BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00009993
         (905 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285435.1| PREDICTED: exosome complex component RRP42 [...   390   e-106
ref|XP_002321194.1| predicted protein [Populus trichocarpa] gi|2...   389   e-106
ref|XP_004155022.1| PREDICTED: exosome complex component RRP42-l...   388   e-105
ref|XP_002439072.1| hypothetical protein SORBIDRAFT_10g031070 [S...   386   e-105
gb|ACG32102.1| exosome complex exonuclease RRP42 [Zea mays] gi|4...   384   e-104

>ref|XP_002285435.1| PREDICTED: exosome complex component RRP42 [Vitis vinifera]
           gi|296082105|emb|CBI21110.3| unnamed protein product
           [Vitis vinifera]
          Length = 287

 Score =  390 bits (1001), Expect = e-106
 Identities = 200/239 (83%), Positives = 216/239 (90%)
 Frame = +1

Query: 1   VKLGGTDVIASVKAELGRPNHLYPDRGNVSIYVDCSPTAAPMFEGRGGEELSAELSVALQ 180
           V+LGGTDVIASVKAELG+P+   PD+G V+IYVDCSPTAAPMFEGRGGEELS ELS ALQ
Sbjct: 49  VRLGGTDVIASVKAELGKPSPSQPDKGKVNIYVDCSPTAAPMFEGRGGEELSTELSGALQ 108

Query: 181 RCFLGGKSGAGAGINLSSLIVVEGKMCWDLYIDGLVISSDGNLLDALGAAIKAALSNTGI 360
            C LGGKSGAGAGI+LSSL+VVEGK+CWDLYIDGLV+SSDGNLLDALGAAIKAAL+NTGI
Sbjct: 109 HCLLGGKSGAGAGIDLSSLVVVEGKVCWDLYIDGLVVSSDGNLLDALGAAIKAALTNTGI 168

Query: 361 PKVNVAVGAAADEEPEVDISDEEFLQFDTSGVPVIVTLTKVGRHYITDATLEEESQMSSA 540
           PKV VAVGA+ D  PEVDISD+E+LQFDTSGVPVIVTLTKVGRHYI DATLEEESQMSSA
Sbjct: 169 PKVEVAVGASGDGLPEVDISDDEYLQFDTSGVPVIVTLTKVGRHYIVDATLEEESQMSSA 228

Query: 541 VSVSVDRHGHICGLTKRGGAGLDPSAILDMISVSKHVSEQLMAELDSKISAAEVDEAES 717
           VSVSV   G ICGL KRGGAGLDPS ILDMISV+KHVSEQLM +LDS+ISAAE  E ES
Sbjct: 229 VSVSVSGQGRICGLIKRGGAGLDPSVILDMISVAKHVSEQLMNKLDSEISAAEAFEEES 287


>ref|XP_002321194.1| predicted protein [Populus trichocarpa] gi|222861967|gb|EEE99509.1|
           predicted protein [Populus trichocarpa]
          Length = 287

 Score =  389 bits (999), Expect = e-106
 Identities = 195/238 (81%), Positives = 216/238 (90%)
 Frame = +1

Query: 1   VKLGGTDVIASVKAELGRPNHLYPDRGNVSIYVDCSPTAAPMFEGRGGEELSAELSVALQ 180
           +++G T+VIASVKAELGRPN L PD+G V+I+VDCSP A PMFEGRGGEELSAELSVALQ
Sbjct: 49  IRIGATEVIASVKAELGRPNALQPDKGKVAIFVDCSPVAEPMFEGRGGEELSAELSVALQ 108

Query: 181 RCFLGGKSGAGAGINLSSLIVVEGKMCWDLYIDGLVISSDGNLLDALGAAIKAALSNTGI 360
           RC LGGKSGAGAGI+LSSLIV EGK+CWDLYIDGLVISSDGNLLDALGAAIKAALSNTGI
Sbjct: 109 RCLLGGKSGAGAGIDLSSLIVAEGKICWDLYIDGLVISSDGNLLDALGAAIKAALSNTGI 168

Query: 361 PKVNVAVGAAADEEPEVDISDEEFLQFDTSGVPVIVTLTKVGRHYITDATLEEESQMSSA 540
           P+V VA GA+ DE+PEVDISDEEF+QFDTSGVPVIVTLTKVGRHYI DAT EEESQMSSA
Sbjct: 169 PRVQVAAGASGDEQPEVDISDEEFMQFDTSGVPVIVTLTKVGRHYIVDATSEEESQMSSA 228

Query: 541 VSVSVDRHGHICGLTKRGGAGLDPSAILDMISVSKHVSEQLMAELDSKISAAEVDEAE 714
           VSVS+ R G ICGL+KRG AGLDPS I DMISV++H+SEQL+ +LDS+ISAAE DE E
Sbjct: 229 VSVSISRKGQICGLSKRGSAGLDPSVISDMISVARHISEQLINKLDSEISAAEADEDE 286


>ref|XP_004155022.1| PREDICTED: exosome complex component RRP42-like [Cucumis sativus]
          Length = 286

 Score =  388 bits (996), Expect = e-105
 Identities = 191/238 (80%), Positives = 217/238 (91%)
 Frame = +1

Query: 1   VKLGGTDVIASVKAELGRPNHLYPDRGNVSIYVDCSPTAAPMFEGRGGEELSAELSVALQ 180
           V++GGT+VIA+VKAELGRPN + PD+G VSI VDCSPTA P FEGRGGEELS ELS+AL+
Sbjct: 49  VRMGGTEVIATVKAELGRPNPMQPDKGKVSISVDCSPTAEPAFEGRGGEELSTELSIALE 108

Query: 181 RCFLGGKSGAGAGINLSSLIVVEGKMCWDLYIDGLVISSDGNLLDALGAAIKAALSNTGI 360
           RC LGGKSG+GAGI+LSSLIVVEGK+CWDLYI+GLV+SS+GNLLDALGAAIKAALSNTGI
Sbjct: 109 RCLLGGKSGSGAGIDLSSLIVVEGKLCWDLYIEGLVVSSEGNLLDALGAAIKAALSNTGI 168

Query: 361 PKVNVAVGAAADEEPEVDISDEEFLQFDTSGVPVIVTLTKVGRHYITDATLEEESQMSSA 540
           PKV+VA  A  +E+PEVD+SDEEFLQFDTSGVP IVTLTKVG+HYI DATLEEESQMSSA
Sbjct: 169 PKVHVAAEALDNEQPEVDVSDEEFLQFDTSGVPAIVTLTKVGKHYIVDATLEEESQMSSA 228

Query: 541 VSVSVDRHGHICGLTKRGGAGLDPSAILDMISVSKHVSEQLMAELDSKISAAEVDEAE 714
           VS+S+DRHGHICGLTKRGG G+DPS ILDMISV KHVSE+L+ +LDS+I AAE DE E
Sbjct: 229 VSISIDRHGHICGLTKRGGVGVDPSIILDMISVGKHVSEELLNKLDSEIVAAEADEEE 286


>ref|XP_002439072.1| hypothetical protein SORBIDRAFT_10g031070 [Sorghum bicolor]
           gi|241917295|gb|EER90439.1| hypothetical protein
           SORBIDRAFT_10g031070 [Sorghum bicolor]
          Length = 286

 Score =  386 bits (992), Expect = e-105
 Identities = 193/238 (81%), Positives = 219/238 (92%)
 Frame = +1

Query: 1   VKLGGTDVIASVKAELGRPNHLYPDRGNVSIYVDCSPTAAPMFEGRGGEELSAELSVALQ 180
           V+LG T++IASVKAELG+P+ L+PD+G VSI+VDCSPTA PMFEGRG EELSAELSV+LQ
Sbjct: 49  VRLGATEIIASVKAELGKPSILHPDKGKVSIFVDCSPTAEPMFEGRGSEELSAELSVSLQ 108

Query: 181 RCFLGGKSGAGAGINLSSLIVVEGKMCWDLYIDGLVISSDGNLLDALGAAIKAALSNTGI 360
           RC LGGKSGAGA I+LSSLIVVEGK+CWDLYIDGLV+SSDGNLLDAL AAIK ALS+TGI
Sbjct: 109 RCLLGGKSGAGAAIDLSSLIVVEGKVCWDLYIDGLVVSSDGNLLDALAAAIKVALSDTGI 168

Query: 361 PKVNVAVGAAADEEPEVDISDEEFLQFDTSGVPVIVTLTKVGRHYITDATLEEESQMSSA 540
           PKVNV+V AA+DEEPEVD+SDEEFLQFDTS VPVI+TLTKVGRHYI DAT EEESQMSSA
Sbjct: 169 PKVNVSVNAASDEEPEVDVSDEEFLQFDTSSVPVIITLTKVGRHYIVDATSEEESQMSSA 228

Query: 541 VSVSVDRHGHICGLTKRGGAGLDPSAILDMISVSKHVSEQLMAELDSKISAAEVDEAE 714
           VSVSV+R+G ICGLTKRGGAGLDPS I DMISV+KHVS+Q ++ LDS+I+AAE +EAE
Sbjct: 229 VSVSVNRNGQICGLTKRGGAGLDPSVIFDMISVAKHVSQQFISLLDSEIAAAEAEEAE 286


>gb|ACG32102.1| exosome complex exonuclease RRP42 [Zea mays]
           gi|413935080|gb|AFW69631.1| exosome complex exonuclease
           RRP42 isoform 1 [Zea mays] gi|413935081|gb|AFW69632.1|
           exosome complex exonuclease RRP42 isoform 2 [Zea mays]
           gi|413935082|gb|AFW69633.1| exosome complex exonuclease
           RRP42 isoform 3 [Zea mays] gi|413935083|gb|AFW69634.1|
           exosome complex exonuclease RRP42 isoform 4 [Zea mays]
          Length = 287

 Score =  384 bits (987), Expect = e-104
 Identities = 190/236 (80%), Positives = 217/236 (91%)
 Frame = +1

Query: 1   VKLGGTDVIASVKAELGRPNHLYPDRGNVSIYVDCSPTAAPMFEGRGGEELSAELSVALQ 180
           V+LG TD+IASVKAELG+P+ L+PD+G V+I+VDCSPTA P+FEGRG EELSAELSV+LQ
Sbjct: 49  VRLGATDIIASVKAELGKPSILHPDKGKVAIFVDCSPTAEPLFEGRGSEELSAELSVSLQ 108

Query: 181 RCFLGGKSGAGAGINLSSLIVVEGKMCWDLYIDGLVISSDGNLLDALGAAIKAALSNTGI 360
           RC LGGKSGAGA I+LSSLIVV+GK+CWDLYIDGLV+SSDGNLLDAL  AIK ALS+TGI
Sbjct: 109 RCLLGGKSGAGAAIDLSSLIVVDGKVCWDLYIDGLVVSSDGNLLDALAVAIKVALSDTGI 168

Query: 361 PKVNVAVGAAADEEPEVDISDEEFLQFDTSGVPVIVTLTKVGRHYITDATLEEESQMSSA 540
           PKVNV+V AA+DEEPEVD+SDEEFLQFDTSGVPVI+TLTKVGRHYI DAT EEESQMSSA
Sbjct: 169 PKVNVSVSAASDEEPEVDVSDEEFLQFDTSGVPVIITLTKVGRHYIVDATSEEESQMSSA 228

Query: 541 VSVSVDRHGHICGLTKRGGAGLDPSAILDMISVSKHVSEQLMAELDSKISAAEVDE 708
           VSVSV+RHG ICGLTKRGGAGLDPS I DMISV+KHVS+Q ++ LDS+I+AAE +E
Sbjct: 229 VSVSVNRHGQICGLTKRGGAGLDPSVIFDMISVAKHVSQQFISLLDSEIAAAEAEE 284