BLASTX nr result

ID: Aconitum21_contig00006535 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00006535
         (935 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517309.1| ribosome biogenesis protein bms1, putative [...   474   e-131
ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 ...   467   e-129
emb|CBI17233.3| unnamed protein product [Vitis vinifera]              467   e-129
ref|XP_003539035.1| PREDICTED: ribosome biogenesis protein BMS1 ...   466   e-129
ref|XP_003540688.1| PREDICTED: ribosome biogenesis protein BMS1 ...   463   e-128

>ref|XP_002517309.1| ribosome biogenesis protein bms1, putative [Ricinus communis]
           gi|223543572|gb|EEF45102.1| ribosome biogenesis protein
           bms1, putative [Ricinus communis]
          Length = 825

 Score =  474 bits (1221), Expect = e-131
 Identities = 236/303 (77%), Positives = 252/303 (83%)
 Frame = +2

Query: 26  MAQPSGDGDQSHKTHRTHXXXXXXXXXXXXXXXXXXGSGDAPEEKRQNPKAFAFTSTNKA 205
           M   SG  +QSHK HR+                    S    EEK+QNPKAFAF S+ KA
Sbjct: 1   MGMDSGSKEQSHKVHRSRQAGPKKQAKSDKKKKTDDNS---TEEKKQNPKAFAFNSSVKA 57

Query: 206 KRLQSRATEKEQRRLHVPTIDRTTGEPAXXXXXXXXXXXXXKSLLIKSLVKHYTRHNLPE 385
           KRLQSRA EKEQRRLHVPTIDR+ GEPA             KSLLIKSLVKHYT+HNLPE
Sbjct: 58  KRLQSRAVEKEQRRLHVPTIDRSYGEPAPYVVLVHGPPQVGKSLLIKSLVKHYTKHNLPE 117

Query: 386 VRGPITIVSGKQRRVQFVECPNDINGMIDAAKFADIALLLIDGSYGFEMETFEFLNILQV 565
           VRGPITIVSGKQRRVQFVECPNDINGMIDAAKFAD+ALLLIDGSYGFEMETFEFLNILQV
Sbjct: 118 VRGPITIVSGKQRRVQFVECPNDINGMIDAAKFADLALLLIDGSYGFEMETFEFLNILQV 177

Query: 566 HGFPKVMGVLTHLDKFKDVKKLRKTKQRLKHRFWTEIYDGAKLFYLSGLIHGKYAKREVH 745
           HGFPKVMGVLTHLDKFKDVKKLRKTKQRLKHRFWTEIYDGAKLFYLSGLIHGKY +RE+H
Sbjct: 178 HGFPKVMGVLTHLDKFKDVKKLRKTKQRLKHRFWTEIYDGAKLFYLSGLIHGKYPRREIH 237

Query: 746 NLARFISVMKFHPLSWRAAHPYVLVDRFEDVTPPEKVHEDKKCNRNITLYGYLRGCNMKK 925
           NLARFISVMKFHPLSWR +HPYVLVDRFEDVTPPE+VH ++K +RN+TLYGYLRGCN+KK
Sbjct: 238 NLARFISVMKFHPLSWRTSHPYVLVDRFEDVTPPEQVHMNRKSDRNVTLYGYLRGCNLKK 297

Query: 926 GTK 934
           GTK
Sbjct: 298 GTK 300


>ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 homolog [Vitis
           vinifera]
          Length = 1139

 Score =  467 bits (1202), Expect = e-129
 Identities = 232/304 (76%), Positives = 253/304 (83%), Gaps = 1/304 (0%)
 Frame = +2

Query: 26  MAQPSGDGD-QSHKTHRTHXXXXXXXXXXXXXXXXXXGSGDAPEEKRQNPKAFAFTSTNK 202
           MA  SG GD Q H++HR+                      D  +EK+ NPKAFAF+S+ K
Sbjct: 1   MAGVSGTGDVQPHRSHRSRQSGPSAKKKSKSDKRKR----DISDEKKHNPKAFAFSSSVK 56

Query: 203 AKRLQSRATEKEQRRLHVPTIDRTTGEPAXXXXXXXXXXXXXKSLLIKSLVKHYTRHNLP 382
           AKRLQSRATEKEQRRLH+PTIDR+TGEPA             KSLLIKSLVKHYT+HNL 
Sbjct: 57  AKRLQSRATEKEQRRLHIPTIDRSTGEPAPYVVVVHGPPQVGKSLLIKSLVKHYTKHNLS 116

Query: 383 EVRGPITIVSGKQRRVQFVECPNDINGMIDAAKFADIALLLIDGSYGFEMETFEFLNILQ 562
           EVRGPITIVSGK RR+QFVECPNDINGMIDAAKFAD+ALLLIDGSYGFEMETFEFLNILQ
Sbjct: 117 EVRGPITIVSGKNRRLQFVECPNDINGMIDAAKFADLALLLIDGSYGFEMETFEFLNILQ 176

Query: 563 VHGFPKVMGVLTHLDKFKDVKKLRKTKQRLKHRFWTEIYDGAKLFYLSGLIHGKYAKREV 742
           VHGFPKVMGVLTHLDKFKD KKL+KTKQRLKHRFWTEIYDGAKLFYLSGL+HGKY KRE+
Sbjct: 177 VHGFPKVMGVLTHLDKFKDAKKLKKTKQRLKHRFWTEIYDGAKLFYLSGLVHGKYPKREI 236

Query: 743 HNLARFISVMKFHPLSWRAAHPYVLVDRFEDVTPPEKVHEDKKCNRNITLYGYLRGCNMK 922
           HNLARFISVMKFHPLSWRA+HPY+LVDRFEDVTPPE+V  + KC+RNITLYGYLRGCN+K
Sbjct: 237 HNLARFISVMKFHPLSWRASHPYILVDRFEDVTPPERVQLNNKCDRNITLYGYLRGCNLK 296

Query: 923 KGTK 934
           KGTK
Sbjct: 297 KGTK 300


>emb|CBI17233.3| unnamed protein product [Vitis vinifera]
          Length = 1305

 Score =  467 bits (1202), Expect = e-129
 Identities = 232/304 (76%), Positives = 253/304 (83%), Gaps = 1/304 (0%)
 Frame = +2

Query: 26  MAQPSGDGD-QSHKTHRTHXXXXXXXXXXXXXXXXXXGSGDAPEEKRQNPKAFAFTSTNK 202
           MA  SG GD Q H++HR+                      D  +EK+ NPKAFAF+S+ K
Sbjct: 1   MAGVSGTGDVQPHRSHRSRQSGPSAKKKSKSDKRKR----DISDEKKHNPKAFAFSSSVK 56

Query: 203 AKRLQSRATEKEQRRLHVPTIDRTTGEPAXXXXXXXXXXXXXKSLLIKSLVKHYTRHNLP 382
           AKRLQSRATEKEQRRLH+PTIDR+TGEPA             KSLLIKSLVKHYT+HNL 
Sbjct: 57  AKRLQSRATEKEQRRLHIPTIDRSTGEPAPYVVVVHGPPQVGKSLLIKSLVKHYTKHNLS 116

Query: 383 EVRGPITIVSGKQRRVQFVECPNDINGMIDAAKFADIALLLIDGSYGFEMETFEFLNILQ 562
           EVRGPITIVSGK RR+QFVECPNDINGMIDAAKFAD+ALLLIDGSYGFEMETFEFLNILQ
Sbjct: 117 EVRGPITIVSGKNRRLQFVECPNDINGMIDAAKFADLALLLIDGSYGFEMETFEFLNILQ 176

Query: 563 VHGFPKVMGVLTHLDKFKDVKKLRKTKQRLKHRFWTEIYDGAKLFYLSGLIHGKYAKREV 742
           VHGFPKVMGVLTHLDKFKD KKL+KTKQRLKHRFWTEIYDGAKLFYLSGL+HGKY KRE+
Sbjct: 177 VHGFPKVMGVLTHLDKFKDAKKLKKTKQRLKHRFWTEIYDGAKLFYLSGLVHGKYPKREI 236

Query: 743 HNLARFISVMKFHPLSWRAAHPYVLVDRFEDVTPPEKVHEDKKCNRNITLYGYLRGCNMK 922
           HNLARFISVMKFHPLSWRA+HPY+LVDRFEDVTPPE+V  + KC+RNITLYGYLRGCN+K
Sbjct: 237 HNLARFISVMKFHPLSWRASHPYILVDRFEDVTPPERVQLNNKCDRNITLYGYLRGCNLK 296

Query: 923 KGTK 934
           KGTK
Sbjct: 297 KGTK 300


>ref|XP_003539035.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Glycine max]
          Length = 1176

 Score =  466 bits (1199), Expect = e-129
 Identities = 230/300 (76%), Positives = 246/300 (82%), Gaps = 3/300 (1%)
 Frame = +2

Query: 44  DGDQSHKTHRTHXXXXXXXXXXXXXXXXXXGSGDA---PEEKRQNPKAFAFTSTNKAKRL 214
           D DQS+K+HRT                      DA    + K +NPKAFAFTS+NKAKRL
Sbjct: 5   DADQSNKSHRTRQSGAKTNKKKKTKKKQKQNPDDAGGLEDPKNRNPKAFAFTSSNKAKRL 64

Query: 215 QSRATEKEQRRLHVPTIDRTTGEPAXXXXXXXXXXXXXKSLLIKSLVKHYTRHNLPEVRG 394
           QSRA EKEQRRLHVP IDR+  EPA             KSLLIKSLVKHYT+HNLP+VRG
Sbjct: 65  QSRAVEKEQRRLHVPVIDRSYDEPAPYVVVVQGPPQVGKSLLIKSLVKHYTKHNLPDVRG 124

Query: 395 PITIVSGKQRRVQFVECPNDINGMIDAAKFADIALLLIDGSYGFEMETFEFLNILQVHGF 574
           PITIVSGKQRRVQFVECPNDINGMIDAAKFAD+ALLLIDGSYGFEMETFEFLNILQVHGF
Sbjct: 125 PITIVSGKQRRVQFVECPNDINGMIDAAKFADLALLLIDGSYGFEMETFEFLNILQVHGF 184

Query: 575 PKVMGVLTHLDKFKDVKKLRKTKQRLKHRFWTEIYDGAKLFYLSGLIHGKYAKREVHNLA 754
           PKVMGVLTHLDKFKD KKLRKTKQRLKHRFWTEIYDGAKLFYLSGLIHGKY KREVHNLA
Sbjct: 185 PKVMGVLTHLDKFKDAKKLRKTKQRLKHRFWTEIYDGAKLFYLSGLIHGKYVKREVHNLA 244

Query: 755 RFISVMKFHPLSWRAAHPYVLVDRFEDVTPPEKVHEDKKCNRNITLYGYLRGCNMKKGTK 934
           RFISVMKFHPLSWR +HPYV+VDRFED+TPPEKVH + KC+R +TLYGYLRGCN+K G K
Sbjct: 245 RFISVMKFHPLSWRTSHPYVMVDRFEDITPPEKVHANNKCDRKVTLYGYLRGCNLKMGNK 304


>ref|XP_003540688.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Glycine max]
          Length = 1181

 Score =  463 bits (1192), Expect = e-128
 Identities = 229/298 (76%), Positives = 245/298 (82%), Gaps = 1/298 (0%)
 Frame = +2

Query: 44  DGDQSHKTHRTHXXXXXXXXXXXXXXXXXXGSGDAPEE-KRQNPKAFAFTSTNKAKRLQS 220
           D DQS+K HRT                         E+ K+QNPKAFAF+S+NKAKRLQS
Sbjct: 5   DADQSNKAHRTRQSGAKTNKKKTKKKQKLNPDDVGGEDPKKQNPKAFAFSSSNKAKRLQS 64

Query: 221 RATEKEQRRLHVPTIDRTTGEPAXXXXXXXXXXXXXKSLLIKSLVKHYTRHNLPEVRGPI 400
           RA EKEQRRLHVP IDR+ GEPA             KSLLIKSLVKHYT+HNLP+VRGPI
Sbjct: 65  RAVEKEQRRLHVPVIDRSYGEPAPYVVVVQGPPQVGKSLLIKSLVKHYTKHNLPDVRGPI 124

Query: 401 TIVSGKQRRVQFVECPNDINGMIDAAKFADIALLLIDGSYGFEMETFEFLNILQVHGFPK 580
           TIVSGKQRRVQFVECPNDINGMIDAAKFAD+ALLLIDGSYGFEMETFEFLNILQVHGFPK
Sbjct: 125 TIVSGKQRRVQFVECPNDINGMIDAAKFADLALLLIDGSYGFEMETFEFLNILQVHGFPK 184

Query: 581 VMGVLTHLDKFKDVKKLRKTKQRLKHRFWTEIYDGAKLFYLSGLIHGKYAKREVHNLARF 760
           VMGVLTHLDKFKD KKLRKTKQRLKHRFWTEIYDGAKLFYLSGLIHGKY KREVHNLARF
Sbjct: 185 VMGVLTHLDKFKDAKKLRKTKQRLKHRFWTEIYDGAKLFYLSGLIHGKYVKREVHNLARF 244

Query: 761 ISVMKFHPLSWRAAHPYVLVDRFEDVTPPEKVHEDKKCNRNITLYGYLRGCNMKKGTK 934
           ISVMKFHPLSWR +H YV+VDRFED+TPPEKVH + KC+R +TLYGYLRGCN+K G K
Sbjct: 245 ISVMKFHPLSWRTSHSYVMVDRFEDITPPEKVHANNKCDRKVTLYGYLRGCNLKMGNK 302


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