BLASTX nr result

ID: Aconitum21_contig00006486 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00006486
         (658 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546472.1| PREDICTED: probable splicing factor 3A subun...   230   2e-58
ref|XP_003555946.1| PREDICTED: probable splicing factor 3A subun...   229   3e-58
ref|XP_003536628.1| PREDICTED: probable splicing factor 3A subun...   223   2e-56
ref|XP_003534698.1| PREDICTED: probable splicing factor 3A subun...   223   2e-56
ref|XP_002278479.1| PREDICTED: probable splicing factor 3A subun...   219   3e-55

>ref|XP_003546472.1| PREDICTED: probable splicing factor 3A subunit 1-like [Glycine max]
          Length = 802

 Score =  230 bits (587), Expect = 2e-58
 Identities = 123/195 (63%), Positives = 136/195 (69%), Gaps = 4/195 (2%)
 Frame = -1

Query: 574 MLGSXXXXXXXXXXADGNLGPLPASQVPENTPSNDXXXXXXXXXXXXTHTRTIGIIYPPP 395
           MLGS          +DGNLGPLP SQV E   +              THTRTIGII+PPP
Sbjct: 2   MLGSLPILPLPAPPSDGNLGPLPESQVIEEEQNQSNSASVPAPVTVATHTRTIGIIHPPP 61

Query: 394 DIRSIVDKTVQFVAKNGPDFERRIMSNNQGNAKFNFLNASDPYHAYYQHRLSEFRXXXXX 215
           DIR+IVDKT QFVAKNGP+FE+RI++NN GNAKFNFLN+SDPYHAYYQHRLSEFR     
Sbjct: 62  DIRTIVDKTAQFVAKNGPEFEKRIVANNTGNAKFNFLNSSDPYHAYYQHRLSEFRAQNQS 121

Query: 214 XXXXXXTAEAAIAPSTADDNESV----AAADTKPDPSAQFRPVRKVLEPPEAEQYTVRLP 47
                    AA+  S   D+  V    AAA  KPD SAQF+PVRKVLEPPEAEQYTVRLP
Sbjct: 122 SGQQQPADSAAVPESVPSDSNGVVAAAAAAAEKPDFSAQFKPVRKVLEPPEAEQYTVRLP 181

Query: 46  EGITGEEMDIIKLTA 2
           EGITGEE+DIIKLTA
Sbjct: 182 EGITGEELDIIKLTA 196


>ref|XP_003555946.1| PREDICTED: probable splicing factor 3A subunit 1-like isoform 1
           [Glycine max] gi|356575642|ref|XP_003555947.1|
           PREDICTED: probable splicing factor 3A subunit 1-like
           isoform 2 [Glycine max]
          Length = 798

 Score =  229 bits (585), Expect = 3e-58
 Identities = 122/193 (63%), Positives = 138/193 (71%), Gaps = 2/193 (1%)
 Frame = -1

Query: 574 MLGSXXXXXXXXXXADGNLGPLPASQVPENTPSNDXXXXXXXXXXXXTHTRTIGIIYPPP 395
           MLGS          +DGNLGPLP SQV E   +              THTRTIGII+PPP
Sbjct: 1   MLGSLPILPLPAPPSDGNLGPLPESQVIEEEQNKSNSASVPAPATVVTHTRTIGIIHPPP 60

Query: 394 DIRSIVDKTVQFVAKNGPDFERRIMSNNQGNAKFNFLNASDPYHAYYQHRLSEFR--XXX 221
           DIR+IVDKT QFVAKNGP+FE+RI++NN GN KFNFLN+SDPYHAYYQHRLSEFR     
Sbjct: 61  DIRTIVDKTSQFVAKNGPEFEKRIIANNTGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQS 120

Query: 220 XXXXXXXXTAEAAIAPSTADDNESVAAADTKPDPSAQFRPVRKVLEPPEAEQYTVRLPEG 41
                    A++A+  S  D N  VAAA+ KPD SAQF+PVRKVL+PPEAEQYTVRLPEG
Sbjct: 121 SGQQPPPQPADSAVPESAPDSNNGVAAAE-KPDVSAQFKPVRKVLDPPEAEQYTVRLPEG 179

Query: 40  ITGEEMDIIKLTA 2
           ITGEE+DIIKLTA
Sbjct: 180 ITGEELDIIKLTA 192


>ref|XP_003536628.1| PREDICTED: probable splicing factor 3A subunit 1-like [Glycine max]
          Length = 801

 Score =  223 bits (568), Expect = 2e-56
 Identities = 121/194 (62%), Positives = 136/194 (70%), Gaps = 3/194 (1%)
 Frame = -1

Query: 574 MLGSXXXXXXXXXXADGNLGPLPASQVPENTPSN-DXXXXXXXXXXXXTHTRTIGIIYPP 398
           MLGS          +DGNLGPLP SQV +N   N              THTRTIGII+PP
Sbjct: 1   MLGSLPILPLPAPPSDGNLGPLPESQVIDNEEQNKSNSVSVPAPATVATHTRTIGIIHPP 60

Query: 397 PDIRSIVDKTVQFVAKNGPDFERRIMSNNQGNAKFNFLNASDPYHAYYQHRLSEFR--XX 224
           PDIR+IVDKT QFVAKNGP+FE+RI++NN GN KFNFLN+SDPYHAYYQHRLSEFR    
Sbjct: 61  PDIRTIVDKTSQFVAKNGPEFEKRIIANNTGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQ 120

Query: 223 XXXXXXXXXTAEAAIAPSTADDNESVAAADTKPDPSAQFRPVRKVLEPPEAEQYTVRLPE 44
                     A++A+  S   D+  VAAA  K D SAQF+ VRKVLEPPEAEQYTVRLPE
Sbjct: 121 SSGLQPPSQPADSAVPESAPSDSNGVAAAAEKIDVSAQFKAVRKVLEPPEAEQYTVRLPE 180

Query: 43  GITGEEMDIIKLTA 2
           GITGEE+DIIKLTA
Sbjct: 181 GITGEELDIIKLTA 194


>ref|XP_003534698.1| PREDICTED: probable splicing factor 3A subunit 1-like [Glycine max]
          Length = 806

 Score =  223 bits (568), Expect = 2e-56
 Identities = 122/198 (61%), Positives = 135/198 (68%), Gaps = 7/198 (3%)
 Frame = -1

Query: 574 MLGSXXXXXXXXXXADGNLGPLPASQV---PENTPSNDXXXXXXXXXXXXTHTRTIGIIY 404
           MLGS          +DGNLGPLP SQV    E   +              THTRTIGII+
Sbjct: 2   MLGSLPILPLPAPPSDGNLGPLPESQVIDDNEEEQNKSNSASVPAPATVATHTRTIGIIH 61

Query: 403 PPPDIRSIVDKTVQFVAKNGPDFERRIMSNNQGNAKFNFLNASDPYHAYYQHRLSEFRXX 224
           PPPDIR+IVDKT QFVAKNGP+FE+RI++NN GN KFNFLN+SDPYHAYYQHRLSEFR  
Sbjct: 62  PPPDIRTIVDKTSQFVAKNGPEFEKRIIANNTGNVKFNFLNSSDPYHAYYQHRLSEFRAQ 121

Query: 223 XXXXXXXXXTAEAAIAPSTADDNESV----AAADTKPDPSAQFRPVRKVLEPPEAEQYTV 56
                       AA+  S   D+  V    AAA  KPD SAQF+PVRKVLEPPEAEQYTV
Sbjct: 122 NQSSGQQQPADSAAVPESVPSDSNGVVAAAAAAAEKPDFSAQFKPVRKVLEPPEAEQYTV 181

Query: 55  RLPEGITGEEMDIIKLTA 2
           RLPEGITGEE+DIIKLTA
Sbjct: 182 RLPEGITGEELDIIKLTA 199


>ref|XP_002278479.1| PREDICTED: probable splicing factor 3A subunit 1-like [Vitis
           vinifera]
          Length = 814

 Score =  219 bits (559), Expect = 3e-55
 Identities = 120/203 (59%), Positives = 138/203 (67%), Gaps = 12/203 (5%)
 Frame = -1

Query: 574 MLGSXXXXXXXXXXADGNLGPLPASQVP-----ENTPSNDXXXXXXXXXXXXTHTRTIGI 410
           MLG+          +DGNLGPLP SQ+      EN  + +            THTRTIGI
Sbjct: 1   MLGAFPILPLPAPPSDGNLGPLPLSQLQDQTTDENVETEEKNKVNSAPASVATHTRTIGI 60

Query: 409 IYPPPDIRSIVDKTVQFVAKNGPDFERRIMSNNQGNAKFNFLNASDPYHAYYQHRLSEFR 230
           I+PPPDIR+IVDKT QFVAKNGP+FE+RI++NN GNAKFNFLN SDPYHAYYQHRLSEFR
Sbjct: 61  IHPPPDIRNIVDKTAQFVAKNGPEFEKRIIANNAGNAKFNFLNGSDPYHAYYQHRLSEFR 120

Query: 229 -------XXXXXXXXXXXTAEAAIAPSTADDNESVAAADTKPDPSAQFRPVRKVLEPPEA 71
                               E+A +   AD++E+V     KPDPSAQF+PVRKVLEPPE 
Sbjct: 121 SQNQSSAQQPPSQPADSSAPESAPSAPHADNSETV----VKPDPSAQFKPVRKVLEPPET 176

Query: 70  EQYTVRLPEGITGEEMDIIKLTA 2
           EQYTVRLPEGITGEE+DIIKLTA
Sbjct: 177 EQYTVRLPEGITGEELDIIKLTA 199


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