BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00009441
         (1127 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81292.1| hypothetical protein VITISV_005315 [Vitis vinifera]   470   e-130
ref|XP_004134713.1| PREDICTED: general transcription factor IIH ...   459   e-127
ref|XP_002519045.1| tfiih, polypeptide, putative [Ricinus commun...   454   e-125
ref|XP_004167674.1| PREDICTED: RNA polymerase II transcription f...   452   e-125
ref|XP_003637396.1| General transcription factor IIH subunit [Me...   447   e-123

>emb|CAN81292.1| hypothetical protein VITISV_005315 [Vitis vinifera]
          Length = 451

 Score =  470 bits (1209), Expect = e-130
 Identities = 236/302 (78%), Positives = 265/302 (87%)
 Frame = -1

Query: 908 MPQVKIIAKNFMDMVASLPAVKLDKLYDNTFICEAVLRSMPPLAKKYALQLLCIDGYVAA 729
           MPQVKIIAKNFMDMVASLPA+KLD LY NTFICEA+LRS+PPLAKKY LQ+L ID  V A
Sbjct: 1   MPQVKIIAKNFMDMVASLPAMKLDALYHNTFICEAILRSLPPLAKKYILQMLYIDVPVTA 60

Query: 728 KLMEVWVLPDGFSKHRVAIDRLVQLNVFQESIDRKKDSSYRLNPKFRNNLQKYLVHGGLL 549
           K ME WVL DGFSKHRVAIDRL+QL VF E+ DRKK++SYRLNP F+ NLQK+L++GG+L
Sbjct: 61  KAMEEWVLADGFSKHRVAIDRLIQLRVFTETSDRKKETSYRLNPTFQTNLQKHLIYGGVL 120

Query: 548 PREPMPSNITVRLPTLEELDGYALEQWECFLLQLISSSQAERPTNFSSSMMKNFQKGLLS 369
           PREPMPSNITVRLP+L++L+ YAL QWECFLLQLISS+Q E+ TNFSSS+MK FQ+GLL+
Sbjct: 121 PREPMPSNITVRLPSLDDLEAYALGQWECFLLQLISSTQTEKLTNFSSSLMKVFQRGLLT 180

Query: 368 QREKEAPRLTVNGFQFLLMDTNAQLWYIIREYISNSEDRGVDAADLISFLLELSFHVTGE 189
           QREKEAPRLT +GFQFLLMDTNAQLWYI+REYISNSE+RGVD ADLISFLLELSFHVTGE
Sbjct: 181 QREKEAPRLTESGFQFLLMDTNAQLWYIMREYISNSEERGVDPADLISFLLELSFHVTGE 240

Query: 188 AYNTNTLSDVQRSIIKDLADLGLVKLQQGRKESWFIPTKLVTNXXXXXXXXXSRIEGFVV 9
           AYN NTL++ QR+ IKDL DLGLVKLQQGRKESWFIPTKL TN         SR +GFVV
Sbjct: 241 AYNINTLTEFQRNTIKDLVDLGLVKLQQGRKESWFIPTKLATNLSMSLSDTSSRKQGFVV 300

Query: 8   VE 3
           VE
Sbjct: 301 VE 302


>ref|XP_004134713.1| PREDICTED: general transcription factor IIH subunit 4-like [Cucumis
           sativus]
          Length = 451

 Score =  459 bits (1181), Expect = e-127
 Identities = 230/302 (76%), Positives = 265/302 (87%)
 Frame = -1

Query: 908 MPQVKIIAKNFMDMVASLPAVKLDKLYDNTFICEAVLRSMPPLAKKYALQLLCIDGYVAA 729
           MPQVKIIAKNFMDMVASLPA+KLD+LY+N FICEA+LRS+PPLAKK+ LQ+L IDG V+A
Sbjct: 1   MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDGPVSA 60

Query: 728 KLMEVWVLPDGFSKHRVAIDRLVQLNVFQESIDRKKDSSYRLNPKFRNNLQKYLVHGGLL 549
           K ME WVLPDG SK++VA+DRL+QL VF E+ DRK++++YRLNP F+ NLQK L+HG +L
Sbjct: 61  KSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIHGEVL 120

Query: 548 PREPMPSNITVRLPTLEELDGYALEQWECFLLQLISSSQAERPTNFSSSMMKNFQKGLLS 369
            REPMPSNITVRLP+LE+L+ YAL+QWECFLLQLI+S QAE+P+N SSS+MK FQKGLLS
Sbjct: 121 AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLS 180

Query: 368 QREKEAPRLTVNGFQFLLMDTNAQLWYIIREYISNSEDRGVDAADLISFLLELSFHVTGE 189
           QR+KEAPRLT +GFQFLLM+TNAQLWYIIREYISN+E+RGVD ADLISFLLELSFHVTGE
Sbjct: 181 QRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGE 240

Query: 188 AYNTNTLSDVQRSIIKDLADLGLVKLQQGRKESWFIPTKLVTNXXXXXXXXXSRIEGFVV 9
           AY+ +TLSD QR  IKDLADLGLVKLQQGRKESWFIPTKL TN         SR  GFVV
Sbjct: 241 AYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKLGFVV 300

Query: 8   VE 3
           VE
Sbjct: 301 VE 302


>ref|XP_002519045.1| tfiih, polypeptide, putative [Ricinus communis]
           gi|223541708|gb|EEF43256.1| tfiih, polypeptide, putative
           [Ricinus communis]
          Length = 451

 Score =  454 bits (1167), Expect = e-125
 Identities = 227/302 (75%), Positives = 259/302 (85%)
 Frame = -1

Query: 908 MPQVKIIAKNFMDMVASLPAVKLDKLYDNTFICEAVLRSMPPLAKKYALQLLCIDGYVAA 729
           MPQV+IIAKNFMDMVASLPA+KLDKLY N FIC+A+LRS+PPLAKKY +Q+L IDG VA 
Sbjct: 1   MPQVRIIAKNFMDMVASLPAMKLDKLYTNPFICQAILRSLPPLAKKYVVQILYIDGPVAD 60

Query: 728 KLMEVWVLPDGFSKHRVAIDRLVQLNVFQESIDRKKDSSYRLNPKFRNNLQKYLVHGGLL 549
           K +E W+LPDG SKHRVAIDRL QL +F E +DRKK+ SY+LNP F+ NLQK+L+ GG+L
Sbjct: 61  KTLEEWLLPDGSSKHRVAIDRLTQLRIFTEIVDRKKEISYKLNPTFQTNLQKHLIDGGVL 120

Query: 548 PREPMPSNITVRLPTLEELDGYALEQWECFLLQLISSSQAERPTNFSSSMMKNFQKGLLS 369
           P EP+ SNI VRLPTLEELD YAL QWECFLL LI+S  AER TNFSSSMMK FQ+GLL+
Sbjct: 121 PGEPLASNIAVRLPTLEELDTYALGQWECFLLHLINSGHAERSTNFSSSMMKIFQRGLLT 180

Query: 368 QREKEAPRLTVNGFQFLLMDTNAQLWYIIREYISNSEDRGVDAADLISFLLELSFHVTGE 189
           QR+KEAPRLT +GFQFLLMDTNAQLWYIIREYISNSE+RG+D+ADLISFLLELSFH+TGE
Sbjct: 181 QRDKEAPRLTESGFQFLLMDTNAQLWYIIREYISNSEERGLDSADLISFLLELSFHITGE 240

Query: 188 AYNTNTLSDVQRSIIKDLADLGLVKLQQGRKESWFIPTKLVTNXXXXXXXXXSRIEGFVV 9
           AYN   L++ QR++IKDLADLGLVKLQQGRKESWFIPTKL TN         SR +GFVV
Sbjct: 241 AYNMIMLTEFQRNMIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLTDSSSRKQGFVV 300

Query: 8   VE 3
           VE
Sbjct: 301 VE 302


>ref|XP_004167674.1| PREDICTED: RNA polymerase II transcription factor B subunit 2-like,
           partial [Cucumis sativus]
          Length = 296

 Score =  452 bits (1163), Expect = e-125
 Identities = 222/283 (78%), Positives = 257/283 (90%)
 Frame = -1

Query: 908 MPQVKIIAKNFMDMVASLPAVKLDKLYDNTFICEAVLRSMPPLAKKYALQLLCIDGYVAA 729
           MPQVKIIAKNFMDMVASLPA+KLD+LY+N FICEA+LRS+PPLAKK+ LQ+L IDG V+A
Sbjct: 1   MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDGPVSA 60

Query: 728 KLMEVWVLPDGFSKHRVAIDRLVQLNVFQESIDRKKDSSYRLNPKFRNNLQKYLVHGGLL 549
           K ME WVLPDG SK++VA+DRL+QL VF E+ DRK++++YRLNP F+ NLQK L+HG +L
Sbjct: 61  KSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIHGEVL 120

Query: 548 PREPMPSNITVRLPTLEELDGYALEQWECFLLQLISSSQAERPTNFSSSMMKNFQKGLLS 369
            REPMPSNITVRLP+LE+L+ YAL+QWECFLLQLI+S QAE+P+N SSS+MK FQKGLLS
Sbjct: 121 AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLS 180

Query: 368 QREKEAPRLTVNGFQFLLMDTNAQLWYIIREYISNSEDRGVDAADLISFLLELSFHVTGE 189
           QR+KEAPRLT +GFQFLLM+TNAQLWYIIREYISN+E+RGVD ADLISFLLELSFHVTGE
Sbjct: 181 QRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGE 240

Query: 188 AYNTNTLSDVQRSIIKDLADLGLVKLQQGRKESWFIPTKLVTN 60
           AY+ +TLSD QR  IKDLADLGLVKLQQGRKESWFIPTKL TN
Sbjct: 241 AYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATN 283


>ref|XP_003637396.1| General transcription factor IIH subunit [Medicago truncatula]
           gi|355503331|gb|AES84534.1| General transcription factor
           IIH subunit [Medicago truncatula]
          Length = 451

 Score =  447 bits (1151), Expect = e-123
 Identities = 223/302 (73%), Positives = 256/302 (84%)
 Frame = -1

Query: 908 MPQVKIIAKNFMDMVASLPAVKLDKLYDNTFICEAVLRSMPPLAKKYALQLLCIDGYVAA 729
           MP+V+IIAKNFMDMVAS+P +KLDKLY+N FICEA+LRS+PPLAKKY LQL  IDG V A
Sbjct: 1   MPEVRIIAKNFMDMVASMPTIKLDKLYENGFICEAILRSLPPLAKKYVLQLFHIDGPVPA 60

Query: 728 KLMEVWVLPDGFSKHRVAIDRLVQLNVFQESIDRKKDSSYRLNPKFRNNLQKYLVHGGLL 549
           KL+  WVLPDG SKH+VAIDRLVQL VF E++D K   +Y++NP ++ +LQK LVHGG L
Sbjct: 61  KLLAEWVLPDGLSKHKVAIDRLVQLGVFVEALDSKNGKTYKVNPTYQRSLQKLLVHGGTL 120

Query: 548 PREPMPSNITVRLPTLEELDGYALEQWECFLLQLISSSQAERPTNFSSSMMKNFQKGLLS 369
           PRE MPSNITVRLPTLE+L+ YALEQWECFLLQLIS S  ++  N SSS+MK FQ+ LLS
Sbjct: 121 PRESMPSNITVRLPTLEDLETYALEQWECFLLQLISPSHVDKTLNISSSLMKVFQRRLLS 180

Query: 368 QREKEAPRLTVNGFQFLLMDTNAQLWYIIREYISNSEDRGVDAADLISFLLELSFHVTGE 189
           QR++EAP+LT +GFQFLLMDTNAQLWYIIREYI+NSE+RGVDA DLISF+LELSFHV GE
Sbjct: 181 QRDREAPKLTESGFQFLLMDTNAQLWYIIREYITNSEERGVDAGDLISFMLELSFHVIGE 240

Query: 188 AYNTNTLSDVQRSIIKDLADLGLVKLQQGRKESWFIPTKLVTNXXXXXXXXXSRIEGFVV 9
           AYN NTL++ QR+IIKDLADLGLVKLQQGRKESWFIPTKL TN         SR EGFVV
Sbjct: 241 AYNINTLTEFQRNIIKDLADLGLVKLQQGRKESWFIPTKLATNLSVSMTESSSRKEGFVV 300

Query: 8   VE 3
           VE
Sbjct: 301 VE 302