQRAEQKRRHSR 122
            R+SD +Y+R+WDDEKRQRA+QKRRH +
Sbjct: 2022 RESDPLYDREWDDEKRQRADQKRRHRK 2048


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