BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00007526
         (1534 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymeras...   434   e-119
emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]         434   e-119
emb|CAC95022.1| mitochondrial RNA polymerase [Nicotiana tabacum]      434   e-119
ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   431   e-118
emb|CAE52834.1| RNA polymerase [Hordeum vulgare]                      430   e-118

>sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymerase 1B, mitochondrial; AltName:
            Full=NictaRpoT1-tom; AltName: Full=T7 bacteriophage-type
            single subunit RNA polymerase 1B; Flags: Precursor
          Length = 1002

 Score =  434 bits (1115), Expect = e-119
 Identities = 212/252 (84%), Positives = 232/252 (92%), Gaps = 2/252 (0%)
 Frame = -1

Query: 1534 DAKKDPS-DPEAFRARLFVNHVDRKLVKQSVMTAVYGVTYIGARDQIRKRLKERGVL-DD 1361
            DA KDP+ DP   RARL +N VDRKLVKQ+VMT+VYGVTYIGARDQI+KRLKERGV+ DD
Sbjct: 751  DAAKDPANDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGVIEDD 810

Query: 1360 KDLFGASCYATKVTLTALGEMFQAARSIMSWLGDCAKLIASENYPVQWKTPLGLPVVQPY 1181
             +LF A+CYA K TLTALGEMF+AARSIMSWLGDCAK+IA EN+PV+W TPLGLPVVQPY
Sbjct: 811  NELFAAACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPY 870

Query: 1180 RKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKKAGLYF 1001
            RKLGRHLIKTSLQ+LTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACK++GL F
Sbjct: 871  RKLGRHLIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSF 930

Query: 1000 AGVHDSYWTHACDVDEMNKILREKFVELYEAPILEDLLGSFQQSFPAVTFPPLPERGDFD 821
            AGVHDSYWTHACDVD+MNKILREKFVELY+APILE+LL SFQQSFP + FPPLPERGDFD
Sbjct: 931  AGVHDSYWTHACDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFD 990

Query: 820  LSEVLKSTYFFN 785
            L EVL+S YFFN
Sbjct: 991  LREVLESPYFFN 1002


>emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]
          Length = 1002

 Score =  434 bits (1115), Expect = e-119
 Identities = 212/252 (84%), Positives = 232/252 (92%), Gaps = 2/252 (0%)
 Frame = -1

Query: 1534 DAKKDPS-DPEAFRARLFVNHVDRKLVKQSVMTAVYGVTYIGARDQIRKRLKERGVL-DD 1361
            DA KDP+ DP   RARL +N VDRKLVKQ+VMT+VYGVTYIGARDQI+KRLKERGV+ DD
Sbjct: 751  DAAKDPANDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGVIEDD 810

Query: 1360 KDLFGASCYATKVTLTALGEMFQAARSIMSWLGDCAKLIASENYPVQWKTPLGLPVVQPY 1181
             +LF A+CYA K TLTALGEMF+AARSIMSWLGDCAK+IA EN+PV+W TPLGLPVVQPY
Sbjct: 811  NELFAAACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPY 870

Query: 1180 RKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKKAGLYF 1001
            RKLGRHLIKTSLQ+LTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACK++GL F
Sbjct: 871  RKLGRHLIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSF 930

Query: 1000 AGVHDSYWTHACDVDEMNKILREKFVELYEAPILEDLLGSFQQSFPAVTFPPLPERGDFD 821
            AGVHDSYWTHACDVD+MNKILREKFVELY+APILE+LL SFQQSFP + FPPLPERGDFD
Sbjct: 931  AGVHDSYWTHACDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFD 990

Query: 820  LSEVLKSTYFFN 785
            L EVL+S YFFN
Sbjct: 991  LREVLESPYFFN 1002


>emb|CAC95022.1| mitochondrial RNA polymerase [Nicotiana tabacum]
          Length = 715

 Score =  434 bits (1115), Expect = e-119
 Identities = 212/252 (84%), Positives = 232/252 (92%), Gaps = 2/252 (0%)
 Frame = -1

Query: 1534 DAKKDPS-DPEAFRARLFVNHVDRKLVKQSVMTAVYGVTYIGARDQIRKRLKERGVL-DD 1361
            DA KDP+ DP   RARL +N VDRKLVKQ+VMT+VYGVTYIGARDQI+KRLKERGV+ DD
Sbjct: 464  DAAKDPANDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGVIEDD 523

Query: 1360 KDLFGASCYATKVTLTALGEMFQAARSIMSWLGDCAKLIASENYPVQWKTPLGLPVVQPY 1181
             +LF A+CYA K TLTALGEMF+AARSIMSWLGDCAK+IA EN+PV+W TPLGLPVVQPY
Sbjct: 524  NELFAAACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPY 583

Query: 1180 RKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKKAGLYF 1001
            RKLGRHLIKTSLQ+LTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACK++GL F
Sbjct: 584  RKLGRHLIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSF 643

Query: 1000 AGVHDSYWTHACDVDEMNKILREKFVELYEAPILEDLLGSFQQSFPAVTFPPLPERGDFD 821
            AGVHDSYWTHACDVD+MNKILREKFVELY+APILE+LL SFQQSFP + FPPLPERGDFD
Sbjct: 644  AGVHDSYWTHACDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFD 703

Query: 820  LSEVLKSTYFFN 785
            L EVL+S YFFN
Sbjct: 704  LREVLESPYFFN 715


>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
            [Vitis vinifera] gi|298204431|emb|CBI16911.3| unnamed
            protein product [Vitis vinifera]
          Length = 1035

 Score =  431 bits (1108), Expect = e-118
 Identities = 210/252 (83%), Positives = 233/252 (92%), Gaps = 2/252 (0%)
 Frame = -1

Query: 1534 DAKKDPSD-PEAFRARLFVNHVDRKLVKQSVMTAVYGVTYIGARDQIRKRLKERGVL-DD 1361
            DA+KDP+  P+A RAR+ +N VDRKLVKQ+VMT+VYGVTYIGARDQI++RLKER  + DD
Sbjct: 784  DAEKDPAIFPDALRARILINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERNAIADD 843

Query: 1360 KDLFGASCYATKVTLTALGEMFQAARSIMSWLGDCAKLIASENYPVQWKTPLGLPVVQPY 1181
             +LFGA+CYA K+TLTALGEMFQAARSIMSWLGDCAK+IASEN PV+W TPLGLPVVQPY
Sbjct: 844  VELFGAACYAAKITLTALGEMFQAARSIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPY 903

Query: 1180 RKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKKAGLYF 1001
            RKLGRHLIKTSLQVLTLQRET+ +MVKRQRTAFPPNFVHSLDGSHMMMTAIACKKAGL F
Sbjct: 904  RKLGRHLIKTSLQVLTLQRETETIMVKRQRTAFPPNFVHSLDGSHMMMTAIACKKAGLNF 963

Query: 1000 AGVHDSYWTHACDVDEMNKILREKFVELYEAPILEDLLGSFQQSFPAVTFPPLPERGDFD 821
            AGVHDSYWTHACDVDEMN++LREKFV+LYE PILE+LL SFQQSFPA+ FPPLPERGDFD
Sbjct: 964  AGVHDSYWTHACDVDEMNRLLREKFVQLYETPILENLLESFQQSFPALEFPPLPERGDFD 1023

Query: 820  LSEVLKSTYFFN 785
            L EVL+S YFFN
Sbjct: 1024 LREVLESPYFFN 1035


>emb|CAE52834.1| RNA polymerase [Hordeum vulgare]
          Length = 862

 Score =  430 bits (1106), Expect = e-118
 Identities = 209/252 (82%), Positives = 235/252 (93%), Gaps = 2/252 (0%)
 Frame = -1

Query: 1534 DAKKDPS-DPEAFRARLFVNHVDRKLVKQSVMTAVYGVTYIGARDQIRKRLKERGVL-DD 1361
            DA+KDP+ D +A RARL V+ VDR+LVKQ+VMT+VYGVTY+GAR+QI++RLKERGV+ DD
Sbjct: 611  DAQKDPAKDADAARARLLVDQVDRRLVKQTVMTSVYGVTYVGAREQIKRRLKERGVIADD 670

Query: 1360 KDLFGASCYATKVTLTALGEMFQAARSIMSWLGDCAKLIASENYPVQWKTPLGLPVVQPY 1181
             +LFGASCYA KVTLTALGEMF+AARSIM+WLGDCAK+IA EN PV+WKTPLGLPVVQPY
Sbjct: 671  SELFGASCYAAKVTLTALGEMFEAARSIMNWLGDCAKVIACENEPVRWKTPLGLPVVQPY 730

Query: 1180 RKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKKAGLYF 1001
            RKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTA+ACKK GLYF
Sbjct: 731  RKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKQGLYF 790

Query: 1000 AGVHDSYWTHACDVDEMNKILREKFVELYEAPILEDLLGSFQQSFPAVTFPPLPERGDFD 821
            AGVHDSYWTHACDVD MNKILREKFVELY+APILE+LL SF+ SFP + FPPLPERG+FD
Sbjct: 791  AGVHDSYWTHACDVDTMNKILREKFVELYDAPILENLLESFETSFPKLKFPPLPERGNFD 850

Query: 820  LSEVLKSTYFFN 785
            + +VL+STYFFN
Sbjct: 851  MKDVLQSTYFFN 862